RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 NVLO15381 856 aaKnown RBP14.33□□□□□ -0.12
CHD1-202ENST00000414220 C9P02748 559 aa14.33□□□□□ -0.12
CHD1-202ENST00000414220 ANKRD34CP0C6C1 535 aa14.33□□□□□ -0.12
CHD1-202ENST00000414220 HGFP14210 728 aa14.33□□□□□ -0.12
CHD1-202ENST00000414220 PKMP14618 531 aaKnown RBP14.33□□□□□ -0.12
CHD1-202ENST00000414220 ARNTP27540 789 aa14.33□□□□□ -0.12
CHD1-202ENST00000414220 PDHA2P29803 388 aa14.33□□□□□ -0.12
CHD1-202ENST00000414220 CCR7P32248 378 aa14.33□□□□□ -0.12
CHD1-202ENST00000414220 CSE1LP55060 971 aaKnown RBP14.33□□□□□ -0.12
CHD1-202ENST00000414220 CAV1Q03135 178 aa14.33□□□□□ -0.12
CHD1-202ENST00000414220 TTLL9Q3SXZ7 439 aa14.33□□□□□ -0.12
CHD1-202ENST00000414220 DNTTIP2Q5QJE6 756 aaKnown RBP14.33□□□□□ -0.12
CHD1-202ENST00000414220 PLEKHS1Q5SXH7 462 aa14.33□□□□□ -0.12
CHD1-202ENST00000414220 DCAF12Q5T6F0 453 aa14.33□□□□□ -0.12
CHD1-202ENST00000414220 CACHD1Q5VU97 1274 aa14.33□□□□□ -0.12
CHD1-202ENST00000414220 BROXQ5VW32 411 aa14.33□□□□□ -0.12
CHD1-202ENST00000414220 DUS1LQ6P1R4 473 aaKnown RBP14.33□□□□□ -0.12
CHD1-202ENST00000414220 CENPUQ71F23 418 aa14.33□□□□□ -0.12
CHD1-202ENST00000414220 ARHGAP22Q7Z5H3 698 aa14.33□□□□□ -0.12
CHD1-202ENST00000414220 SLC22A15Q8IZD6 547 aa14.33□□□□□ -0.12
CHD1-202ENST00000414220 OR4E2Q8NGC2 313 aa14.33□□□□□ -0.12
CHD1-202ENST00000414220 KIF18AQ8NI77 898 aa14.33□□□□□ -0.12
CHD1-202ENST00000414220 MAGEC3Q8TD91 643 aa14.33□□□□□ -0.12
CHD1-202ENST00000414220 SKA2Q8WVK7 121 aaPredicted RBP14.33□□□□□ -0.12
CHD1-202ENST00000414220 UBXN4Q92575 508 aa14.33□□□□□ -0.12
CHD1-202ENST00000414220 LPGAT1Q92604 370 aa14.33□□□□□ -0.12
CHD1-202ENST00000414220 RSC1A1Q92681 617 aa14.33□□□□□ -0.12
CHD1-202ENST00000414220 TEFMQ96QE5 360 aaKnown RBP14.33□□□□□ -0.12
CHD1-202ENST00000414220 ZPBPQ9BS86 351 aa14.33□□□□□ -0.12
CHD1-202ENST00000414220 TFB2MQ9H5Q4 396 aaKnown RBP14.33□□□□□ -0.12
CHD1-202ENST00000414220 PPANQ9NQ55 473 aaKnown RBP14.33□□□□□ -0.12
CHD1-202ENST00000414220 SLC39A1Q9NY26 324 aa14.33□□□□□ -0.12
CHD1-202ENST00000414220 TMEM9Q9P0T7 183 aa14.33□□□□□ -0.12
CHD1-202ENST00000414220 ZC3H7BQ9UGR2 993 aaKnown RBP14.33□□□□□ -0.12
CHD1-202ENST00000414220 CRYL1Q9Y2S2 319 aa14.33□□□□□ -0.12
CHD1-202ENST00000414220 PRAMEF33A0A0G2JMD5 474 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 OR6C74A6NCV1 312 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 OR5K3A6NET4 321 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 SRRM3A6NNA2 597 aaPredicted RBP14.32□□□□□ -0.12
CHD1-202ENST00000414220 IQCF5A8MTL0 148 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 CDRT15L2A8MXV6 281 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 B4E171 279 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 AGRPO00253 132 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 RAD51CO43502 376 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 AOAHP28039 575 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 SHMT2P34897 504 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 EIF2S3P41091 472 aaKnown RBP14.32□□□□□ -0.12
CHD1-202ENST00000414220 TSPAN7P41732 249 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 CRYMQ14894 314 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 ZNF658BQ4V348 819 aaPredicted RBP14.32□□□□□ -0.12
CHD1-202ENST00000414220 HSP90AA5PQ58FG0 334 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 UGT3A1Q6NUS8 523 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 UNC5DQ6UXZ4 953 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 CEACAM20Q6UY09 585 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 MICALCLQ6ZW33 695 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 PRSS42Q7Z5A4 293 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 CLEC14AQ86T13 490 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 AMIGO1Q86WK6 493 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 CARFQ8N187 725 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 KRT222Q8N1A0 295 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 PHC3Q8NDX5 983 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 OR52E1Q8NGJ3 308 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 OR5K2Q8NHB8 316 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 KCNE4Q8WWG9 221 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 USP7Q93009 1102 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 PRR11Q96HE9 360 aaPredicted RBP14.32□□□□□ -0.12
CHD1-202ENST00000414220 DPH1Q9BZG8 443 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 DPH5Q9H2P9 285 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 ASCL3Q9NQ33 180 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 IARS2Q9NSE4 1012 aaKnown RBP14.32□□□□□ -0.12
CHD1-202ENST00000414220 OGFRQ9NZT2 677 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 TDRKHQ9Y2W6 561 aaKnown RBP14.32□□□□□ -0.12
CHD1-202ENST00000414220 MYLKQ15746 1914 aa14.32□□□□□ -0.12
CHD1-202ENST00000414220 TPRP12270 2363 aaKnown RBP14.31□□□□□ -0.12
CHD1-202ENST00000414220 TAF4O00268 1085 aa14.31□□□□□ -0.12
CHD1-202ENST00000414220 POLR1CO15160 346 aaPredicted RBP14.31□□□□□ -0.12
CHD1-202ENST00000414220 GPC4O75487 556 aa14.31□□□□□ -0.12
CHD1-202ENST00000414220 SLCO2B1O94956 709 aa14.31□□□□□ -0.12
CHD1-202ENST00000414220 ITIH1P19827 911 aa14.31□□□□□ -0.12
CHD1-202ENST00000414220 ACADLP28330 430 aa14.31□□□□□ -0.12
CHD1-202ENST00000414220 SLC5A2P31639 672 aa14.31□□□□□ -0.12
CHD1-202ENST00000414220 ELK3P41970 407 aa14.31□□□□□ -0.12
CHD1-202ENST00000414220 RPL21P46778 160 aaKnown RBP14.31□□□□□ -0.12
CHD1-202ENST00000414220 GFERP55789 205 aa14.31□□□□□ -0.12
CHD1-202ENST00000414220 PDIA2Q13087 525 aaKnown RBP14.31□□□□□ -0.12
CHD1-202ENST00000414220 PRKG2Q13237 762 aa14.31□□□□□ -0.12
CHD1-202ENST00000414220 CTBP1Q13363 440 aa14.31□□□□□ -0.12
CHD1-202ENST00000414220 TMTC4Q5T4D3 741 aa14.31□□□□□ -0.12
CHD1-202ENST00000414220 C8orf74Q6P047 294 aa14.31□□□□□ -0.12
CHD1-202ENST00000414220 NAPRTQ6XQN6 538 aa14.31□□□□□ -0.12
CHD1-202ENST00000414220 FAM92BQ6ZTR7 304 aa14.31□□□□□ -0.12
CHD1-202ENST00000414220 KIAA0408Q6ZU52 694 aa14.31□□□□□ -0.12
CHD1-202ENST00000414220 ZNF572Q7Z3I7 529 aaPredicted RBP14.31□□□□□ -0.12
CHD1-202ENST00000414220 KMT5CQ86Y97 462 aa14.31□□□□□ -0.12
CHD1-202ENST00000414220 PALM2Q8IXS6 379 aa14.31□□□□□ -0.12
CHD1-202ENST00000414220 CFAP61Q8NHU2 1237 aa14.31□□□□□ -0.12
CHD1-202ENST00000414220 CERS2Q96G23 380 aa14.31□□□□□ -0.12
CHD1-202ENST00000414220 CFAP36Q96G28 342 aa14.31□□□□□ -0.12
CHD1-202ENST00000414220 HGH1Q9BTY7 390 aa14.31□□□□□ -0.12
CHD1-202ENST00000414220 DDA1Q9BW61 102 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms