RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 TRABD2BA6NFA1 517 aa21.79■■□□□ 1.08
PTCD3-203ENST00000409783 KPNA5O15131 536 aa21.79■■□□□ 1.08
PTCD3-203ENST00000409783 CAPNS1P04632 268 aa21.79■■□□□ 1.08
PTCD3-203ENST00000409783 PROS1P07225 676 aa21.79■■□□□ 1.08
PTCD3-203ENST00000409783 NDUFS1P28331 727 aa21.79■■□□□ 1.08
PTCD3-203ENST00000409783 MAPK9P45984 424 aa21.79■■□□□ 1.08
PTCD3-203ENST00000409783 CLCN7P51798 805 aa21.79■■□□□ 1.08
PTCD3-203ENST00000409783 LIMK2P53671 638 aa21.79■■□□□ 1.08
PTCD3-203ENST00000409783 TIAL1Q01085 375 aaKnown RBP eCLIP21.79■■□□□ 1.08
PTCD3-203ENST00000409783 MGAT5Q09328 741 aa21.79■■□□□ 1.08
PTCD3-203ENST00000409783 PLEKHS1Q5SXH7 462 aa21.79■■□□□ 1.08
PTCD3-203ENST00000409783 OTOAQ7RTW8 1153 aa21.79■■□□□ 1.08
PTCD3-203ENST00000409783 SPNS2Q8IVW8 549 aa21.79■■□□□ 1.08
PTCD3-203ENST00000409783 GIMAP7Q8NHV1 300 aa21.79■■□□□ 1.08
PTCD3-203ENST00000409783 FAM136AQ96C01 138 aa21.79■■□□□ 1.08
PTCD3-203ENST00000409783 LIN37Q96GY3 246 aaPredicted RBP21.79■■□□□ 1.08
PTCD3-203ENST00000409783 AHCYL2Q96HN2 611 aaKnown RBP21.79■■□□□ 1.08
PTCD3-203ENST00000409783 C9orf72Q96LT7 481 aa21.79■■□□□ 1.08
PTCD3-203ENST00000409783 FERD3LQ96RJ6 166 aa21.79■■□□□ 1.08
PTCD3-203ENST00000409783 SLC30A3Q99726 388 aa21.79■■□□□ 1.08
PTCD3-203ENST00000409783 DPYSL5Q9BPU6 564 aa21.79■■□□□ 1.08
PTCD3-203ENST00000409783 AARSD1Q9BTE6 412 aaKnown RBP21.79■■□□□ 1.08
PTCD3-203ENST00000409783 FAM129AQ9BZQ8 928 aa21.79■■□□□ 1.08
PTCD3-203ENST00000409783 NRSN2Q9GZP1 204 aa21.79■■□□□ 1.08
PTCD3-203ENST00000409783 PPANQ9NQ55 473 aaKnown RBP21.79■■□□□ 1.08
PTCD3-203ENST00000409783 SMYD2Q9NRG4 433 aa21.79■■□□□ 1.08
PTCD3-203ENST00000409783 ESPNB1AK53 854 aa21.78■■□□□ 1.08
PTCD3-203ENST00000409783 THRAP10827 490 aa21.78■■□□□ 1.08
PTCD3-203ENST00000409783 TYRP1P17643 537 aa21.78■■□□□ 1.08
PTCD3-203ENST00000409783 CHRM3P20309 590 aa21.78■■□□□ 1.08
PTCD3-203ENST00000409783 MAGEA4P43358 317 aa21.78■■□□□ 1.08
PTCD3-203ENST00000409783 ABCG1P45844 678 aa21.78■■□□□ 1.08
PTCD3-203ENST00000409783 CAPZBP47756 277 aa21.78■■□□□ 1.08
PTCD3-203ENST00000409783 RTP5Q14D33 572 aa21.78■■□□□ 1.08
PTCD3-203ENST00000409783 TMED2Q15363 201 aa21.78■■□□□ 1.08
PTCD3-203ENST00000409783 CAPN12Q6ZSI9 719 aa21.78■■□□□ 1.08
PTCD3-203ENST00000409783 CYS1Q717R9 158 aa21.78■■□□□ 1.08
PTCD3-203ENST00000409783 CCDC25Q86WR0 208 aa21.78■■□□□ 1.08
PTCD3-203ENST00000409783 PALM2Q8IXS6 379 aa21.78■■□□□ 1.08
PTCD3-203ENST00000409783 OR5AR1Q8NGP9 310 aa21.78■■□□□ 1.08
PTCD3-203ENST00000409783 GABPB2Q8TAK5 448 aaPredicted RBP21.78■■□□□ 1.08
PTCD3-203ENST00000409783 NCSTNQ92542 709 aa21.78■■□□□ 1.08
PTCD3-203ENST00000409783 KCNJ9Q92806 393 aa21.78■■□□□ 1.08
PTCD3-203ENST00000409783 NRTNQ99748 197 aa21.78■■□□□ 1.08
PTCD3-203ENST00000409783 PSAT1Q9Y617 370 aa21.78■■□□□ 1.08
PTCD3-203ENST00000409783 COMMD10Q9Y6G5 202 aa21.78■■□□□ 1.08
PTCD3-203ENST00000409783 MN1Q10571 1320 aaPredicted RBP21.78■■□□□ 1.08
PTCD3-203ENST00000409783 FRYQ5TBA9 3013 aa21.77■■□□□ 1.08
PTCD3-203ENST00000409783 PMS2P1A4D2B8 440 aa21.77■■□□□ 1.08
PTCD3-203ENST00000409783 C9P02748 559 aa21.77■■□□□ 1.08
PTCD3-203ENST00000409783 TPBGLP0DKB5 382 aa21.77■■□□□ 1.08
PTCD3-203ENST00000409783 MPSTP25325 297 aa21.77■■□□□ 1.08
PTCD3-203ENST00000409783 TBC1D21Q8IYX1 336 aa21.77■■□□□ 1.08
PTCD3-203ENST00000409783 ZBTB2Q8N680 514 aa21.77■■□□□ 1.08
PTCD3-203ENST00000409783 ACVR1CQ8NER5 493 aa21.77■■□□□ 1.08
PTCD3-203ENST00000409783 PRR11Q96HE9 360 aaPredicted RBP21.77■■□□□ 1.08
PTCD3-203ENST00000409783 CCDC74BQ96LY2 380 aa21.77■■□□□ 1.08
PTCD3-203ENST00000409783 MCMBPQ9BTE3 642 aa21.77■■□□□ 1.08
PTCD3-203ENST00000409783 RAB33BQ9H082 229 aa21.77■■□□□ 1.08
PTCD3-203ENST00000409783 LRRC4CQ9HCJ2 640 aa21.77■■□□□ 1.08
PTCD3-203ENST00000409783 KLHL42Q9P2K6 505 aa21.77■■□□□ 1.08
PTCD3-203ENST00000409783 EPHA6Q9UF33 1036 aa21.77■■□□□ 1.08
PTCD3-203ENST00000409783 ASF1AQ9Y294 204 aa21.77■■□□□ 1.08
PTCD3-203ENST00000409783 TCRBV9S1A1TA0A576 114 aa21.76■■□□□ 1.07
PTCD3-203ENST00000409783 C1QTNF9BB2RNN3 333 aa21.76■■□□□ 1.07
PTCD3-203ENST00000409783 TMX2-CTNND1H3BSU7 103 aa21.76■■□□□ 1.07
PTCD3-203ENST00000409783 GSTA2P09210 222 aa21.76■■□□□ 1.07
PTCD3-203ENST00000409783 C1QTNF9P0C862 333 aa21.76■■□□□ 1.07
PTCD3-203ENST00000409783 AMD1P17707 334 aa21.76■■□□□ 1.07
PTCD3-203ENST00000409783 ATP5DP30049 168 aa21.76■■□□□ 1.07
PTCD3-203ENST00000409783 GFERP55789 205 aa21.76■■□□□ 1.07
PTCD3-203ENST00000409783 C16orf72Q14CZ0 275 aa21.76■■□□□ 1.07
PTCD3-203ENST00000409783 RBM20Q5T481 1227 aaKnown RBP21.76■■□□□ 1.07
PTCD3-203ENST00000409783 C3orf62Q6ZUJ4 267 aa21.76■■□□□ 1.07
PTCD3-203ENST00000409783 ARHGAP22Q7Z5H3 698 aa21.76■■□□□ 1.07
PTCD3-203ENST00000409783 SIDT2Q8NBJ9 832 aaKnown RBP21.76■■□□□ 1.07
PTCD3-203ENST00000409783 OR52E1Q8NGJ3 308 aa21.76■■□□□ 1.07
PTCD3-203ENST00000409783 OR5K2Q8NHB8 316 aa21.76■■□□□ 1.07
PTCD3-203ENST00000409783 NDNQ99608 321 aa21.76■■□□□ 1.07
PTCD3-203ENST00000409783 HGH1Q9BTY7 390 aa21.76■■□□□ 1.07
PTCD3-203ENST00000409783 CCDC68Q9H2F9 335 aa21.76■■□□□ 1.07
PTCD3-203ENST00000409783 TFB2MQ9H5Q4 396 aaKnown RBP21.76■■□□□ 1.07
PTCD3-203ENST00000409783 ZFATQ9P243 1243 aa21.76■■□□□ 1.07
PTCD3-203ENST00000409783 DHRS7Q9Y394 339 aa21.76■■□□□ 1.07
PTCD3-203ENST00000409783 CCDC187A0A096LP49 1063 aa21.75■■□□□ 1.07
PTCD3-203ENST00000409783 CXorf49A8MYA2 514 aaPredicted RBP21.75■■□□□ 1.07
PTCD3-203ENST00000409783 E5RI56 91 aa21.75■■□□□ 1.07
PTCD3-203ENST00000409783 PIAS1O75925 651 aa21.75■■□□□ 1.07
PTCD3-203ENST00000409783 PPP1CAP62136 330 aa21.75■■□□□ 1.07
PTCD3-203ENST00000409783 ABRQ12979 859 aa21.75■■□□□ 1.07
PTCD3-203ENST00000409783 PRKG2Q13237 762 aa21.75■■□□□ 1.07
PTCD3-203ENST00000409783 TRA2AQ13595 282 aaKnown RBP eCLIP21.75■■□□□ 1.07
PTCD3-203ENST00000409783 KRT33BQ14525 404 aa21.75■■□□□ 1.07
PTCD3-203ENST00000409783 PLCL1Q15111 1095 aa21.75■■□□□ 1.07
PTCD3-203ENST00000409783 ACSBG2Q5FVE4 666 aa21.75■■□□□ 1.07
PTCD3-203ENST00000409783 PHF19Q5T6S3 580 aa21.75■■□□□ 1.07
PTCD3-203ENST00000409783 UNQ6494/PRO21346Q6UXR6 183 aa21.75■■□□□ 1.07
PTCD3-203ENST00000409783 UNC5DQ6UXZ4 953 aa21.75■■□□□ 1.07
PTCD3-203ENST00000409783 SLC26A11Q86WA9 606 aa21.75■■□□□ 1.07
PTCD3-203ENST00000409783 RCBTB1Q8NDN9 531 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms