RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 ATXN7L3BQ96GX2 97 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 FERD3LQ96RJ6 166 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 RHOXF2Q9BQY4 288 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 CCDC68Q9H2F9 335 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 KIR3DX1Q9H7L2 352 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 OGFRQ9NZT2 677 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 ZFATQ9P243 1243 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 GALPQ9UBC7 116 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 SLC24A2Q9UI40 661 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 ENTPD2Q9Y5L3 495 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 HEBP2Q9Y5Z4 205 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 PSAT1Q9Y617 370 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 AGRPO00253 132 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 PIAS1O75925 651 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 UBXN7O94888 489 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 PROS1P07225 676 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 TYRP1P17643 537 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 CHRM3P20309 590 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 MPSTP25325 297 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 ACADLP28330 430 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 NDUFS1P28331 727 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 DEKP35659 375 aaKnown RBP12.16□□□□□ -0.46
SKA1-203ENST00000417656 CAPZBP47756 277 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 INHBCP55103 352 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 GFERP55789 205 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 GPX6P59796 221 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 FOXK2Q01167 660 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 PLOD1Q02809 727 aaPredicted RBP12.16□□□□□ -0.46
SKA1-203ENST00000417656 CAMK2BQ13554 666 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 TEX35Q5T0J7 233 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 RBM20Q5T481 1227 aaKnown RBP12.16□□□□□ -0.46
SKA1-203ENST00000417656 PHF19Q5T6S3 580 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 PIM3Q86V86 326 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 CACTIN-AS1Q8N1I8 211 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 SIDT2Q8NBJ9 832 aaKnown RBP12.16□□□□□ -0.46
SKA1-203ENST00000417656 PHC3Q8NDX5 983 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 OR5AR1Q8NGP9 310 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 TFGQ92734 400 aaPredicted RBP12.16□□□□□ -0.46
SKA1-203ENST00000417656 CCDC74BQ96LY2 380 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 FMO2Q99518 471 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 SLC30A3Q99726 388 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 AARSD1Q9BTE6 412 aaKnown RBP12.16□□□□□ -0.46
SKA1-203ENST00000417656 FAM129AQ9BZQ8 928 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 SEMA6CQ9H3T2 930 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 EPB41L1Q9H4G0 881 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 SMYD2Q9NRG4 433 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 MOCS1Q9NZB8 636 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 MTRF1LQ9UGC7 380 aaKnown RBP12.16□□□□□ -0.46
SKA1-203ENST00000417656 RUVBL2Q9Y230 463 aaKnown RBP12.16□□□□□ -0.46
SKA1-203ENST00000417656 ASF1AQ9Y294 204 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 MED16Q9Y2X0 877 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 UNC13CQ8NB66 2214 aa12.16□□□□□ -0.46
SKA1-203ENST00000417656 ADAMTS20P59510 1910 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 MN1Q10571 1320 aaPredicted RBP12.15□□□□□ -0.46
SKA1-203ENST00000417656 IGHV5-10-1A0A0J9YXX1 117 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 TCRBV9S1A1TA0A576 114 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 PMS2P1A4D2B8 440 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 KPNA5O15131 536 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 SLCO2B1O94956 709 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 AHSGP02765 367 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 THRAP10827 490 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 AMD1P17707 334 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 CCKBRP32239 447 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 CLCN7P51798 805 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 PPP1CAP62136 330 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 PRKG2Q13237 762 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 CUL1Q13616 776 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 GBX1Q14549 363 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 CLPPQ16740 277 aaPredicted RBP12.15□□□□□ -0.46
SKA1-203ENST00000417656 KIF26BQ2KJY2 2108 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 C3orf38Q5JPI3 329 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 SNAP47Q5SQN1 464 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 PLEKHS1Q5SXH7 462 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 UBAP2Q5T6F2 1119 aaKnown RBP12.15□□□□□ -0.46
SKA1-203ENST00000417656 ZNF574Q6ZN55 896 aaPredicted RBP12.15□□□□□ -0.46
SKA1-203ENST00000417656 GALNT7Q86SF2 657 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 GPATCH11Q8N954 259 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 ACVR1CQ8NER5 493 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 OR4D9Q8NGE8 314 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 OR52E1Q8NGJ3 308 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 CFAP61Q8NHU2 1237 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 CD200R1Q8TD46 325 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 SKA2Q8WVK7 121 aaPredicted RBP12.15□□□□□ -0.46
SKA1-203ENST00000417656 NCSTNQ92542 709 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 KCNJ9Q92806 393 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 GATA6Q92908 595 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 TMEM74Q96NL1 305 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 GPR21Q99679 349 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 NRTNQ99748 197 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 TRIT1Q9H3H1 467 aaKnown RBP12.15□□□□□ -0.46
SKA1-203ENST00000417656 MVB12BQ9H7P6 319 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 KLHL3Q9UH77 587 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 NFS1Q9Y697 457 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 COMMD10Q9Y6G5 202 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 COLEC10Q9Y6Z7 277 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 AKAP13Q12802 2813 aa12.15□□□□□ -0.46
SKA1-203ENST00000417656 A0A1W2PNU3 283 aaPredicted RBP12.14□□□□□ -0.47
SKA1-203ENST00000417656 CXorf49A8MYA2 514 aaPredicted RBP12.14□□□□□ -0.47
SKA1-203ENST00000417656 VPS26AO75436 327 aa12.14□□□□□ -0.47
SKA1-203ENST00000417656 GSTA2P09210 222 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms