RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.47□□□□□ -1.21
SMC3-202ENST00000462899 TAB2Q9NYJ8 693 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 SLC24A2Q9UI40 661 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 ITGB1BP2Q9UKP3 347 aa7.47□□□□□ -1.21
SMC3-202ENST00000462899 CCDC78A2IDD5 438 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 OR6C74A6NCV1 312 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 SLC9B1P1A6NJY1 282 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 C9J4A7 227 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 C19orf84I3L1E1 186 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 AGPSO00116 658 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 SOCS6O14544 535 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 GAPDHSO14556 408 aaPredicted RBP7.46□□□□□ -1.22
SMC3-202ENST00000462899 ZNF749O43361 778 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 HCRTR1O43613 425 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 DIAPH2O60879 1101 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 JRKO75564 520 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 SNRPB2P08579 225 aaKnown RBP7.46□□□□□ -1.22
SMC3-202ENST00000462899 CD48P09326 243 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 CBSLP0DN79 551 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 COX6B1P14854 86 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 ST6GAL1P15907 406 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 VCLP18206 1134 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 CAPN3P20807 821 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 CYP2A7P20853 494 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 CA4P22748 312 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 CCNCP24863 283 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 SSTR2P30874 369 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 CBSP35520 551 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 CD86P42081 329 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 ARCN1P48444 511 aaKnown RBP7.46□□□□□ -1.22
SMC3-202ENST00000462899 ZNF165P49910 485 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 ARSEP51690 589 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 KCNK10P57789 538 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 ADCY2Q08462 1091 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 ITKQ08881 620 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 AIMP2Q13155 320 aaKnown RBP7.46□□□□□ -1.22
SMC3-202ENST00000462899 GALNT3Q14435 633 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 KRT31Q15323 416 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 CDSNQ15517 529 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 TPD52L1Q16890 204 aaPredicted RBP7.46□□□□□ -1.22
SMC3-202ENST00000462899 BOLA3Q53S33 107 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 CDKAL1Q5VV42 579 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 PRAMEF13Q5VWM6 474 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 METRNLQ641Q3 311 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 CDHR3Q6ZTQ4 885 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 IRF2BP2Q7Z5L9 587 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 MRGPRGQ86SM5 289 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 CDH24Q86UP0 819 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 AMZ2Q86W34 360 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 TRAPPC5Q8IUR0 188 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 MMP21Q8N119 569 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 CNTD1Q8N815 330 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 RASGEF1AQ8N9B8 481 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 TEKT4Q8WW24 435 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 NACC2Q96BF6 587 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 TAAR6Q96RI8 345 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 MAGEE1Q9HCI5 957 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 SLC6A20Q9NP91 592 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 RAD18Q9NS91 495 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 SLC22A11Q9NSA0 550 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 RBM22Q9NW64 420 aaKnown RBP eCLIP7.46□□□□□ -1.22
SMC3-202ENST00000462899 SOHLH2Q9NX45 425 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 PSMD13Q9UNM6 376 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 PTRH2Q9Y3E5 179 aaKnown RBP7.46□□□□□ -1.22
SMC3-202ENST00000462899 ZNF711Q9Y462 761 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 CFAP20Q9Y6A4 193 aaKnown RBP7.46□□□□□ -1.22
SMC3-202ENST00000462899 DNMT3AQ9Y6K1 912 aaPredicted RBP7.46□□□□□ -1.22
SMC3-202ENST00000462899 AKAP6Q13023 2319 aa7.46□□□□□ -1.22
SMC3-202ENST00000462899 INTS1Q8N201 2190 aaKnown RBP7.46□□□□□ -1.22
SMC3-202ENST00000462899 E7EQ34 232 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 MATN2O00339 956 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 PES1O00541 588 aaKnown RBP7.45□□□□□ -1.22
SMC3-202ENST00000462899 AURKAO14965 403 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 KCNN4O15554 427 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 GPR39O43194 453 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 LDB2O43679 373 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 POP7O75817 140 aaKnown RBP7.45□□□□□ -1.22
SMC3-202ENST00000462899 PIRTP0C851 137 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 POLR2CP19387 275 aaPredicted RBP7.45□□□□□ -1.22
SMC3-202ENST00000462899 ITGAXP20702 1163 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 AGAP20933 346 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 GMPRP36959 345 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 FOLR3P41439 243 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 CA7P43166 264 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 PREPP48147 710 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 LMAN1P49257 510 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 ADORA2A-AS1P86434 159 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 CDC16Q13042 620 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 BECN1Q14457 450 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 ZFYVE27Q5T4F4 411 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 TIGD7Q6NT04 549 aaPredicted RBP7.45□□□□□ -1.22
SMC3-202ENST00000462899 FAM180AQ6UWF9 173 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 RPTNQ6XPR3 784 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 B4GALNT4Q76KP1 1039 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 VWA5B2Q8N398 1253 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.45□□□□□ -1.22
SMC3-202ENST00000462899 BCORP1Q8N888 145 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 NIPA2Q8N8Q9 360 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 DDHD1Q8NEL9 900 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 DNAJB14Q8TBM8 379 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms