RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 TMEM74Q96NL1 305 aa18■□□□□ 0.47
HDAC6-205ENST00000423941 NUDT22Q9BRQ3 303 aa18■□□□□ 0.47
HDAC6-205ENST00000423941 AARSD1Q9BTE6 412 aaKnown RBP18■□□□□ 0.47
HDAC6-205ENST00000423941 NRSN2Q9GZP1 204 aa18■□□□□ 0.47
HDAC6-205ENST00000423941 RDH14Q9HBH5 336 aa18■□□□□ 0.47
HDAC6-205ENST00000423941 EPHA6Q9UF33 1036 aa18■□□□□ 0.47
HDAC6-205ENST00000423941 A0A1W2PNU3 283 aaPredicted RBP17.99■□□□□ 0.47
HDAC6-205ENST00000423941 TMX2-CTNND1H3BSU7 103 aa17.99■□□□□ 0.47
HDAC6-205ENST00000423941 UBXN7O94888 489 aa17.99■□□□□ 0.47
HDAC6-205ENST00000423941 C9P02748 559 aa17.99■□□□□ 0.47
HDAC6-205ENST00000423941 ATP5DP30049 168 aa17.99■□□□□ 0.47
HDAC6-205ENST00000423941 HSPA14Q0VDF9 509 aa17.99■□□□□ 0.47
HDAC6-205ENST00000423941 BRD3Q15059 726 aa17.99■□□□□ 0.47
HDAC6-205ENST00000423941 AMZ1Q400G9 498 aa17.99■□□□□ 0.47
HDAC6-205ENST00000423941 OTOAQ7RTW8 1153 aa17.99■□□□□ 0.47
HDAC6-205ENST00000423941 PALM2Q8IXS6 379 aa17.99■□□□□ 0.47
HDAC6-205ENST00000423941 PHC3Q8NDX5 983 aa17.99■□□□□ 0.47
HDAC6-205ENST00000423941 ACVR1CQ8NER5 493 aa17.99■□□□□ 0.47
HDAC6-205ENST00000423941 LIN37Q96GY3 246 aaPredicted RBP17.99■□□□□ 0.47
HDAC6-205ENST00000423941 TFB2MQ9H5Q4 396 aaKnown RBP17.99■□□□□ 0.47
HDAC6-205ENST00000423941 LRRC4CQ9HCJ2 640 aa17.99■□□□□ 0.47
HDAC6-205ENST00000423941 SMYD2Q9NRG4 433 aa17.99■□□□□ 0.47
HDAC6-205ENST00000423941 DHRS7Q9Y394 339 aa17.99■□□□□ 0.47
HDAC6-205ENST00000423941 MN1Q10571 1320 aaPredicted RBP17.98■□□□□ 0.47
HDAC6-205ENST00000423941 FRYQ5TBA9 3013 aa17.98■□□□□ 0.47
HDAC6-205ENST00000423941 IGHV5-10-1A0A0J9YXX1 117 aa17.98■□□□□ 0.47
HDAC6-205ENST00000423941 DUX1O43812 170 aa17.98■□□□□ 0.47
HDAC6-205ENST00000423941 TPBGLP0DKB5 382 aa17.98■□□□□ 0.47
HDAC6-205ENST00000423941 INHBCP55103 352 aa17.98■□□□□ 0.47
HDAC6-205ENST00000423941 TRA2AQ13595 282 aaKnown RBP eCLIP17.98■□□□□ 0.47
HDAC6-205ENST00000423941 C3orf62Q6ZUJ4 267 aa17.98■□□□□ 0.47
HDAC6-205ENST00000423941 SLC26A11Q86WA9 606 aa17.98■□□□□ 0.47
HDAC6-205ENST00000423941 RASGRP3Q8IV61 690 aa17.98■□□□□ 0.47
HDAC6-205ENST00000423941 TBC1D21Q8IYX1 336 aa17.98■□□□□ 0.47
HDAC6-205ENST00000423941 C9orf72Q96LT7 481 aa17.98■□□□□ 0.47
HDAC6-205ENST00000423941 SLC30A3Q99726 388 aa17.98■□□□□ 0.47
HDAC6-205ENST00000423941 TSPYL1Q9H0U9 437 aa17.98■□□□□ 0.47
HDAC6-205ENST00000423941 SEMA6CQ9H3T2 930 aa17.98■□□□□ 0.47
HDAC6-205ENST00000423941 SEMA5BQ9P283 1151 aa17.98■□□□□ 0.47
HDAC6-205ENST00000423941 SLC17A6Q9P2U8 582 aa17.98■□□□□ 0.47
HDAC6-205ENST00000423941 CORO1CQ9ULV4 474 aaPredicted RBP17.98■□□□□ 0.47
HDAC6-205ENST00000423941 PSAT1Q9Y617 370 aa17.98■□□□□ 0.47
HDAC6-205ENST00000423941 TCRBV9S1A1TA0A576 114 aa17.97■□□□□ 0.47
HDAC6-205ENST00000423941 TRABD2BA6NFA1 517 aa17.97■□□□□ 0.47
HDAC6-205ENST00000423941 FAM159BA6NKW6 160 aa17.97■□□□□ 0.47
HDAC6-205ENST00000423941 MATN4O95460 622 aa17.97■□□□□ 0.47
HDAC6-205ENST00000423941 PROS1P07225 676 aa17.97■□□□□ 0.47
HDAC6-205ENST00000423941 CHRM3P20309 590 aa17.97■□□□□ 0.47
HDAC6-205ENST00000423941 CUL1Q13616 776 aa17.97■□□□□ 0.47
HDAC6-205ENST00000423941 TMED2Q15363 201 aa17.97■□□□□ 0.47
HDAC6-205ENST00000423941 SYTL3Q4VX76 610 aa17.97■□□□□ 0.47
HDAC6-205ENST00000423941 IGF2-ASQ6U949 168 aa17.97■□□□□ 0.47
HDAC6-205ENST00000423941 ARHGAP22Q7Z5H3 698 aa17.97■□□□□ 0.47
HDAC6-205ENST00000423941 OR5K2Q8NHB8 316 aa17.97■□□□□ 0.47
HDAC6-205ENST00000423941 GIMAP7Q8NHV1 300 aa17.97■□□□□ 0.47
HDAC6-205ENST00000423941 ATXN7L3BQ96GX2 97 aa17.97■□□□□ 0.47
HDAC6-205ENST00000423941 PRR11Q96HE9 360 aaPredicted RBP17.97■□□□□ 0.47
HDAC6-205ENST00000423941 AHCYL2Q96HN2 611 aaKnown RBP17.97■□□□□ 0.47
HDAC6-205ENST00000423941 FERD3LQ96RJ6 166 aa17.97■□□□□ 0.47
HDAC6-205ENST00000423941 PPANQ9NQ55 473 aaKnown RBP17.97■□□□□ 0.47
HDAC6-205ENST00000423941 TMEM9Q9P0T7 183 aa17.97■□□□□ 0.47
HDAC6-205ENST00000423941 ZFATQ9P243 1243 aa17.97■□□□□ 0.47
HDAC6-205ENST00000423941 DKK4Q9UBT3 224 aa17.97■□□□□ 0.47
HDAC6-205ENST00000423941 SPAG6O75602 509 aa17.96■□□□□ 0.47
HDAC6-205ENST00000423941 THRAP10827 490 aa17.96■□□□□ 0.47
HDAC6-205ENST00000423941 SKIV2L2P42285 1042 aaKnown RBP17.96■□□□□ 0.47
HDAC6-205ENST00000423941 CAPZBP47756 277 aa17.96■□□□□ 0.47
HDAC6-205ENST00000423941 CSE1LP55060 971 aaKnown RBP17.96■□□□□ 0.47
HDAC6-205ENST00000423941 ILF2Q12905 390 aaKnown RBP17.96■□□□□ 0.47
HDAC6-205ENST00000423941 MAP9Q49MG5 647 aa17.96■□□□□ 0.47
HDAC6-205ENST00000423941 UNC5DQ6UXZ4 953 aa17.96■□□□□ 0.47
HDAC6-205ENST00000423941 CEP128Q6ZU80 1094 aa17.96■□□□□ 0.47
HDAC6-205ENST00000423941 NEK10Q6ZWH5 1172 aa17.96■□□□□ 0.47
HDAC6-205ENST00000423941 ZC3HC1Q86WB0 502 aaKnown RBP17.96■□□□□ 0.47
HDAC6-205ENST00000423941 CCDC25Q86WR0 208 aa17.96■□□□□ 0.47
HDAC6-205ENST00000423941 PLXDC1Q8IUK5 500 aa17.96■□□□□ 0.47
HDAC6-205ENST00000423941 ZBTB2Q8N680 514 aa17.96■□□□□ 0.47
HDAC6-205ENST00000423941 OR5AR1Q8NGP9 310 aa17.96■□□□□ 0.47
HDAC6-205ENST00000423941 CD200R1Q8TD46 325 aa17.96■□□□□ 0.47
HDAC6-205ENST00000423941 NCSTNQ92542 709 aa17.96■□□□□ 0.47
HDAC6-205ENST00000423941 RSC1A1Q92681 617 aa17.96■□□□□ 0.47
HDAC6-205ENST00000423941 MENTQ9BUN1 341 aa17.96■□□□□ 0.47
HDAC6-205ENST00000423941 FUT8Q9BYC5 575 aa17.96■□□□□ 0.47
HDAC6-205ENST00000423941 CCDC68Q9H2F9 335 aa17.96■□□□□ 0.47
HDAC6-205ENST00000423941 NSMCE4AQ9NXX6 385 aa17.96■□□□□ 0.47
HDAC6-205ENST00000423941 MTRF1LQ9UGC7 380 aaKnown RBP17.96■□□□□ 0.47
HDAC6-205ENST00000423941 POLG2Q9UHN1 485 aa17.96■□□□□ 0.47
HDAC6-205ENST00000423941 ASF1AQ9Y294 204 aa17.96■□□□□ 0.47
HDAC6-205ENST00000423941 PCDHGA8Q9Y5G5 932 aa17.96■□□□□ 0.47
HDAC6-205ENST00000423941 CCDC187A0A096LP49 1063 aa17.95■□□□□ 0.46
HDAC6-205ENST00000423941 CXorf49A8MYA2 514 aaPredicted RBP17.95■□□□□ 0.46
HDAC6-205ENST00000423941 E5RI56 91 aa17.95■□□□□ 0.46
HDAC6-205ENST00000423941 EIF3FO00303 357 aaPredicted RBP17.95■□□□□ 0.46
HDAC6-205ENST00000423941 DXOO77932 396 aaKnown RBP17.95■□□□□ 0.46
HDAC6-205ENST00000423941 TYRP1P17643 537 aa17.95■□□□□ 0.46
HDAC6-205ENST00000423941 AMD1P17707 334 aa17.95■□□□□ 0.46
HDAC6-205ENST00000423941 LSSP48449 732 aa17.95■□□□□ 0.46
HDAC6-205ENST00000423941 EIF3IQ13347 325 aaKnown RBP17.95■□□□□ 0.46
HDAC6-205ENST00000423941 GRB7Q14451 532 aa17.95■□□□□ 0.46
HDAC6-205ENST00000423941 ACSBG2Q5FVE4 666 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms