RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 BLVRAP53004 296 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 PLA2G16P53816 162 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 ADGRE1Q14246 886 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 C9orf64Q5T6V5 341 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 TPRG1Q6ZUI0 275 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 OR8H2Q8N162 312 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 LRRC58Q96CX6 371 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 WNT9AO14904 365 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 DYRK3O43781 588 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 SLC28A2O43868 658 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 FAM189A1O60320 539 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 KRT8P05787 483 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 HLA-EP13747 358 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 PAICSP22234 425 aaKnown RBP12.97□□□□□ -0.33
NPHP4-203ENST00000378169 TLX1P31314 330 aaPredicted RBP12.97□□□□□ -0.33
NPHP4-203ENST00000378169 PTCHD3Q3KNS1 767 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 SLC2A7Q6PXP3 512 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 C11orf84Q9BUA3 381 aaPredicted RBP12.97□□□□□ -0.33
NPHP4-203ENST00000378169 CEP44Q9C0F1 390 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 C11orf49Q9H6J7 331 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 SMPD3Q9NY59 655 aaPredicted RBP12.97□□□□□ -0.33
NPHP4-203ENST00000378169 OGDHLQ9ULD0 1010 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 SAMD4AQ9UPU9 718 aaKnown RBP12.97□□□□□ -0.33
NPHP4-203ENST00000378169 SLC27A6Q9Y2P4 619 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 PCDHGA11Q9Y5H2 935 aa12.97□□□□□ -0.33
NPHP4-203ENST00000378169 TP73O15350 636 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 TEX28O15482 410 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 ZW10O43264 779 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 IL6P05231 212 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 C8GP07360 202 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 PSAPL1Q6NUJ1 521 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 RANBP10Q6VN20 620 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 OR7A2PQ8NGA2 310 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 OR10Q1Q8NGQ4 319 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 HTATIP2Q9BUP3 242 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 MRPS26Q9BYN8 205 aaKnown RBP12.96□□□□□ -0.33
NPHP4-203ENST00000378169 PRRG3Q9BZD7 231 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 FBXL21Q9UKT6 434 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 SQORQ9Y6N5 450 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 M0QZQ0 153 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 LEFTY2O00292 366 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 NUDT14O95848 222 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 S1PR4O95977 384 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 GPIP06744 558 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 DGKKQ5KSL6 1271 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 ZNF678Q5SXM1 525 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 STEAP4Q687X5 459 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 C22orf39Q6P5X5 142 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 FAM171BQ6P995 826 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 VITQ6UXI7 678 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 MRPL10Q7Z7H8 261 aaKnown RBP12.96□□□□□ -0.33
NPHP4-203ENST00000378169 TRIM74Q86UV6 250 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 TERB1Q8NA31 727 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 RAD51AP1Q96B01 352 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 SEZ6LQ9BYH1 1024 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 PDP1Q9P0J1 537 aaPredicted RBP12.96□□□□□ -0.33
NPHP4-203ENST00000378169 EVPLQ92817 2033 aa12.96□□□□□ -0.33
NPHP4-203ENST00000378169 EI24O14681 340 aa12.96□□□□□ -0.34
NPHP4-203ENST00000378169 G6PDP11413 515 aa12.96□□□□□ -0.34
NPHP4-203ENST00000378169 LEPRP48357 1165 aaKnown RBP12.96□□□□□ -0.34
NPHP4-203ENST00000378169 CDKN2DP55273 166 aa12.96□□□□□ -0.34
NPHP4-203ENST00000378169 CPA6Q8N4T0 437 aa12.96□□□□□ -0.34
NPHP4-203ENST00000378169 BEND7Q8N7W2 519 aaPredicted RBP12.96□□□□□ -0.34
NPHP4-203ENST00000378169 ZFP28Q8NHY6 868 aa12.96□□□□□ -0.34
NPHP4-203ENST00000378169 POF1BQ8WVV4 589 aa12.96□□□□□ -0.34
NPHP4-203ENST00000378169 A0A088AWK7 358 aa12.96□□□□□ -0.34
NPHP4-203ENST00000378169 BHMG1C9JSJ3 638 aaPredicted RBP12.96□□□□□ -0.34
NPHP4-203ENST00000378169 TGFB1P01137 390 aa12.96□□□□□ -0.34
NPHP4-203ENST00000378169 CYP11A1P05108 521 aa12.96□□□□□ -0.34
NPHP4-203ENST00000378169 UMPSP11172 480 aa12.96□□□□□ -0.34
NPHP4-203ENST00000378169 ZNF10P21506 573 aaPredicted RBP12.96□□□□□ -0.34
NPHP4-203ENST00000378169 IDSP22304 550 aa12.96□□□□□ -0.34
NPHP4-203ENST00000378169 PKDCCQ504Y2 493 aa12.96□□□□□ -0.34
NPHP4-203ENST00000378169 TECRLQ5HYJ1 363 aa12.96□□□□□ -0.34
NPHP4-203ENST00000378169 DPY19L3Q6ZPD9 716 aa12.96□□□□□ -0.34
NPHP4-203ENST00000378169 WDR48Q8TAF3 677 aa12.96□□□□□ -0.34
NPHP4-203ENST00000378169 MTERF3Q96E29 417 aa12.96□□□□□ -0.34
NPHP4-203ENST00000378169 MIPEPQ99797 713 aa12.96□□□□□ -0.34
NPHP4-203ENST00000378169 SOHLH2Q9NX45 425 aa12.96□□□□□ -0.34
NPHP4-203ENST00000378169 ENOPH1Q9UHY7 261 aa12.96□□□□□ -0.34
NPHP4-203ENST00000378169 FAM234BA2RU67 622 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 MYL12BO14950 172 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 OR1F1O43749 312 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 RFPL2O75678 378 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 ASLP04424 464 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 IFNA16P05015 189 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 PRPS2P11908 318 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 MYL12AP19105 171 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 ETV4P43268 484 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 ASMTP46597 345 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 RXRGP48443 463 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 MAPK12P53778 367 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 C21orf59P57076 290 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 CDC42P60953 191 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 KIAA0319Q5VV43 1072 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 CYS1Q717R9 158 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 ARMC8Q8IUR7 673 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 KLHL23Q8NBE8 558 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 KCNJ9Q92806 393 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 DGCR14Q96DF8 476 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms