RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 DNAJC7Q99615 494 aa16.22■□□□□ 0.19
MRPL55-220ENST00000411464 DHRS4Q9BTZ2 278 aa16.22■□□□□ 0.19
MRPL55-220ENST00000411464 FKBPLQ9UIM3 349 aa16.22■□□□□ 0.19
MRPL55-220ENST00000411464 CRLS1Q9UJA2 301 aa16.22■□□□□ 0.19
MRPL55-220ENST00000411464 CFAP99D6REC4 459 aa16.21■□□□□ 0.19
MRPL55-220ENST00000411464 IFRD1O00458 451 aaPredicted RBP16.21■□□□□ 0.19
MRPL55-220ENST00000411464 ZNF749O43361 778 aa16.21■□□□□ 0.19
MRPL55-220ENST00000411464 ANXA9O76027 345 aa16.21■□□□□ 0.19
MRPL55-220ENST00000411464 ALPPP05187 535 aa16.21■□□□□ 0.19
MRPL55-220ENST00000411464 ST6GAL1P15907 406 aa16.21■□□□□ 0.19
MRPL55-220ENST00000411464 OTX2P32243 289 aa16.21■□□□□ 0.19
MRPL55-220ENST00000411464 HADHAP40939 763 aa16.21■□□□□ 0.19
MRPL55-220ENST00000411464 LMAN1P49257 510 aa16.21■□□□□ 0.19
MRPL55-220ENST00000411464 GEMP55040 296 aa16.21■□□□□ 0.19
MRPL55-220ENST00000411464 TAZQ16635 292 aa16.21■□□□□ 0.19
MRPL55-220ENST00000411464 TFDP3Q5H9I0 405 aa16.21■□□□□ 0.19
MRPL55-220ENST00000411464 LYPLAL1Q5VWZ2 237 aa16.21■□□□□ 0.19
MRPL55-220ENST00000411464 ZNF449Q6P9G9 518 aa16.21■□□□□ 0.19
MRPL55-220ENST00000411464 SPOCD1Q6ZMY3 1216 aa16.21■□□□□ 0.19
MRPL55-220ENST00000411464 HOOK3Q86VS8 718 aa16.21■□□□□ 0.19
MRPL55-220ENST00000411464 ULK4Q96C45 1275 aa16.21■□□□□ 0.19
MRPL55-220ENST00000411464 RBM41Q96IZ5 413 aaKnown RBP16.21■□□□□ 0.19
MRPL55-220ENST00000411464 FER1L6-AS2Q96M78 137 aa16.21■□□□□ 0.19
MRPL55-220ENST00000411464 C17orf62Q9BQA9 187 aa16.21■□□□□ 0.19
MRPL55-220ENST00000411464 FICDQ9BVA6 458 aa16.21■□□□□ 0.19
MRPL55-220ENST00000411464 PITPNM3Q9BZ71 974 aa16.21■□□□□ 0.19
MRPL55-220ENST00000411464 KLHL25Q9H0H3 589 aa16.21■□□□□ 0.19
MRPL55-220ENST00000411464 SPTLC3Q9NUV7 552 aa16.21■□□□□ 0.19
MRPL55-220ENST00000411464 B3GNT3Q9Y2A9 372 aa16.21■□□□□ 0.19
MRPL55-220ENST00000411464 C17orf113A0A1B0GUU1 675 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 SYCE3A1L190 88 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 WIPF3A6NGB9 483 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 C2orf74A8MZ97 194 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 HACD1B0YJ81 288 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 BTN3A3O00478 584 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 BTN3A1O00481 513 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 PEX12O00623 359 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 SGTAO43765 313 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 KLHL41O60662 606 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 IGHEP01854 428 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 ATP1B2P14415 290 aaPredicted RBP16.2■□□□□ 0.18
MRPL55-220ENST00000411464 COL8A1P27658 744 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 PRLHRP49683 370 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 TRIM14Q14142 442 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 SSPNQ14714 243 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 MLIPQ5VWP3 458 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 ZNF787Q6DD87 383 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 SARM1Q6SZW1 724 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 MRGPREQ86SM8 312 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 AMIGO1Q86WK6 493 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 CISD2Q8N5K1 135 aaKnown RBP16.2■□□□□ 0.18
MRPL55-220ENST00000411464 CLEC1AQ8NC01 280 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 PHC3Q8NDX5 983 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 HEXDCQ8WVB3 486 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 HAUS1Q96CS2 278 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 QKIQ96PU8 341 aaKnown RBP eCLIP16.2■□□□□ 0.18
MRPL55-220ENST00000411464 TRAPPC9Q96Q05 1148 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 COPS8Q99627 209 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 TFB2MQ9H5Q4 396 aaKnown RBP16.2■□□□□ 0.18
MRPL55-220ENST00000411464 MVB12BQ9H7P6 319 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 ASF1BQ9NVP2 202 aa16.2■□□□□ 0.18
MRPL55-220ENST00000411464 GPN3Q9UHW5 284 aaPredicted RBP16.2■□□□□ 0.18
MRPL55-220ENST00000411464 ERRFI1Q9UJM3 462 aaPredicted RBP16.2■□□□□ 0.18
MRPL55-220ENST00000411464 TNRC6AQ8NDV7 1962 aaKnown RBP16.19■□□□□ 0.18
MRPL55-220ENST00000411464 PSTPIP1O43586 416 aa16.19■□□□□ 0.18
MRPL55-220ENST00000411464 LDB2O43679 373 aa16.19■□□□□ 0.18
MRPL55-220ENST00000411464 KLF7O75840 302 aaPredicted RBP16.19■□□□□ 0.18
MRPL55-220ENST00000411464 ZRANB2O95218 330 aaKnown RBP eCLIP16.19■□□□□ 0.18
MRPL55-220ENST00000411464 CBX6O95503 412 aa16.19■□□□□ 0.18
MRPL55-220ENST00000411464 CRTAMO95727 393 aa16.19■□□□□ 0.18
MRPL55-220ENST00000411464 LDLRP01130 860 aa16.19■□□□□ 0.18
MRPL55-220ENST00000411464 CD63P08962 238 aa16.19■□□□□ 0.18
MRPL55-220ENST00000411464 PVRP15151 417 aa16.19■□□□□ 0.18
MRPL55-220ENST00000411464 CD151P48509 253 aa16.19■□□□□ 0.18
MRPL55-220ENST00000411464 ELOAQ14241 798 aaKnown RBP16.19■□□□□ 0.18
MRPL55-220ENST00000411464 RANBP10Q6VN20 620 aa16.19■□□□□ 0.18
MRPL55-220ENST00000411464 CDHR3Q6ZTQ4 885 aa16.19■□□□□ 0.18
MRPL55-220ENST00000411464 RCOR2Q8IZ40 523 aa16.19■□□□□ 0.18
MRPL55-220ENST00000411464 OR52E1Q8NGJ3 308 aa16.19■□□□□ 0.18
MRPL55-220ENST00000411464 TM9SF4Q92544 642 aa16.19■□□□□ 0.18
MRPL55-220ENST00000411464 TCTN2Q96GX1 697 aa16.19■□□□□ 0.18
MRPL55-220ENST00000411464 C5orf34Q96MH7 638 aa16.19■□□□□ 0.18
MRPL55-220ENST00000411464 CHP1Q99653 195 aa16.19■□□□□ 0.18
MRPL55-220ENST00000411464 FERMT1Q9BQL6 677 aa16.19■□□□□ 0.18
MRPL55-220ENST00000411464 ILKAPQ9H0C8 392 aaPredicted RBP16.19■□□□□ 0.18
MRPL55-220ENST00000411464 GBA3Q9H227 469 aa16.19■□□□□ 0.18
MRPL55-220ENST00000411464 VPS37BQ9H9H4 285 aa16.19■□□□□ 0.18
MRPL55-220ENST00000411464 NHEJ1Q9H9Q4 299 aaPredicted RBP16.19■□□□□ 0.18
MRPL55-220ENST00000411464 SLC5A6Q9Y289 635 aa16.19■□□□□ 0.18
MRPL55-220ENST00000411464 AP1M2Q9Y6Q5 423 aa16.19■□□□□ 0.18
MRPL55-220ENST00000411464 ESPL1Q14674 2120 aa16.18■□□□□ 0.18
MRPL55-220ENST00000411464 AGAP14A8MT82 685 aa16.18■□□□□ 0.18
MRPL55-220ENST00000411464 H7C0C1 242 aa16.18■□□□□ 0.18
MRPL55-220ENST00000411464 OR2B3O76000 313 aa16.18■□□□□ 0.18
MRPL55-220ENST00000411464 IPO13O94829 963 aaKnown RBP16.18■□□□□ 0.18
MRPL55-220ENST00000411464 CLDN1O95832 211 aa16.18■□□□□ 0.18
MRPL55-220ENST00000411464 TPM1P09493 284 aa16.18■□□□□ 0.18
MRPL55-220ENST00000411464 ITGALP20701 1170 aa16.18■□□□□ 0.18
MRPL55-220ENST00000411464 DCTP40126 519 aa16.18■□□□□ 0.18
MRPL55-220ENST00000411464 ATP5OP48047 213 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms