RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 TMEM151BQ8IW70 566 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 CLYBLQ8N0X4 340 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 D2HGDHQ8N465 521 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 AVL9Q8NBF6 648 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 TMEM52Q8NDY8 209 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 TAS1R2Q8TE23 839 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 CPT1BQ92523 772 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 HDAC10Q969S8 669 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 ZDHHC12Q96GR4 267 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 HSFY1Q96LI6 401 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 GPR137Q96N19 417 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 HERPUD2Q9BSE4 406 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 SPON2Q9BUD6 331 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 SLC6A20Q9NP91 592 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 KCNJ16Q9NPI9 418 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 PANK4Q9NVE7 773 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 KLHL14Q9P2G3 628 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 CNOT8Q9UFF9 292 aaKnown RBP3.16□□□□□ -1.9
PMS1-215ENST00000447232 PPT2Q9UMR5 302 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 ATP8A1Q9Y2Q0 1164 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 USF3Q68DE3 2245 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 FAM90A27PA6NNH2 459 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 CLDN4O14493 209 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 LDB2O43679 373 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 RHOBTB3O94955 611 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 ZNF205O95201 554 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 ERBB2P04626 1255 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 UMODP07911 640 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 XPAP23025 273 aaPredicted RBP3.16□□□□□ -1.9
PMS1-215ENST00000447232 OR1E1P30953 314 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 ZNF165P49910 485 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 PPP1CAP62136 330 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 GNA12Q03113 381 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 POLD3Q15054 466 aaPredicted RBP3.16□□□□□ -1.9
PMS1-215ENST00000447232 PTCHD3Q3KNS1 767 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 KRTCAP3Q53RY4 240 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 ERAP2Q6P179 960 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 GALNT18Q6P9A2 607 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 LCLAT1Q6UWP7 414 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 LINC00696Q6ZRV3 163 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 TFAP2DQ7Z6R9 452 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 TAB3Q8N5C8 712 aaPredicted RBP3.16□□□□□ -1.9
PMS1-215ENST00000447232 ANKRD20A12PQ8NF67 263 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 OR2Y1Q8NGV0 311 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 TMEM174Q8WUU8 243 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 HAS2Q92819 552 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 FAM149B1Q96BN6 582 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 EEF2KMTQ96G04 330 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 COQ10AQ96MF6 247 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 GDAP1L1Q96MZ0 367 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 IMPG2Q9BZV3 1241 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 TTYH3Q9C0H2 523 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 LHPPQ9H008 270 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 MIS12Q9H081 205 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 DMRT3Q9NQL9 472 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 GFOD1Q9NXC2 390 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 ARMCX1Q9P291 453 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 APEX2Q9UBZ4 518 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 FBXL4Q9UKA2 621 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 RNF6Q9Y252 685 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 GPR55Q9Y2T6 319 aaPredicted RBP3.16□□□□□ -1.9
PMS1-215ENST00000447232 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.16□□□□□ -1.9
PMS1-215ENST00000447232 PCYT1BQ9Y5K3 369 aaPredicted RBP3.16□□□□□ -1.9
PMS1-215ENST00000447232 CPAMD8Q8IZJ3 1885 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 ABCA1O95477 2261 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 OR5K4A6NMS3 321 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 C9J4A7 227 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 EXOC3O60645 756 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 CNOT3O75175 753 aaKnown RBP3.15□□□□□ -1.9
PMS1-215ENST00000447232 ALOX12BO75342 701 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 SOD1P00441 154 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 ELFN1P0C7U0 828 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 FAM157CP0CG43 387 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 PYGMP11217 842 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 SLC2A4P14672 509 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 ZNF30P17039 623 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 AMD1P17707 334 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 XRCC1P18887 633 aaPredicted RBP3.15□□□□□ -1.9
PMS1-215ENST00000447232 LONP1P36776 959 aaKnown RBP3.15□□□□□ -1.9
PMS1-215ENST00000447232 GEMIN4P57678 1058 aaKnown RBP3.15□□□□□ -1.9
PMS1-215ENST00000447232 HSD11B2P80365 405 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 RAD51Q06609 339 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 GPR19Q15760 415 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 CYP2A13Q16696 494 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 RILPL1Q5EBL4 403 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 OTUD1Q5VV17 481 aaPredicted RBP3.15□□□□□ -1.9
PMS1-215ENST00000447232 BRAT1Q6PJG6 821 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 C3P1Q6ZMU1 363 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 ZNF354CQ86Y25 554 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 EID3Q8N140 333 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 MYRIPQ8NFW9 859 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 MZB1Q8WU39 189 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 EAF1Q96JC9 268 aaPredicted RBP3.15□□□□□ -1.9
PMS1-215ENST00000447232 PWWP2AQ96N64 755 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 PLEKHG4BQ96PX9 1271 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 ZSWIM1Q9BR11 485 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 TRIM62Q9BVG3 475 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 POPDC2Q9HBU9 364 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 DMAC2Q9NW81 257 aa3.15□□□□□ -1.9
PMS1-215ENST00000447232 MPP6Q9NZW5 540 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms