RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 CDADC1Q9BWV3 514 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 LDAHQ9H6V9 325 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 UGT1A7Q9HAW7 530 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 UGT1A10Q9HAW8 530 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 UGT1A8Q9HAW9 530 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 FANCFQ9NPI8 374 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 COQ6Q9Y2Z9 468 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 N6AMT1Q9Y5N5 214 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 GRXCR1A8MXD5 290 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 LIN7AO14910 233 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-206ENST00000421141 GMFGO60234 142 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 PAK4O96013 591 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-206ENST00000421141 HOXB6P17509 224 aaKnown RBP10.56□□□□□ -0.72
PTCH1-206ENST00000421141 CDH13P55290 713 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 LGALS3BPQ08380 585 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 MARCH8Q5T0T0 291 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 ZNF276Q8N554 614 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 ART5Q96L15 291 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 HCFC1R1Q9NWW0 138 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 SIT1Q9Y3P8 196 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 SBF1O95248 1867 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 C2orf71A6NGG8 1288 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 C2orf74A8MZ97 194 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 HNF1BP35680 557 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 STK19P49842 368 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-206ENST00000421141 MAPK10P53779 464 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 POLE2P56282 527 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.56□□□□□ -0.72
PTCH1-206ENST00000421141 EPHX4Q8IUS5 362 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 APOLD1Q96LR9 279 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 SAR1AQ9NR31 198 aa10.56□□□□□ -0.72
PTCH1-206ENST00000421141 TYW3Q6IPR3 259 aaKnown RBP10.55□□□□□ -0.72
PTCH1-206ENST00000421141 FGD2Q7Z6J4 655 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 ULK2Q8IYT8 1036 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 LIX1Q8N485 282 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 IL22RA1Q8N6P7 574 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 FIBINQ8TAL6 211 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 RASSF5Q8WWW0 418 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 TFGQ92734 400 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-206ENST00000421141 CFAP20Q9Y6A4 193 aaKnown RBP10.55□□□□□ -0.72
PTCH1-206ENST00000421141 DCLK1O15075 740 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 WFS1O76024 890 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 BEST1O76090 585 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 VHLP40337 213 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 PEX19P40855 299 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 SEPHS1P49903 392 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 CSTF1Q05048 431 aaKnown RBP10.55□□□□□ -0.72
PTCH1-206ENST00000421141 CLCQ05315 142 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 NEK5Q6P3R8 708 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 RALGPS2Q86X27 583 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-206ENST00000421141 ZNF786Q8N393 782 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 SETD9Q8NE22 299 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 BTBD10Q9BSF8 475 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 MYO16Q9Y6X6 1858 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 TMEM115Q12893 351 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-206ENST00000421141 INO80DQ53TQ3 878 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-206ENST00000421141 MLIPQ5VWP3 458 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 TWIST2Q8WVJ9 160 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 NXPE3Q969Y0 559 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 CENPTQ96BT3 561 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 C17orf62Q9BQA9 187 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 C9orf16Q9BUW7 83 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 CFL2Q9Y281 166 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 MEIS3P2A8K0S8 358 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 K7EPI3 171 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 AP2A2O94973 939 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 IL5RAQ01344 420 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 OTUD3Q5T2D3 398 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-206ENST00000421141 FAM171BQ6P995 826 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 COX18Q8N8Q8 333 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 OR13C4Q8NGS5 318 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 MSANTD3Q96H12 275 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 CDRT15Q96T59 188 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 ARMCX1Q9P291 453 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 APOBEC3BQ9UH17 382 aaKnown RBP10.55□□□□□ -0.72
PTCH1-206ENST00000421141 HCFC2Q9Y5Z7 792 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 IGLON5A6NGN9 336 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 NBNO60934 754 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 UGT2B17O75795 530 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 ITGB1P05556 798 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 HSMCR30P0CW71 290 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 TYRP1P17643 537 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 SHMT2P34897 504 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 POU5F2Q8N7G0 328 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 ZHX1-C8orf76Q96EF9 292 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 MAGEE1Q9HCI5 957 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 WBP1LQ9NX94 342 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 ATXN2Q99700 1313 aaKnown RBP10.55□□□□□ -0.72
PTCH1-206ENST00000421141 ZNF487B1APH4 448 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 SIN3BO75182 1162 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 JUPP14923 745 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 NUDT1P36639 197 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 RALGDSQ12967 914 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 SLC9A4Q6AI14 798 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 KLHDC10Q6PID8 442 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 CKAP2Q8WWK9 683 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 LRRC46Q96FV0 321 aa10.55□□□□□ -0.72
PTCH1-206ENST00000421141 TRMT2BQ96GJ1 504 aaKnown RBP10.55□□□□□ -0.72
PTCH1-206ENST00000421141 TEFMQ96QE5 360 aaKnown RBP10.55□□□□□ -0.72
PTCH1-206ENST00000421141 ATP6AP2A0A1C7CYW4 349 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms