RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 GCAP28676 217 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 SSR2P43308 183 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 MAGEA8P43361 318 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 RGS21Q2M5E4 152 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 ZNF805Q5CZA5 627 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 LIPMQ5VYY2 423 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 OR52E8Q6IFG1 317 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 LRRC69Q6ZNQ3 347 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 GAREM2Q75VX8 874 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 CAND1Q86VP6 1230 aaKnown RBP10.48□□□□□ -0.73
TCOF1-204ENST00000427724 KIAA1551Q9HCM1 1747 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.48□□□□□ -0.73
TCOF1-204ENST00000427724 AGXTP21549 392 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 CTHP32929 405 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 GMPRP36959 345 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 PSME3P61289 254 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 CACNG1Q06432 222 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 TBC1D25Q3MII6 688 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 TJAP1Q5JTD0 557 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 LRRC66Q68CR7 880 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 CAPN13Q6MZZ7 669 aaPredicted RBP10.48□□□□□ -0.73
TCOF1-204ENST00000427724 DNAJC14Q6Y2X3 702 aaPredicted RBP10.48□□□□□ -0.73
TCOF1-204ENST00000427724 TMPRSS11BQ86T26 416 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 DHFR2Q86XF0 187 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 CEP19Q96LK0 163 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 TEKT5Q96M29 485 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 MYADMQ96S97 322 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 SEPHS2Q99611 448 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 CXCL16Q9H2A7 254 aa10.48□□□□□ -0.73
TCOF1-204ENST00000427724 MYOCOSA0A1B0GUC4 107 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 CHURC1-FNTBB4DL54 471 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 MAGEB3O15480 346 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 LDB2O43679 373 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 HS6ST1O60243 411 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 VIPR1P32241 457 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 FNTBP49356 437 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 SFT2D3Q587I9 215 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 TNFAIP8L3Q5GJ75 292 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 PQLC3Q8N755 202 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 OR4E2Q8NGC2 313 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 OR56A4Q8NGH8 313 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 RP9Q8TA86 221 aaKnown RBP10.47□□□□□ -0.73
TCOF1-204ENST00000427724 TSACCQ96A04 125 aaPredicted RBP10.47□□□□□ -0.73
TCOF1-204ENST00000427724 ZNF514Q96K75 400 aaPredicted RBP10.47□□□□□ -0.73
TCOF1-204ENST00000427724 SLC22A12Q96S37 553 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 MRGBPQ9NV56 204 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 HCN2Q9UL51 889 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 GPR34Q9UPC5 381 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 CCL26Q9Y258 94 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 CUL9Q8IWT3 2517 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 A0A087WXM4 84 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 TMEM114B3SHH9 223 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 E7ESA3 106 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 H3BSA7 217 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 GRID2O43424 1007 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 LILRB3O75022 631 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 RFPL1O75677 317 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 CHRNGP07510 517 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 ITGB8P26012 769 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 MAPK1P28482 360 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 CMPK1P30085 196 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 GUCA1AP43080 201 aaPredicted RBP10.47□□□□□ -0.73
TCOF1-204ENST00000427724 ARCN1P48444 511 aaKnown RBP10.47□□□□□ -0.73
TCOF1-204ENST00000427724 CSNK1EP49674 416 aaKnown RBP10.47□□□□□ -0.73
TCOF1-204ENST00000427724 ANXA11P50995 505 aaKnown RBP10.47□□□□□ -0.73
TCOF1-204ENST00000427724 ZNF33AQ06730 810 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 ADAMTSL2Q86TH1 951 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 MIER2Q8N344 545 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 CAPSLQ8WWF8 208 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 SIGLEC10Q96LC7 697 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 WDR92Q96MX6 357 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 ANKRD6Q9Y2G4 727 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 VWA7Q9Y334 891 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 PSAT1Q9Y617 370 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 CLOCKO15516 846 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 CYP17A1P05093 508 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 HLA-DQB2P05538 268 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 C5AR1P21730 350 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 MASP1P48740 699 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 HYAL1Q12794 435 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 LDLRAP1Q5SW96 308 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 EGFLAMQ63HQ2 1017 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 TMEM198Q66K66 360 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 FAM45BPQ6NSW5 357 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 TSSK4Q6SA08 328 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 GK5Q6ZS86 529 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 SLC22A9Q8IVM8 553 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 CCDC103Q8IW40 242 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.47□□□□□ -0.739e-8■□□□□ 9.8
TCOF1-204ENST00000427724 CLYBLQ8N0X4 340 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 PHTF2Q8N3S3 785 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 TTC29Q8NA56 475 aaPredicted RBP10.47□□□□□ -0.73
TCOF1-204ENST00000427724 ZBTB8BQ8NAP8 495 aaPredicted RBP10.47□□□□□ -0.73
TCOF1-204ENST00000427724 TMEM145Q8NBT3 493 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 OR13C4Q8NGS5 318 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 FAM45AQ8TCE6 357 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 QRFPRQ96P65 431 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 RBBP8Q99708 897 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 RTKNQ9BST9 563 aa10.47□□□□□ -0.73
TCOF1-204ENST00000427724 CWH43Q9H720 699 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms