RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 PCDHA9Q9Y5H5 950 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 LOC730098B7Z3J9 87 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 HOXC11O43248 304 aaPredicted RBP19.71■□□□□ 0.75
USP39-204ENST00000409766 SGTAO43765 313 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 ASLP04424 464 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 C8GP07360 202 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 G6PDP11413 515 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 NFKBIAP25963 317 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 PRKG2Q13237 762 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 NFYCQ13952 458 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 ZXDCQ2QGD7 858 aaPredicted RBP19.71■□□□□ 0.75
USP39-204ENST00000409766 PLEKHS1Q5SXH7 462 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 TMEM154Q6P9G4 183 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 TTC23LQ6PF05 361 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 ZFAND4Q86XD8 727 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 C7orf61Q8IZ16 206 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 ICA1LQ8NDH6 482 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 ADCY4Q8NFM4 1077 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 HCAR2Q8TDS4 363 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 SLCO4A1Q96BD0 722 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 BTBD9Q96Q07 612 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 ACTL8Q9H568 366 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 LEF1Q9UJU2 399 aaPredicted RBP19.71■□□□□ 0.75
USP39-204ENST00000409766 MAGEA13PA6NCF6 341 aa19.7■□□□□ 0.74
USP39-204ENST00000409766 FFAR3O14843 346 aa19.7■□□□□ 0.74
USP39-204ENST00000409766 ANKRD28O15084 1053 aa19.7■□□□□ 0.74
USP39-204ENST00000409766 GPR42O15529 346 aa19.7■□□□□ 0.74
USP39-204ENST00000409766 MPC1LP0DKB6 136 aa19.7■□□□□ 0.74
USP39-204ENST00000409766 EPORP19235 508 aa19.7■□□□□ 0.74
USP39-204ENST00000409766 PIK3CGP48736 1102 aa19.7■□□□□ 0.74
USP39-204ENST00000409766 SPATS1Q496A3 300 aa19.7■□□□□ 0.74
USP39-204ENST00000409766 CYP20A1Q6UW02 462 aa19.7■□□□□ 0.74
USP39-204ENST00000409766 DPPA4Q7L190 304 aa19.7■□□□□ 0.74
USP39-204ENST00000409766 TRIM46Q7Z4K8 759 aa19.7■□□□□ 0.74
USP39-204ENST00000409766 TRAM1L1Q8N609 369 aa19.7■□□□□ 0.74
USP39-204ENST00000409766 ZNF366Q8N895 744 aa19.7■□□□□ 0.74
USP39-204ENST00000409766 KIAA1958Q8N8K9 716 aa19.7■□□□□ 0.74
USP39-204ENST00000409766 WFIKKN2Q8TEU8 576 aa19.7■□□□□ 0.74
USP39-204ENST00000409766 TMEM125Q96AQ2 219 aa19.7■□□□□ 0.74
USP39-204ENST00000409766 PPP3R2Q96LZ3 170 aa19.7■□□□□ 0.74
USP39-204ENST00000409766 RIOK2Q9BVS4 552 aaKnown RBP19.7■□□□□ 0.74
USP39-204ENST00000409766 SLC32A1Q9H598 525 aa19.7■□□□□ 0.74
USP39-204ENST00000409766 PIDD1Q9HB75 910 aa19.7■□□□□ 0.74
USP39-204ENST00000409766 SLC27A6Q9Y2P4 619 aa19.7■□□□□ 0.74
USP39-204ENST00000409766 C16orf96A6NNT2 1141 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 FADS2P1A8MWK0 482 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 CFAP99D6REC4 459 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 WDR47O94967 919 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 SLC7A1P30825 629 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 VIPR2P41587 438 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 BOP1Q14137 746 aaKnown RBP19.69■□□□□ 0.74
USP39-204ENST00000409766 TIGD2Q4W5G0 525 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 PDE12Q6L8Q7 609 aaKnown RBP19.69■□□□□ 0.74
USP39-204ENST00000409766 TECPR1Q7Z6L1 1165 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 CATSPER1Q8NEC5 780 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 DDHD1Q8NEL9 900 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 SMG7Q92540 1137 aaKnown RBP19.69■□□□□ 0.74
USP39-204ENST00000409766 ZUFSPQ96AP4 578 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 ZSCAN5AQ9BUG6 496 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 CXorf56Q9H5V9 222 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 RAD18Q9NS91 495 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 FARSBQ9NSD9 589 aaKnown RBP19.69■□□□□ 0.74
USP39-204ENST00000409766 TRANK1O15050 2925 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 DYTNA2CJ06 578 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 GFYI3L273 518 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 KPNA5O15131 536 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 RGS14O43566 566 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 ULK1O75385 1050 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 TULP3O75386 442 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 AP2A2O94973 939 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 ADH1CP00326 375 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 ATP6V1B2P21281 511 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 POM121L1PQ3SYA9 428 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 ADGRD2Q7Z7M1 963 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 C12orf76Q8N812 135 aaPredicted RBP19.69■□□□□ 0.74
USP39-204ENST00000409766 SKA2Q8WVK7 121 aaPredicted RBP19.69■□□□□ 0.74
USP39-204ENST00000409766 YY1AP1Q9H869 796 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 KLQ9UEF7 1012 aa19.69■□□□□ 0.74
USP39-204ENST00000409766 SLC28A1O00337 649 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 RNASEH1O60930 286 aaKnown RBP19.68■□□□□ 0.74
USP39-204ENST00000409766 STAMBPO95630 424 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 XPAP23025 273 aaPredicted RBP19.68■□□□□ 0.74
USP39-204ENST00000409766 MMP12P39900 470 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 MESP2Q0VG99 397 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 BNIP2Q12982 314 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 SMU1Q2TAY7 513 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 ETFBKMTQ8IXQ9 262 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 KIAA2013Q8IYS2 634 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 TCAIMQ8N3R3 496 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 OR2T34Q8NGX1 318 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 OR2T3Q8NH03 318 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 DNAJB14Q8TBM8 379 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 USP7Q93009 1102 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 TIFAQ96CG3 184 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 TRIM8Q9BZR9 551 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 MTIF3Q9H2K0 278 aaKnown RBP19.68■□□□□ 0.74
USP39-204ENST00000409766 SLAMF8Q9P0V8 285 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 SCOCQ9UIL1 159 aa19.68■□□□□ 0.74
USP39-204ENST00000409766 POLR3HQ9Y535 204 aaPredicted RBP19.68■□□□□ 0.74
USP39-204ENST00000409766 GRXCR2A6NFK2 248 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms