RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 C11orf74Q86VG3 221 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 MFSD6LQ8IWD5 586 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 ADGRG2Q8IZP9 1017 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 VN1R2Q8NFZ6 395 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 NPAS2Q99743 824 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 IL26Q9NPH9 171 aa8.93□□□□□ -0.98
LIG4-202ENST00000405925 INTS7Q9NVH2 962 aaKnown RBP8.93□□□□□ -0.98
LIG4-202ENST00000405925 C6orf203Q9P0P8 240 aaPredicted RBP8.93□□□□□ -0.98
LIG4-202ENST00000405925 LIN7AO14910 233 aaPredicted RBP8.92□□□□□ -0.98
LIG4-202ENST00000405925 NRP2O60462 931 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 ZDHHC11BP0C7U3 371 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 C5AR1P21730 350 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 ACRV1P26436 265 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 CRATP43155 626 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 CDKN1CP49918 316 aaPredicted RBP8.92□□□□□ -0.98
LIG4-202ENST00000405925 HMGCS1Q01581 520 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 METTL21CQ5VZV1 264 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 CYS1Q717R9 158 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 CEP97Q8IW35 865 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 ST13P4Q8IZP2 240 aaPredicted RBP8.92□□□□□ -0.98
LIG4-202ENST00000405925 HM13Q8TCT9 377 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 PPCDCQ96CD2 204 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 KLHDC7BQ96G42 594 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 BOCQ9BWV1 1114 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 MAPRE3Q9UPY8 281 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 GPR39O43194 453 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 TYROBPO43914 113 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 OR10H2O60403 315 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 IFNA14P01570 189 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 ANXA4P09525 319 aaPredicted RBP8.92□□□□□ -0.98
LIG4-202ENST00000405925 SLC35E2BP0CK96 405 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 SLC26A3P40879 764 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 MAGEA6P43360 314 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 PXNP49023 591 aaPredicted RBP8.92□□□□□ -0.98
LIG4-202ENST00000405925 SLC7A2P52569 658 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 PLA2G16P53816 162 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 SLC18A1P54219 525 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 IRX1P78414 480 aaPredicted RBP8.92□□□□□ -0.98
LIG4-202ENST00000405925 MRPS22P82650 360 aaKnown RBP8.92□□□□□ -0.98
LIG4-202ENST00000405925 MED21Q13503 144 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 GRIN2CQ14957 1233 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 SLC5A9Q2M3M2 681 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 CCNYL2Q5T2Q4 361 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 EGFLAMQ63HQ2 1017 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 TMEM198Q66K66 360 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 CXorf57Q6NSI4 855 aaKnown RBP8.92□□□□□ -0.98
LIG4-202ENST00000405925 CD300LGQ6UXG3 332 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 OR2T3Q8NH03 318 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 HLA-CQ95604 372 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 ZSWIM3Q96MP5 696 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 LENG8Q96PV6 779 aaPredicted RBP8.92□□□□□ -0.98
LIG4-202ENST00000405925 OLFM1Q99784 485 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 MIPEPQ99797 713 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 CCDC28BQ9BUN5 200 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 WARS2Q9UGM6 360 aaKnown RBP8.92□□□□□ -0.98
LIG4-202ENST00000405925 IGLV3-10A0A075B6K4 115 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 A0A0G2JN53 185 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 DRD1P21728 446 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 RPL3P39023 403 aaKnown RBP8.92□□□□□ -0.98
LIG4-202ENST00000405925 KIR3DL1P43629 444 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 GALK1P51570 392 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 SEMA3AQ14563 771 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 KPNB1Q14974 876 aaKnown RBP8.92□□□□□ -0.98
LIG4-202ENST00000405925 PRAMEF14Q5SWL7 426 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 PRAMEF13Q5VWM6 474 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 HLA-DQA1Q5Y7H0 255 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 TRAF7Q6Q0C0 670 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 AGTRAPQ6RW13 159 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 CYP4V2Q6ZWL3 525 aaPredicted RBP8.92□□□□□ -0.98
LIG4-202ENST00000405925 FAM129CQ86XR2 697 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 PIANPQ8IYJ0 282 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 RPLP0P6Q8NHW5 317 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 RIN3Q8TB24 985 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 ZCCHC10Q8TBK6 192 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 DNAJC9Q8WXX5 260 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 VPS33AQ96AX1 596 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 TPD52L3Q96J77 140 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 PPM1MQ96MI6 270 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 RNF145Q96MT1 663 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 EBPLQ9BY08 206 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 IL21Q9HBE4 155 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 PPM1HQ9ULR3 514 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 SNX5Q9Y5X3 404 aa8.92□□□□□ -0.98
LIG4-202ENST00000405925 LDB2O43679 373 aa8.91□□□□□ -0.98
LIG4-202ENST00000405925 FKBP6O75344 327 aa8.91□□□□□ -0.98
LIG4-202ENST00000405925 LAMP2P13473 410 aa8.91□□□□□ -0.98
LIG4-202ENST00000405925 ALDH4A1P30038 563 aa8.91□□□□□ -0.98
LIG4-202ENST00000405925 HOXC13P31276 330 aa8.91□□□□□ -0.98
LIG4-202ENST00000405925 IDH3AP50213 366 aa8.91□□□□□ -0.98
LIG4-202ENST00000405925 CDKN2DP55273 166 aa8.91□□□□□ -0.98
LIG4-202ENST00000405925 SLBPQ14493 270 aaKnown RBP eCLIP8.91□□□□□ -0.98
LIG4-202ENST00000405925 PCLAFQ15004 111 aa8.91□□□□□ -0.98
LIG4-202ENST00000405925 AMZ1Q400G9 498 aa8.91□□□□□ -0.98
LIG4-202ENST00000405925 CYP2U1Q7Z449 544 aa8.91□□□□□ -0.98
LIG4-202ENST00000405925 TMEM145Q8NBT3 493 aa8.91□□□□□ -0.98
LIG4-202ENST00000405925 ZFP28Q8NHY6 868 aa8.91□□□□□ -0.98
LIG4-202ENST00000405925 ISG20Q96AZ6 181 aaKnown RBP8.91□□□□□ -0.98
LIG4-202ENST00000405925 ADNPQ9H2P0 1102 aa8.91□□□□□ -0.98
LIG4-202ENST00000405925 TMEM245Q9H330 911 aa8.91□□□□□ -0.98
LIG4-202ENST00000405925 SLC32A1Q9H598 525 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms