RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 TTC1Q99614 292 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 OR52A5Q9H2C5 316 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 LNPEPQ9UIQ6 1025 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 RARRES3Q9UL19 164 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 ZKSCAN5Q9Y2L8 839 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 RPS6KL1Q9Y6S9 549 aa13.06□□□□□ -0.32
VCX3A-202ENST00000398729 CCDC162PA2VCL2 907 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 OR51F1A6NGY5 319 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 MATN2O00339 956 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 SPAG6O75602 509 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 KIAA0754O94854 1291 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 FTH1P02794 183 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 MT-ND3P03897 115 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 FOLR1P15328 257 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 ADRA1DP25100 572 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 FOXN2P32314 431 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 HSD11B2P80365 405 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 MC1RQ01726 317 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 IGFBP7Q16270 282 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 ZNF658BQ4V348 819 aaPredicted RBP13.05□□□□□ -0.32
VCX3A-202ENST00000398729 TSTD2Q5T7W7 516 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 LYPLAL1Q5VWZ2 237 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 DRICH1Q6PGQ1 229 aaPredicted RBP13.05□□□□□ -0.32
VCX3A-202ENST00000398729 BORAQ6PGQ7 559 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 AFTPHQ6ULP2 937 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 PACS1Q6VY07 963 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 NLRP9Q7RTR0 991 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 PTRH1Q86Y79 214 aaKnown RBP13.05□□□□□ -0.32
VCX3A-202ENST00000398729 CARFQ8N187 725 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 GALNT6Q8NCL4 622 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 OR4E2Q8NGC2 313 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 OR13J1Q8NGT2 312 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 MAIP1Q8WWC4 291 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 LCN9Q8WX39 176 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 STARD8Q92502 1023 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 HDAC10Q969S8 669 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 FCRL4Q96PJ5 515 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 SRMSQ9H3Y6 488 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 MVB12BQ9H7P6 319 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 CASS4Q9NQ75 786 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 RIMKLBQ9ULI2 386 aa13.05□□□□□ -0.32
VCX3A-202ENST00000398729 DRG1Q9Y295 367 aaKnown RBP13.05□□□□□ -0.32
VCX3A-202ENST00000398729 PIKFYVEQ9Y2I7 2098 aa13.04□□□□□ -0.32
VCX3A-202ENST00000398729 ICE1Q9Y2F5 2266 aa13.04□□□□□ -0.32
VCX3A-202ENST00000398729 GOLGA6L3A6NEY3 463 aa13.04□□□□□ -0.32
VCX3A-202ENST00000398729 F8W8V4 182 aa13.04□□□□□ -0.32
VCX3A-202ENST00000398729 LIN7AO14910 233 aaPredicted RBP13.04□□□□□ -0.32
VCX3A-202ENST00000398729 NKX2-8O15522 239 aa13.04□□□□□ -0.32
VCX3A-202ENST00000398729 ZBTB11O95625 1053 aaPredicted RBP13.04□□□□□ -0.32
VCX3A-202ENST00000398729 OR56A5P0C7T3 313 aa13.04□□□□□ -0.32
VCX3A-202ENST00000398729 CCNYL3P0C7X3 344 aa13.04□□□□□ -0.32
VCX3A-202ENST00000398729 EBLN1P0CF75 366 aa13.04□□□□□ -0.32
VCX3A-202ENST00000398729 PRKAR1AP10644 381 aa13.04□□□□□ -0.32
VCX3A-202ENST00000398729 POLR2CP19387 275 aaPredicted RBP13.04□□□□□ -0.32
VCX3A-202ENST00000398729 PDHA2P29803 388 aa13.04□□□□□ -0.32
VCX3A-202ENST00000398729 RPL22P35268 128 aaKnown RBP13.04□□□□□ -0.32
VCX3A-202ENST00000398729 GRIA1P42261 906 aa13.04□□□□□ -0.32
VCX3A-202ENST00000398729 PREPP48147 710 aa13.04□□□□□ -0.32
VCX3A-202ENST00000398729 KPNA2P52292 529 aaKnown RBP13.04□□□□□ -0.32
VCX3A-202ENST00000398729 CDC20Q12834 499 aa13.04□□□□□ -0.32
VCX3A-202ENST00000398729 KCNAB1Q14722 419 aa13.04□□□□□ -0.32
VCX3A-202ENST00000398729 SIX1Q15475 284 aaPredicted RBP13.04□□□□□ -0.32
VCX3A-202ENST00000398729 TMTC4Q5T4D3 741 aa13.04□□□□□ -0.32
VCX3A-202ENST00000398729 C4orf22Q6V702 233 aa13.04□□□□□ -0.32
VCX3A-202ENST00000398729 CERS6Q6ZMG9 384 aa13.04□□□□□ -0.32
VCX3A-202ENST00000398729 GSTA5Q7RTV2 222 aa13.04□□□□□ -0.32
VCX3A-202ENST00000398729 PRUNE1Q86TP1 453 aa13.04□□□□□ -0.32
VCX3A-202ENST00000398729 D2HGDHQ8N465 521 aa13.04□□□□□ -0.32
VCX3A-202ENST00000398729 GLIS1Q8NBF1 620 aa13.04□□□□□ -0.32
VCX3A-202ENST00000398729 TFGQ92734 400 aaPredicted RBP13.04□□□□□ -0.32
VCX3A-202ENST00000398729 RNF31Q96EP0 1072 aa13.04□□□□□ -0.32
VCX3A-202ENST00000398729 EPN3Q9H201 632 aa13.04□□□□□ -0.32
VCX3A-202ENST00000398729 FGF21Q9NSA1 209 aa13.04□□□□□ -0.32
VCX3A-202ENST00000398729 CREBBPQ92793 2442 aa13.04□□□□□ -0.32
VCX3A-202ENST00000398729 PRRC2CQ9Y520 2896 aaKnown RBP13.04□□□□□ -0.32
VCX3A-202ENST00000398729 GSAPA4D1B5 854 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 GOT2P00505 430 aaKnown RBP13.03□□□□□ -0.32
VCX3A-202ENST00000398729 FGGP02679 453 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 NTRK1P04629 796 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 ZSCAN5DPP0CG00 497 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 GP1BBP13224 206 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 TCN2P20062 427 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 CDH3P22223 829 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 DLSTP36957 453 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 PPARGP37231 505 aaPredicted RBP13.03□□□□□ -0.32
VCX3A-202ENST00000398729 CCR10P46092 362 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 ARCN1P48444 511 aaKnown RBP13.03□□□□□ -0.32
VCX3A-202ENST00000398729 PRAMEP78395 509 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 CCZ1BP86790 482 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 CCZ1P86791 482 aaPredicted RBP13.03□□□□□ -0.32
VCX3A-202ENST00000398729 PLOD1Q02809 727 aaPredicted RBP13.03□□□□□ -0.32
VCX3A-202ENST00000398729 ACVR1Q04771 509 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 CRTC2Q53ET0 693 aaPredicted RBP13.03□□□□□ -0.32
VCX3A-202ENST00000398729 PHC3Q8NDX5 983 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 PPHLN1Q8NEY8 458 aaKnown RBP13.03□□□□□ -0.32
VCX3A-202ENST00000398729 OR52E1Q8NGJ3 308 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 OR6P1Q8NGX9 317 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 OR4L1Q8NH43 312 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 ELMO1Q92556 727 aa13.03□□□□□ -0.32
VCX3A-202ENST00000398729 PEX13Q92968 403 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms