RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 SNX7Q9UNH6 387 aa11.89□□□□□ -0.51
NEK1-201ENST00000439128 ZNF840PA6NDX5 716 aa11.89□□□□□ -0.51
NEK1-201ENST00000439128 IGLON5A6NGN9 336 aa11.89□□□□□ -0.51
NEK1-201ENST00000439128 C2orf74A8MZ97 194 aa11.89□□□□□ -0.51
NEK1-201ENST00000439128 SLC7A4O43246 635 aa11.89□□□□□ -0.51
NEK1-201ENST00000439128 CHRNB2P17787 502 aa11.89□□□□□ -0.51
NEK1-201ENST00000439128 EFNA1P20827 205 aaPredicted RBP11.89□□□□□ -0.51
NEK1-201ENST00000439128 FGL2Q14314 439 aa11.89□□□□□ -0.51
NEK1-201ENST00000439128 GPR141Q7Z602 305 aa11.89□□□□□ -0.51
NEK1-201ENST00000439128 AADATQ8N5Z0 425 aa11.89□□□□□ -0.51
NEK1-201ENST00000439128 MAGEE2Q8TD90 523 aaPredicted RBP11.89□□□□□ -0.51
NEK1-201ENST00000439128 SMPDL3AQ92484 453 aa11.89□□□□□ -0.51
NEK1-201ENST00000439128 FCRL5Q96RD9 977 aa11.89□□□□□ -0.51
NEK1-201ENST00000439128 KLHL4Q9C0H6 718 aa11.89□□□□□ -0.51
NEK1-201ENST00000439128 DOT1LQ8TEK3 1739 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 ANKRD26Q9UPS8 1709 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 TRIM43BA6NCK2 446 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 HDAC3O15379 428 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 OR4F21O95013 312 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 TGFB1P01137 390 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 FHP07954 510 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 ABHD2P08910 425 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 THEGLP0DJG4 465 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 MPIP34949 423 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 SOX4Q06945 474 aaPredicted RBP11.88□□□□□ -0.51
NEK1-201ENST00000439128 SPATA19Q7Z5L4 167 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 TMEM110Q86TL2 294 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 BHLHE22Q8NFJ8 381 aaPredicted RBP11.88□□□□□ -0.51
NEK1-201ENST00000439128 OR10T2Q8NGX3 314 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 TWIST2Q8WVJ9 160 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 SLC35G5Q96KT7 338 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 TOX2Q96NM4 488 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 TEFMQ96QE5 360 aaKnown RBP11.88□□□□□ -0.51
NEK1-201ENST00000439128 HIST1H2AAQ96QV6 131 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 MECRQ9BV79 373 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 HCFC1R1Q9NWW0 138 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 SIT1Q9Y3P8 196 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 MYOM1P52179 1685 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 PTGES3LE9PB15 166 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 HAS3O00219 553 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 ALOX15BO15296 676 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 GJA8P48165 433 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 JAM2P57087 298 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 MBOAT1Q6ZNC8 495 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 OAFQ86UD1 273 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 HEATR4Q86WZ0 1026 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 NUDT13Q86X67 352 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 SVOPQ8N4V2 548 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 OR6Y1Q8NGX8 325 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 C19orf60Q96EN9 201 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 MMABQ96EY8 250 aaPredicted RBP11.88□□□□□ -0.51
NEK1-201ENST00000439128 OLFM1Q99784 485 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 EPS8L2Q9H6S3 715 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 SDHAF3Q9NRP4 125 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 ANKRD66B4E2M5 251 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 H3BQF6 201 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 FGFR3P22607 806 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 OTX2P32243 289 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 GRIA3P42263 894 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 PPIDQ08752 370 aaKnown RBP11.88□□□□□ -0.51
NEK1-201ENST00000439128 HKDC1Q2TB90 917 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 GALNT18Q6P9A2 607 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 RGMAQ96B86 450 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 GFM1Q96RP9 751 aaKnown RBP11.88□□□□□ -0.51
NEK1-201ENST00000439128 TUBGCP5Q96RT8 1024 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 WASF2Q9Y6W5 498 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 DUOX1Q9NRD9 1551 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 MID1O15344 667 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 NIPSNAP2O75323 286 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 SRPRAP08240 638 aaKnown RBP11.88□□□□□ -0.51
NEK1-201ENST00000439128 EDNRBP24530 442 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 IL23RQ5VWK5 629 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 RANBP3LQ86VV4 465 aaPredicted RBP11.88□□□□□ -0.51
NEK1-201ENST00000439128 SLC35F5Q8WV83 523 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 TRNT1Q96Q11 434 aaKnown RBP11.88□□□□□ -0.51
NEK1-201ENST00000439128 TRMOQ9BU70 441 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 NOL6Q9H6R4 1146 aaKnown RBP11.88□□□□□ -0.51
NEK1-201ENST00000439128 TMEM248Q9NWD8 314 aa11.88□□□□□ -0.51
NEK1-201ENST00000439128 SAMHD1Q9Y3Z3 626 aaKnown RBP11.88□□□□□ -0.51
NEK1-201ENST00000439128 OR6C74A6NCV1 312 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 FAM86C2PA6NEL3 165 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 ZNF726A6NNF4 738 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 NPC1O15118 1278 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 IL7RP16871 459 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 ETV3P41162 512 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 VSX2P58304 361 aaPredicted RBP11.87□□□□□ -0.51
NEK1-201ENST00000439128 BST1Q10588 318 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 EIF4HQ15056 248 aaKnown RBP11.87□□□□□ -0.51
NEK1-201ENST00000439128 CARTPTQ16568 116 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 PPM1JQ5JR12 505 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 SLC39A4Q6P5W5 647 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 DHDDSQ86SQ9 333 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 MPP5Q8N3R9 675 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 ZNF527Q8NB42 609 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 OR2T3Q8NH03 318 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 CALML5Q9NZT1 146 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 NOCTQ9UK39 431 aaKnown RBP11.87□□□□□ -0.51
NEK1-201ENST00000439128 CFL2Q9Y281 166 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 TPRKBQ9Y3C4 175 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 GABRDO14764 452 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms