RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 BEST3Q8N1M1 668 aa6.23□□□□□ -1.41
HMGB1P32-201ENST00000425971 TDRD5Q8NAT2 981 aaKnown RBP6.23□□□□□ -1.41
HMGB1P32-201ENST00000425971 OR1J2Q8NGS2 313 aa6.23□□□□□ -1.41
HMGB1P32-201ENST00000425971 GRAMD2BQ96HH9 432 aa6.23□□□□□ -1.41
HMGB1P32-201ENST00000425971 DACH2Q96NX9 599 aa6.23□□□□□ -1.41
HMGB1P32-201ENST00000425971 NUDCD1Q96RS6 583 aa6.23□□□□□ -1.41
HMGB1P32-201ENST00000425971 RABEP2Q9H5N1 569 aa6.23□□□□□ -1.41
HMGB1P32-201ENST00000425971 DENND2DQ9H6A0 471 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P32-201ENST00000425971 SEBOXQ9HB31 216 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P32-201ENST00000425971 CNGB3Q9NQW8 809 aa6.23□□□□□ -1.41
HMGB1P32-201ENST00000425971 C5AR2Q9P296 337 aa6.23□□□□□ -1.41
HMGB1P32-201ENST00000425971 TINAGQ9UJW2 476 aa6.23□□□□□ -1.41
HMGB1P32-201ENST00000425971 TTC7AQ9ULT0 858 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P32-201ENST00000425971 PPIEQ9UNP9 301 aaKnown RBP6.23□□□□□ -1.41
HMGB1P32-201ENST00000425971 WBP11Q9Y2W2 641 aaKnown RBP6.23□□□□□ -1.41
HMGB1P32-201ENST00000425971 SQORQ9Y6N5 450 aa6.23□□□□□ -1.41
HMGB1P32-201ENST00000425971 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.23□□□□□ -1.41
HMGB1P32-201ENST00000425971 GAKO14976 1311 aa6.23□□□□□ -1.41
HMGB1P32-201ENST00000425971 GPR75-ASB3A0A0A6YYF3 556 aa6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 RPS10-NUDT3A0A1W2PQS6 291 aa6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 A8MXE2 369 aa6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 CXCL11O14625 94 aa6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 TBX10O75333 385 aa6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 TPOP07202 933 aa6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 ABCB1P08183 1280 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 TMEM191BP0C7N4 346 aa6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 RPL3P39023 403 aaKnown RBP6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 RFX2P48378 723 aa6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 NUDT6P53370 316 aa6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 C21orf58P58505 322 aa6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 CSNK2A1P68400 391 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 GPS2Q13227 327 aa6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 ETFDHQ16134 617 aa6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 C9orf152Q5JTZ5 239 aa6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 COLEC12Q5KU26 742 aa6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 FRG2Q64ET8 278 aa6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 ZC3HC1Q86WB0 502 aaKnown RBP6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 DSELQ8IZU8 1212 aa6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 GUF1Q8N442 669 aaKnown RBP6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 NRACQ8N912 160 aa6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 CSNK2A3Q8NEV1 391 aa6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 FOXP1Q9H334 677 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 SLITRK6Q9H5Y7 841 aa6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 C17orf75Q9HAS0 396 aa6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 CD209Q9NNX6 404 aa6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 SH3GLB2Q9NR46 395 aa6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 ZHX1Q9UKY1 873 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 PAM16Q9Y3D7 125 aa6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 FRYQ5TBA9 3013 aa6.22□□□□□ -1.41
HMGB1P32-201ENST00000425971 COL4A4P53420 1690 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 PHIPQ8WWQ0 1821 aa6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 CPED1A4D0V7 1026 aa6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 TMEM8BA6NDV4 472 aa6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 SOCS2O14508 198 aa6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 ASAP2O43150 1006 aa6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 NDUFS7O75251 213 aa6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 EGFP01133 1207 aa6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 CAPZA2P47755 286 aa6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 FASLGP48023 281 aa6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 MXI1P50539 228 aa6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 RAD23AP54725 363 aa6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 VCPP55072 806 aaKnown RBP6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 PSMD6Q15008 389 aa6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 FSCBQ5H9T9 825 aa6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 DAB2IPQ5VWQ8 1189 aa6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 NSUN5P2Q63ZY6 315 aa6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 LCN10Q6JVE6 187 aa6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 KCTD18Q6PI47 426 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 COLCA1Q6ZS62 124 aa6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 NRROSQ86YC3 692 aa6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 HM13Q8TCT9 377 aa6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 APBB2Q92870 758 aa6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 RHBDF1Q96CC6 855 aa6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 FSD1Q9BTV5 496 aa6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 MMTAG2Q9BU76 263 aaKnown RBP6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 SIL1Q9H173 461 aa6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 UBE2ZQ9H832 354 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 STK39Q9UEW8 545 aa6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 MUTYHQ9UIF7 546 aa6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 ZNF148Q9UQR1 794 aa6.21□□□□□ -1.42
HMGB1P32-201ENST00000425971 HELZ2Q9BYK8 2649 aaKnown RBP6.2□□□□□ -1.42
HMGB1P32-201ENST00000425971 CACNA1IQ9P0X4 2223 aa6.2□□□□□ -1.42
HMGB1P32-201ENST00000425971 A6NL46 340 aa6.2□□□□□ -1.42
HMGB1P32-201ENST00000425971 KBTBD13C9JR72 458 aa6.2□□□□□ -1.42
HMGB1P32-201ENST00000425971 INAFM1C9JVW0 142 aa6.2□□□□□ -1.42
HMGB1P32-201ENST00000425971 PSMD10O75832 226 aa6.2□□□□□ -1.42
HMGB1P32-201ENST00000425971 KCNA5P22460 613 aa6.2□□□□□ -1.42
HMGB1P32-201ENST00000425971 EEF1DP29692 281 aaKnown RBP6.2□□□□□ -1.42
HMGB1P32-201ENST00000425971 HNRNPH2P55795 449 aaKnown RBP6.2□□□□□ -1.42
HMGB1P32-201ENST00000425971 ROR1Q01973 937 aa6.2□□□□□ -1.42
HMGB1P32-201ENST00000425971 ROR2Q01974 943 aaKnown RBP6.2□□□□□ -1.42
HMGB1P32-201ENST00000425971 SNTB1Q13884 538 aaKnown RBP6.2□□□□□ -1.42
HMGB1P32-201ENST00000425971 TAF7Q15545 349 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P32-201ENST00000425971 LEXMQ3ZCV2 418 aa6.2□□□□□ -1.42
HMGB1P32-201ENST00000425971 CCDC152Q4G0S7 254 aa6.2□□□□□ -1.42
HMGB1P32-201ENST00000425971 IGSF11Q5DX21 431 aa6.2□□□□□ -1.42
HMGB1P32-201ENST00000425971 TCP11X2Q5H9J9 407 aa6.2□□□□□ -1.42
HMGB1P32-201ENST00000425971 FNBP1LQ5T0N5 605 aa6.2□□□□□ -1.42
HMGB1P32-201ENST00000425971 DCST1Q5T197 706 aa6.2□□□□□ -1.42
HMGB1P32-201ENST00000425971 FAM69BQ5VUD6 431 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms