RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 GALNT11Q8NCW6 608 aa12.37□□□□□ -0.43
HDLBP-214ENST00000427183 SCN11AQ9UI33 1791 aa12.37□□□□□ -0.43
HDLBP-214ENST00000427183 E2F3O00716 465 aa12.37□□□□□ -0.43
HDLBP-214ENST00000427183 ALOX15BO15296 676 aa12.37□□□□□ -0.43
HDLBP-214ENST00000427183 PAGE1O75459 146 aa12.37□□□□□ -0.43
HDLBP-214ENST00000427183 GJB1P08034 283 aa12.37□□□□□ -0.43
HDLBP-214ENST00000427183 EPHX2P34913 555 aa12.37□□□□□ -0.43
HDLBP-214ENST00000427183 GRK6P43250 576 aa12.37□□□□□ -0.43
HDLBP-214ENST00000427183 SLC9B1Q4ZJI4 515 aa12.37□□□□□ -0.43
HDLBP-214ENST00000427183 ZNF557Q8N988 423 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-214ENST00000427183 ANKRD52Q8NB46 1076 aa12.37□□□□□ -0.43
HDLBP-214ENST00000427183 AKAP1Q92667 903 aaKnown RBP eCLIP12.37□□□□□ -0.43
HDLBP-214ENST00000427183 P2RX7Q99572 595 aaKnown RBP12.37□□□□□ -0.43
HDLBP-214ENST00000427183 DENND2DQ9H6A0 471 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-214ENST00000427183 CHRAC1Q9NRG0 131 aa12.37□□□□□ -0.43
HDLBP-214ENST00000427183 IL17RBQ9NRM6 502 aa12.37□□□□□ -0.43
HDLBP-214ENST00000427183 ADAMTSL3P82987 1691 aa12.37□□□□□ -0.43
HDLBP-214ENST00000427183 ZNF20P17024 532 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 CCNFP41002 786 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 AVPR1BP47901 424 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 MTPNP58546 118 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 GNA12Q03113 381 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 ZNF460Q14592 562 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 FAM46CQ5VWP2 391 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 TMED4Q7Z7H5 227 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 RIOX2Q8IUF8 465 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 PGAM4Q8N0Y7 254 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 HDDC3Q8N4P3 179 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 JOSD2Q8TAC2 188 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 GATAD2BQ8WXI9 593 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 ESAMQ96AP7 390 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 SLC25A36Q96CQ1 311 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 CENPNQ96H22 339 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-214ENST00000427183 ZNF558Q96NG5 402 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 WRAP53Q9BUR4 548 aaKnown RBP12.36□□□□□ -0.43
HDLBP-214ENST00000427183 B3GNT5Q9BYG0 378 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 PRDM16Q9HAZ2 1276 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 SMURF1Q9HCE7 757 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 SLC35F4A4IF30 521 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 TLR5O60602 858 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 ZNF16P17020 682 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-214ENST00000427183 ACVR2AP27037 513 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 MAP3K8P41279 467 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 DRG2P55039 364 aaKnown RBP12.36□□□□□ -0.43
HDLBP-214ENST00000427183 OR12D2P58182 307 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 RPP38P78345 283 aaKnown RBP12.36□□□□□ -0.43
HDLBP-214ENST00000427183 GTF2H2Q13888 395 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 ARL13AQ5H913 290 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-214ENST00000427183 GTF2H2CQ6P1K8 395 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 CXCL17Q6UXB2 119 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 LINGO4Q6UY18 593 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 TRIM74Q86UV6 250 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 TRIM73Q86UV7 250 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 MAFIPQ8WZ33 124 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 PURBQ96QR8 312 aaKnown RBP12.36□□□□□ -0.43
HDLBP-214ENST00000427183 BEX2Q9BXY8 128 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 BEX1Q9HBH7 125 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 EVLQ9UI08 416 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-214ENST00000427183 H3BNX3 289 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 SAP18O00422 153 aaKnown RBP12.36□□□□□ -0.43
HDLBP-214ENST00000427183 RPP40O75818 363 aaKnown RBP12.36□□□□□ -0.43
HDLBP-214ENST00000427183 ATRNO75882 1429 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 RPP14O95059 124 aaKnown RBP12.36□□□□□ -0.43
HDLBP-214ENST00000427183 VIPP01282 170 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 IFNA7P01567 189 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 PTPRAP18433 802 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 FNTBP49356 437 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 BBS12Q6ZW61 710 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 POGLUT1Q8NBL1 392 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 C8orf48Q96LL4 319 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 PORCNQ9H237 461 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 PAK6Q9NQU5 681 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-214ENST00000427183 SQORQ9Y6N5 450 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 SMIM30A4D0T7 59 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 ELOA3DA6NLF2 546 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-214ENST00000427183 STBD1O95210 358 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 HSD3B1P14060 373 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 PKMP14618 531 aaKnown RBP12.36□□□□□ -0.43
HDLBP-214ENST00000427183 VAMP1P23763 118 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 PSMD8P48556 350 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 S100A12P80511 92 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 RASGEF1BQ0VAM2 473 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 PCBP2Q15366 365 aaKnown RBP eCLIP12.36□□□□□ -0.431e-6■■■□□ 16.2
HDLBP-214ENST00000427183 TIGD6Q17RP2 521 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 CNPY1Q3B7I2 92 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 ELOA3BQ3SY89 546 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 KHDC1Q4VXA5 237 aaKnown RBP12.36□□□□□ -0.43
HDLBP-214ENST00000427183 ALG10Q5BKT4 473 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 LRRC38Q5VT99 294 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 RFWD3Q6PCD5 774 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 RANBP3LQ86VV4 465 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-214ENST00000427183 MREGQ8N565 214 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 ELOA3Q8NG57 546 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 OR5B17Q8NGF7 314 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 SLC7A6OSQ96CW6 309 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-214ENST00000427183 NXPE2Q96DL1 559 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 HSFY1Q96LI6 401 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 KCTD5Q9NXV2 234 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 WASF2Q9Y6W5 498 aa12.36□□□□□ -0.43
HDLBP-214ENST00000427183 HYKKA2RU49 373 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms