RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 ATG4AQ8WYN0 398 aa17.1■□□□□ 0.33
PDLIM2-208ENST00000416159 SEC14L1Q92503 715 aa17.1■□□□□ 0.33
PDLIM2-208ENST00000416159 TFGQ92734 400 aaPredicted RBP17.1■□□□□ 0.33
PDLIM2-208ENST00000416159 ZNF501Q96CX3 271 aaPredicted RBP17.1■□□□□ 0.33
PDLIM2-208ENST00000416159 ABHD17AQ96GS6 310 aa17.1■□□□□ 0.33
PDLIM2-208ENST00000416159 GPR87Q9BY21 358 aa17.1■□□□□ 0.33
PDLIM2-208ENST00000416159 TFB2MQ9H5Q4 396 aaKnown RBP17.1■□□□□ 0.33
PDLIM2-208ENST00000416159 ETNK1Q9HBU6 452 aa17.1■□□□□ 0.33
PDLIM2-208ENST00000416159 SYTL2Q9HCH5 934 aa17.1■□□□□ 0.33
PDLIM2-208ENST00000416159 LATS2Q9NRM7 1088 aa17.1■□□□□ 0.33
PDLIM2-208ENST00000416159 SMARCAL1Q9NZC9 954 aa17.1■□□□□ 0.33
PDLIM2-208ENST00000416159 KCNMB2Q9Y691 235 aa17.1■□□□□ 0.33
PDLIM2-208ENST00000416159 PIPSLA2A3N6 862 aa17.09■□□□□ 0.33
PDLIM2-208ENST00000416159 LIN7AO14910 233 aaPredicted RBP17.09■□□□□ 0.33
PDLIM2-208ENST00000416159 LIASO43766 372 aa17.09■□□□□ 0.33
PDLIM2-208ENST00000416159 KRT86O43790 486 aa17.09■□□□□ 0.33
PDLIM2-208ENST00000416159 CPNE3O75131 537 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-208ENST00000416159 SCRG1O75711 98 aa17.09■□□□□ 0.33
PDLIM2-208ENST00000416159 MSNP26038 577 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-208ENST00000416159 LMAN1P49257 510 aa17.09■□□□□ 0.33
PDLIM2-208ENST00000416159 OASLQ15646 514 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-208ENST00000416159 GPR19Q15760 415 aa17.09■□□□□ 0.33
PDLIM2-208ENST00000416159 FBXO38Q6PIJ6 1188 aa17.09■□□□□ 0.33
PDLIM2-208ENST00000416159 SLC13A5Q86YT5 568 aaPredicted RBP17.09■□□□□ 0.33
PDLIM2-208ENST00000416159 TMEM126BQ8IUX1 230 aa17.09■□□□□ 0.33
PDLIM2-208ENST00000416159 PHC3Q8NDX5 983 aa17.09■□□□□ 0.33
PDLIM2-208ENST00000416159 OR52E1Q8NGJ3 308 aa17.09■□□□□ 0.33
PDLIM2-208ENST00000416159 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.09■□□□□ 0.33
PDLIM2-208ENST00000416159 TRIM4Q9C037 500 aa17.09■□□□□ 0.33
PDLIM2-208ENST00000416159 TWSG1Q9GZX9 223 aa17.09■□□□□ 0.33
PDLIM2-208ENST00000416159 FANCEQ9HB96 536 aa17.09■□□□□ 0.33
PDLIM2-208ENST00000416159 ANAPC2Q9UJX6 822 aa17.09■□□□□ 0.33
PDLIM2-208ENST00000416159 GUCA1BQ9UMX6 200 aa17.09■□□□□ 0.33
PDLIM2-208ENST00000416159 ZNF148Q9UQR1 794 aa17.09■□□□□ 0.33
PDLIM2-208ENST00000416159 SPTBP11277 2137 aa17.09■□□□□ 0.33
PDLIM2-208ENST00000416159 CCDC78A2IDD5 438 aa17.08■□□□□ 0.32
PDLIM2-208ENST00000416159 HEATR9A2RTY3 570 aa17.08■□□□□ 0.32
PDLIM2-208ENST00000416159 GSAPA4D1B5 854 aa17.08■□□□□ 0.32
PDLIM2-208ENST00000416159 CDC14CA4D256 554 aa17.08■□□□□ 0.32
PDLIM2-208ENST00000416159 SLC9B1P1A6NJY1 282 aa17.08■□□□□ 0.32
PDLIM2-208ENST00000416159 BTN3A3O00478 584 aa17.08■□□□□ 0.32
PDLIM2-208ENST00000416159 MAP3K7O43318 606 aa17.08■□□□□ 0.32
PDLIM2-208ENST00000416159 SUN1O94901 812 aa17.08■□□□□ 0.32
PDLIM2-208ENST00000416159 IFNB1P01574 187 aa17.08■□□□□ 0.32
PDLIM2-208ENST00000416159 FTH1P02794 183 aa17.08■□□□□ 0.32
PDLIM2-208ENST00000416159 PRDX3P30048 256 aaKnown RBP17.08■□□□□ 0.32
PDLIM2-208ENST00000416159 FOXN2P32314 431 aa17.08■□□□□ 0.32
PDLIM2-208ENST00000416159 PREPP48147 710 aa17.08■□□□□ 0.32
PDLIM2-208ENST00000416159 RPS15P62841 145 aaKnown RBP17.08■□□□□ 0.32
PDLIM2-208ENST00000416159 BOP1Q14137 746 aaKnown RBP17.08■□□□□ 0.32
PDLIM2-208ENST00000416159 LYPLAL1Q5VWZ2 237 aa17.08■□□□□ 0.32
PDLIM2-208ENST00000416159 PACS1Q6VY07 963 aa17.08■□□□□ 0.32
PDLIM2-208ENST00000416159 PPP1R21Q6ZMI0 780 aa17.08■□□□□ 0.32
PDLIM2-208ENST00000416159 MICALCLQ6ZW33 695 aa17.08■□□□□ 0.32
PDLIM2-208ENST00000416159 AMIGO1Q86WK6 493 aa17.08■□□□□ 0.32
PDLIM2-208ENST00000416159 PPM1MQ96MI6 270 aa17.08■□□□□ 0.32
PDLIM2-208ENST00000416159 LRFN5Q96NI6 719 aa17.08■□□□□ 0.32
PDLIM2-208ENST00000416159 TTC1Q99614 292 aa17.08■□□□□ 0.32
PDLIM2-208ENST00000416159 ZNF71Q9NQZ8 489 aaPredicted RBP17.08■□□□□ 0.32
PDLIM2-208ENST00000416159 RIMKLBQ9ULI2 386 aa17.08■□□□□ 0.32
PDLIM2-208ENST00000416159 PRSS21Q9Y6M0 314 aa17.08■□□□□ 0.32
PDLIM2-208ENST00000416159 SEC16AO15027 2179 aa17.08■□□□□ 0.32
PDLIM2-208ENST00000416159 CCDC162PA2VCL2 907 aa17.07■□□□□ 0.32
PDLIM2-208ENST00000416159 C2orf74A8MZ97 194 aa17.07■□□□□ 0.32
PDLIM2-208ENST00000416159 E7EVH7 732 aa17.07■□□□□ 0.32
PDLIM2-208ENST00000416159 F8W8V4 182 aa17.07■□□□□ 0.32
PDLIM2-208ENST00000416159 BTN3A1O00481 513 aa17.07■□□□□ 0.32
PDLIM2-208ENST00000416159 KLK3P07288 261 aaPredicted RBP17.07■□□□□ 0.32
PDLIM2-208ENST00000416159 FURINP09958 794 aa17.07■□□□□ 0.32
PDLIM2-208ENST00000416159 PTPN4P29074 926 aa17.07■□□□□ 0.32
PDLIM2-208ENST00000416159 GSDMDP57764 484 aa17.07■□□□□ 0.32
PDLIM2-208ENST00000416159 PLOD1Q02809 727 aaPredicted RBP17.07■□□□□ 0.32
PDLIM2-208ENST00000416159 CCDC38Q502W7 563 aa17.07■□□□□ 0.32
PDLIM2-208ENST00000416159 LACTB2Q53H82 288 aaPredicted RBP17.07■□□□□ 0.32
PDLIM2-208ENST00000416159 FAM199XQ6PEV8 388 aaPredicted RBP17.07■□□□□ 0.32
PDLIM2-208ENST00000416159 ELMO1Q92556 727 aa17.07■□□□□ 0.32
PDLIM2-208ENST00000416159 RANBP9Q96S59 729 aa17.07■□□□□ 0.32
PDLIM2-208ENST00000416159 ACTL8Q9H568 366 aa17.07■□□□□ 0.32
PDLIM2-208ENST00000416159 AKIRIN1Q9H9L7 192 aaPredicted RBP17.07■□□□□ 0.32
PDLIM2-208ENST00000416159 FARSAQ9Y285 508 aaKnown RBP17.07■□□□□ 0.32
PDLIM2-208ENST00000416159 OR51F1A6NGY5 319 aa17.06■□□□□ 0.32
PDLIM2-208ENST00000416159 MKRN2OSH3BPM6 223 aa17.06■□□□□ 0.32
PDLIM2-208ENST00000416159 OR56A5P0C7T3 313 aa17.06■□□□□ 0.32
PDLIM2-208ENST00000416159 MSL3P1P0C860 447 aa17.06■□□□□ 0.32
PDLIM2-208ENST00000416159 ADRA1DP25100 572 aa17.06■□□□□ 0.32
PDLIM2-208ENST00000416159 TLE1Q04724 770 aa17.06■□□□□ 0.32
PDLIM2-208ENST00000416159 PRKG2Q13237 762 aa17.06■□□□□ 0.32
PDLIM2-208ENST00000416159 SEMA5AQ13591 1074 aa17.06■□□□□ 0.32
PDLIM2-208ENST00000416159 RPS6KA1Q15418 735 aa17.06■□□□□ 0.32
PDLIM2-208ENST00000416159 TSTD2Q5T7W7 516 aa17.06■□□□□ 0.32
PDLIM2-208ENST00000416159 AFTPHQ6ULP2 937 aa17.06■□□□□ 0.32
PDLIM2-208ENST00000416159 NLRP9Q7RTR0 991 aa17.06■□□□□ 0.32
PDLIM2-208ENST00000416159 SYVN1Q86TM6 617 aa17.06■□□□□ 0.32
PDLIM2-208ENST00000416159 ADGRF3Q8IZF5 1079 aa17.06■□□□□ 0.32
PDLIM2-208ENST00000416159 OR13J1Q8NGT2 312 aa17.06■□□□□ 0.32
PDLIM2-208ENST00000416159 C1orf54Q8WWF1 131 aa17.06■□□□□ 0.32
PDLIM2-208ENST00000416159 CPT1BQ92523 772 aa17.06■□□□□ 0.32
PDLIM2-208ENST00000416159 MR1Q95460 341 aa17.06■□□□□ 0.32
PDLIM2-208ENST00000416159 HDAC10Q969S8 669 aa17.06■□□□□ 0.32
PDLIM2-208ENST00000416159 HGH1Q9BTY7 390 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms