RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 MYADMQ96S97 322 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 HPS4Q9NQG7 708 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 TRIOBPQ9H2D6 2365 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 LRATO95237 230 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 PREPP48147 710 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 TMEM259Q4ZIN3 620 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 RABEPKQ7Z6M1 372 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 PACS2Q86VP3 889 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 DTX3LQ8TDB6 740 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 RLN3Q8WXF3 142 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 KCNJ9Q92806 393 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 KCNK12Q9HB15 430 aa13.85□□□□□ -0.19
SMARCA4-204ENST00000444061 RABIFP47224 123 aa13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 CCR4P51679 360 aa13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 SQLEQ14534 574 aa13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 ZNF542PQ5EBM4 170 aa13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 RBM20Q5T481 1227 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 TRNP1Q6NT89 227 aa13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 TSPAN33Q86UF1 283 aa13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 ARHGAP12Q8IWW6 846 aa13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 DPYSL5Q9BPU6 564 aa13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 ARMCX1Q9P291 453 aa13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 CRTC1Q6UUV9 634 aa13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 CAND1Q86VP6 1230 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 TMEM245Q9H330 911 aa13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 ACSS2Q9NR19 701 aa13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 MTMR10Q9NXD2 777 aa13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 CXorf49A8MYA2 514 aaPredicted RBP13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 TYRP1P17643 537 aa13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 MPSTP25325 297 aa13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 CCR8P51685 355 aa13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 HYAL1Q12794 435 aa13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 ARMC3Q5W041 872 aa13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 KRT73Q86Y46 540 aa13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 DEFB107AQ8IZN7 70 aa13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 GJD3Q8N144 294 aa13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 TMIEQ8NEW7 156 aa13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 BTN2A2Q8WVV5 523 aa13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 MARK4Q96L34 752 aa13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 EFCAB11Q9BUY7 163 aa13.84□□□□□ -0.19
SMARCA4-204ENST00000444061 OR4F21O95013 312 aa13.83□□□□□ -0.19
SMARCA4-204ENST00000444061 KCNH1O95259 989 aa13.83□□□□□ -0.19
SMARCA4-204ENST00000444061 MLLT3P42568 568 aaPredicted RBP13.83□□□□□ -0.19
SMARCA4-204ENST00000444061 BDKRB1P46663 353 aa13.83□□□□□ -0.19
SMARCA4-204ENST00000444061 AVPR1BP47901 424 aa13.83□□□□□ -0.19
SMARCA4-204ENST00000444061 GRIN2CQ14957 1233 aa13.83□□□□□ -0.19
SMARCA4-204ENST00000444061 EME1Q96AY2 570 aa13.83□□□□□ -0.19
SMARCA4-204ENST00000444061 LENG8Q96PV6 779 aaPredicted RBP13.83□□□□□ -0.19
SMARCA4-204ENST00000444061 CPEB1Q9BZB8 566 aaKnown RBP13.83□□□□□ -0.19
SMARCA4-204ENST00000444061 PNPOQ9NVS9 261 aa13.83□□□□□ -0.19
SMARCA4-204ENST00000444061 PRKAG3Q9UGI9 489 aa13.83□□□□□ -0.19
SMARCA4-204ENST00000444061 POLR3HQ9Y535 204 aaPredicted RBP13.83□□□□□ -0.19
SMARCA4-204ENST00000444061 KNL1Q8NG31 2342 aa13.83□□□□□ -0.19
SMARCA4-204ENST00000444061 A8MU76 341 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 F7P08709 466 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 IDO1P14902 403 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 ARL13AQ5H913 290 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 SWT1Q5T5J6 900 aaKnown RBP13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 LYSMD4Q5XG99 296 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 TTLQ8NG68 377 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 DNASE1L2Q92874 299 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 RANBP9Q96S59 729 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 GATA5Q9BWX5 397 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 ROGDIQ9GZN7 287 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 TBC1D17Q9HA65 648 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 SLCO1B3Q9NPD5 702 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 KRCC1Q9NPI7 259 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 GPR34Q9UPC5 381 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 AP3M1Q9Y2T2 418 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 IL12RB1P42701 662 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 CRATP43155 626 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 ALDH6A1Q02252 535 aaKnown RBP13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 TOMM20Q15388 145 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 PLEKHS1Q5SXH7 462 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 PIM3Q86V86 326 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 SPPL2AQ8TCT8 520 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 VPS33AQ96AX1 596 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 LEF1Q9UJU2 399 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 CDC14AQ9UNH5 594 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 PRAMEF26H0Y7S4 382 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 GFRA2O00451 464 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 CAPN1P07384 714 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 VARSP26640 1264 aaKnown RBP13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 NUDT1P36639 197 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 ASMTP46597 345 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 CLK3P49761 638 aaKnown RBP13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 MAPK12P53778 367 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 ZNF77Q15935 545 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 PRSS58Q8IYP2 241 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 EEF1AKMT1Q8WVE0 214 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 FIG4Q92562 907 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 NSMCE2Q96MF7 247 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 GPR22Q99680 433 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 C3orf14Q9HBI5 128 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 TAC3Q9UHF0 121 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 DOCK3Q8IZD9 2030 aa13.83□□□□□ -0.2
SMARCA4-204ENST00000444061 KLHL33A6NCF5 533 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 SEMA3AQ14563 771 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 ANXA8L1Q5VT79 327 aa13.82□□□□□ -0.2
SMARCA4-204ENST00000444061 C2CD4AQ8NCU7 369 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms