RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 ZNF382Q96SR6 550 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 SLC52A3Q9NQ40 469 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 HCFC1R1Q9NWW0 138 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 CRLS1Q9UJA2 301 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 CCL26Q9Y258 94 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 DOCK6Q96HP0 2047 aa13.74□□□□□ -0.21
MSH5-202ENST00000375740 TRBV5-4A0A0C4DH59 114 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 NPIPB15A6NHN6 443 aaPredicted RBP13.73□□□□□ -0.21
MSH5-202ENST00000375740 EFCAB14O75071 495 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 CDH3P22223 829 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 HLA-FP30511 346 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 CCR2P41597 374 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 TUBA4AP68366 448 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 CRTC1Q6UUV9 634 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 ADAMTSL2Q86TH1 951 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 METTL3Q86U44 580 aaKnown RBP13.73□□□□□ -0.21
MSH5-202ENST00000375740 ELMOD1Q8N336 334 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 TEX37Q96LM6 180 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 HOPXQ9BPY8 73 aaPredicted RBP13.73□□□□□ -0.21
MSH5-202ENST00000375740 CXorf21Q9HAI6 301 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 AIG1Q9NVV5 245 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 CNOT11Q9UKZ1 510 aaKnown RBP13.73□□□□□ -0.21
MSH5-202ENST00000375740 TMED5Q9Y3A6 229 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 MYOFQ9NZM1 2061 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 SCN8AQ9UQD0 1980 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 SOCS2O14508 198 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 LSM1O15116 133 aaKnown RBP13.73□□□□□ -0.21
MSH5-202ENST00000375740 FFAR2O15552 330 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 GUCA1CO95843 209 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 C8BP07358 591 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 LINC00271P0C7V0 271 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 SPAM1P38567 509 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 ARL1P40616 181 aaPredicted RBP13.73□□□□□ -0.21
MSH5-202ENST00000375740 SNRPD1P62314 119 aaKnown RBP13.73□□□□□ -0.21
MSH5-202ENST00000375740 RHDQ02161 417 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 SPIDRQ14159 915 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 PCBP2Q15366 365 aaKnown RBP eCLIP13.73□□□□□ -0.212e-9■■■□□ 16.3
MSH5-202ENST00000375740 NHSL2Q5HYW2 709 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 C6orf10Q5SRN2 563 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 LETMD1Q6P1Q0 360 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 CCDC80Q76M96 950 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 GOLGA7Q7Z5G4 137 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 SLC15A4Q8N697 577 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 GPR26Q8NDV2 337 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 ASAH2Q9NR71 780 aa13.73□□□□□ -0.21
MSH5-202ENST00000375740 PTPRSQ13332 1948 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 TPD52L2O43399 206 aaKnown RBP13.72□□□□□ -0.21
MSH5-202ENST00000375740 S100BP04271 92 aaPredicted RBP13.72□□□□□ -0.21
MSH5-202ENST00000375740 ZNF12P17014 697 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 ZNF182P17025 639 aaPredicted RBP13.72□□□□□ -0.21
MSH5-202ENST00000375740 UFM1P61960 85 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 YBX1P67809 324 aaKnown RBP13.72□□□□□ -0.21
MSH5-202ENST00000375740 CAPRIN1Q14444 709 aaKnown RBP13.72□□□□□ -0.21
MSH5-202ENST00000375740 BCL2A1Q16548 175 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 C6orf183Q5T699 404 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 LYPLAL1Q5VWZ2 237 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 ASTLQ6HA08 431 aaPredicted RBP13.72□□□□□ -0.21
MSH5-202ENST00000375740 CHST15Q7LFX5 561 aaPredicted RBP13.72□□□□□ -0.21
MSH5-202ENST00000375740 TMEM25Q86YD3 366 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 CBARPQ8N350 705 aaPredicted RBP13.72□□□□□ -0.21
MSH5-202ENST00000375740 C19orf43Q9BQ61 176 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 C1orf50Q9BV19 199 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 NPLQ9BXD5 320 aaPredicted RBP13.72□□□□□ -0.21
MSH5-202ENST00000375740 NSUN3Q9H649 340 aaKnown RBP13.72□□□□□ -0.21
MSH5-202ENST00000375740 SACM1LQ9NTJ5 587 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 CDH7Q9ULB5 785 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 SLC8A2Q9UPR5 921 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 TNPO3Q9Y5L0 923 aaKnown RBP13.72□□□□□ -0.21
MSH5-202ENST00000375740 NME4O00746 187 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 OR7A17O14581 309 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 RAD51BO15315 384 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 KATNA1O75449 491 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 ADH1AP07327 375 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 CAPN1P07384 714 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 DGKAP23743 735 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 RGS4P49798 205 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 GTF2H2Q13888 395 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 FUT11Q495W5 492 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 C6orf136Q5SQH8 315 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 GPRC6AQ5T6X5 926 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 ANKRD26P1Q6NSI1 321 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 GTF2H2CQ6P1K8 395 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 Q6ZSR9 355 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 MINDY1Q8N5J2 469 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 METTL6Q8TCB7 284 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 CHPT1Q8WUD6 406 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 SCRN2Q96FV2 425 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 FAM126AQ9BYI3 521 aaPredicted RBP13.72□□□□□ -0.21
MSH5-202ENST00000375740 SUV39H2Q9H5I1 410 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 C11orf49Q9H6J7 331 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 RIC8BQ9NVN3 520 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 ELOVL2Q9NXB9 296 aa13.72□□□□□ -0.21
MSH5-202ENST00000375740 ZBBXA8MT70 800 aa13.71□□□□□ -0.21
MSH5-202ENST00000375740 FXYD1O00168 92 aa13.71□□□□□ -0.21
MSH5-202ENST00000375740 TAPBPO15533 448 aa13.71□□□□□ -0.21
MSH5-202ENST00000375740 SULT1C4O75897 302 aa13.71□□□□□ -0.21
MSH5-202ENST00000375740 ZFP36L2P47974 494 aaKnown RBP13.71□□□□□ -0.21
MSH5-202ENST00000375740 HSPA7P48741 367 aa13.71□□□□□ -0.21
MSH5-202ENST00000375740 GRIK2Q13002 908 aa13.71□□□□□ -0.21
MSH5-202ENST00000375740 ITGADQ13349 1161 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms