RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 Q6ZVU0 165 aa16.35■□□□□ 0.21
CCDC43-202ENST00000457422 SLC29A1Q99808 456 aa16.35■□□□□ 0.21
CCDC43-202ENST00000457422 ASIC5Q9NY37 505 aa16.35■□□□□ 0.21
CCDC43-202ENST00000457422 B4GALT6Q9UBX8 382 aa16.35■□□□□ 0.21
CCDC43-202ENST00000457422 PCDHGB4Q9UN71 923 aa16.35■□□□□ 0.21
CCDC43-202ENST00000457422 PCDHGB5Q9Y5G0 923 aa16.35■□□□□ 0.21
CCDC43-202ENST00000457422 KANSL1LA0AUZ9 987 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 MOSPD3O75425 235 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 STK16O75716 305 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 UMPSP11172 480 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 PSMC3P17980 439 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 CCR7P32248 378 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 GGT5P36269 586 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 POLR2LP62875 67 aaKnown RBP16.34■□□□□ 0.21
CCDC43-202ENST00000457422 GK3PQ14409 553 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 KIAA0040Q15053 153 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 SLC2A7Q6PXP3 512 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 PAPD5Q8NDF8 572 aaKnown RBP16.34■□□□□ 0.21
CCDC43-202ENST00000457422 IRF7Q92985 503 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 USP7Q93009 1102 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 CIB1Q99828 191 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 BBS2Q9BXC9 721 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 SLC29A3Q9BZD2 475 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 AURKCQ9UQB9 309 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 SOBPA7XYQ1 873 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 FFAR3O14843 346 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 GPR42O15529 346 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 AHCYL1O43865 530 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 RFPL2O75678 378 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 ARHGEF15O94989 841 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 ZNF30P17039 623 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 FASP25445 335 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 VARSP26640 1264 aaKnown RBP16.34■□□□□ 0.21
CCDC43-202ENST00000457422 AOAHP28039 575 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 PRKCQQ04759 706 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 ELMSAN1Q6PJG2 1045 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 GDPD4Q6W3E5 623 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 ZBTB49Q6ZSB9 765 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 RTL10Q7L3V2 364 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 TRPV3Q8NET8 790 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 MYLIPQ8WY64 445 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 TMEM74Q96NL1 305 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 SPATA16Q9BXB7 569 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 IL23AQ9NPF7 189 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 SMOXQ9NWM0 555 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 NDUFA13Q9P0J0 144 aa16.34■□□□□ 0.21
CCDC43-202ENST00000457422 EIF3LQ9Y262 564 aaKnown RBP16.34■□□□□ 0.21
CCDC43-202ENST00000457422 PLXNA2O75051 1894 aa16.33■□□□□ 0.21
CCDC43-202ENST00000457422 SMIM31A0A1B0GVY4 71 aa16.33■□□□□ 0.21
CCDC43-202ENST00000457422 NUAK1O60285 661 aa16.33■□□□□ 0.21
CCDC43-202ENST00000457422 ULK1O75385 1050 aa16.33■□□□□ 0.21
CCDC43-202ENST00000457422 RSL1D1O76021 490 aaKnown RBP16.33■□□□□ 0.21
CCDC43-202ENST00000457422 FCGR1AP12314 374 aa16.33■□□□□ 0.21
CCDC43-202ENST00000457422 OXTRP30559 389 aa16.33■□□□□ 0.21
CCDC43-202ENST00000457422 RPIAP49247 311 aa16.33■□□□□ 0.21
CCDC43-202ENST00000457422 RPL38P63173 70 aaKnown RBP16.33■□□□□ 0.21
CCDC43-202ENST00000457422 BRAT1Q6PJG6 821 aa16.33■□□□□ 0.21
CCDC43-202ENST00000457422 KIAA0907Q7Z7F0 614 aaPredicted RBP16.33■□□□□ 0.21
CCDC43-202ENST00000457422 ADIPOR2Q86V24 386 aa16.33■□□□□ 0.21
CCDC43-202ENST00000457422 IFNEQ86WN2 208 aa16.33■□□□□ 0.21
CCDC43-202ENST00000457422 CARM1Q86X55 608 aa16.33■□□□□ 0.21
CCDC43-202ENST00000457422 PROSER1Q86XN7 944 aa16.33■□□□□ 0.21
CCDC43-202ENST00000457422 TCAIMQ8N3R3 496 aa16.33■□□□□ 0.21
CCDC43-202ENST00000457422 OR2A12Q8NGT7 310 aa16.33■□□□□ 0.21
CCDC43-202ENST00000457422 BEGAINQ9BUH8 593 aa16.33■□□□□ 0.21
CCDC43-202ENST00000457422 SLC12A9Q9BXP2 914 aa16.33■□□□□ 0.21
CCDC43-202ENST00000457422 MRPS26Q9BYN8 205 aaKnown RBP16.33■□□□□ 0.21
CCDC43-202ENST00000457422 SPHK2Q9NRA0 654 aa16.33■□□□□ 0.21
CCDC43-202ENST00000457422 TDP1Q9NUW8 608 aa16.33■□□□□ 0.21
CCDC43-202ENST00000457422 PKD2L2Q9NZM6 624 aa16.33■□□□□ 0.21
CCDC43-202ENST00000457422 CD84Q9UIB8 345 aa16.33■□□□□ 0.21
CCDC43-202ENST00000457422 TMPRSS11EQ9UL52 423 aa16.33■□□□□ 0.21
CCDC43-202ENST00000457422 PADI4Q9UM07 663 aa16.33■□□□□ 0.21
CCDC43-202ENST00000457422 PDE10AQ9Y233 779 aa16.33■□□□□ 0.21
CCDC43-202ENST00000457422 LZTS1Q9Y250 596 aa16.33■□□□□ 0.21
CCDC43-202ENST00000457422 RNF11Q9Y3C5 154 aa16.33■□□□□ 0.21
CCDC43-202ENST00000457422 NOTCH4Q99466 2003 aa16.33■□□□□ 0.2
CCDC43-202ENST00000457422 LOC730098B7Z3J9 87 aa16.33■□□□□ 0.2
CCDC43-202ENST00000457422 C8GP07360 202 aa16.33■□□□□ 0.2
CCDC43-202ENST00000457422 MPC1LP0DKB6 136 aa16.33■□□□□ 0.2
CCDC43-202ENST00000457422 MTHFD1P11586 935 aaKnown RBP16.33■□□□□ 0.2
CCDC43-202ENST00000457422 SLC2A4P14672 509 aa16.33■□□□□ 0.2
CCDC43-202ENST00000457422 CKMT2P17540 419 aa16.33■□□□□ 0.2
CCDC43-202ENST00000457422 PWP1Q13610 501 aa16.33■□□□□ 0.2
CCDC43-202ENST00000457422 ARHGEF7Q14155 803 aa16.33■□□□□ 0.2
CCDC43-202ENST00000457422 ISLR2Q6UXK2 745 aa16.33■□□□□ 0.2
CCDC43-202ENST00000457422 DET1Q7L5Y6 550 aa16.33■□□□□ 0.2
CCDC43-202ENST00000457422 MFSD2AQ8NA29 543 aa16.33■□□□□ 0.2
CCDC43-202ENST00000457422 GLB1L3Q8NCI6 653 aaPredicted RBP16.33■□□□□ 0.2
CCDC43-202ENST00000457422 NUDT8Q8WV74 236 aa16.33■□□□□ 0.2
CCDC43-202ENST00000457422 CENPNQ96H22 339 aaPredicted RBP16.33■□□□□ 0.2
CCDC43-202ENST00000457422 CGREF1Q99674 301 aa16.33■□□□□ 0.2
CCDC43-202ENST00000457422 LINC00597Q9H2U6 94 aa16.33■□□□□ 0.2
CCDC43-202ENST00000457422 SLC32A1Q9H598 525 aa16.33■□□□□ 0.2
CCDC43-202ENST00000457422 PIDD1Q9HB75 910 aa16.33■□□□□ 0.2
CCDC43-202ENST00000457422 C8orf4Q9NR00 106 aa16.33■□□□□ 0.2
CCDC43-202ENST00000457422 FARSBQ9NSD9 589 aaKnown RBP16.33■□□□□ 0.2
CCDC43-202ENST00000457422 KLQ9UEF7 1012 aa16.33■□□□□ 0.2
CCDC43-202ENST00000457422 MBD1Q9UIS9 605 aaPredicted RBP16.33■□□□□ 0.2
CCDC43-202ENST00000457422 PCDHB3Q9Y5E6 796 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms