RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 PON2Q15165 354 aa20.78■□□□□ 0.92
UPF3A-202ENST00000375299 PHKG1Q16816 387 aa20.78■□□□□ 0.92
UPF3A-202ENST00000375299 OVOS1Q6IE37 1185 aa20.78■□□□□ 0.92
UPF3A-202ENST00000375299 AGMOQ6ZNB7 445 aa20.78■□□□□ 0.92
UPF3A-202ENST00000375299 SLC22A16Q86VW1 577 aa20.78■□□□□ 0.92
UPF3A-202ENST00000375299 HIPK1Q86Z02 1210 aa20.78■□□□□ 0.92
UPF3A-202ENST00000375299 ATP6V0D2Q8N8Y2 350 aa20.78■□□□□ 0.92
UPF3A-202ENST00000375299 OR4K2Q8NGD2 314 aa20.78■□□□□ 0.92
UPF3A-202ENST00000375299 EEF1AKMT1Q8WVE0 214 aa20.78■□□□□ 0.92
UPF3A-202ENST00000375299 PARK7Q99497 189 aaKnown RBP20.78■□□□□ 0.92
UPF3A-202ENST00000375299 ZBTB18Q99592 522 aa20.78■□□□□ 0.92
UPF3A-202ENST00000375299 TBCDQ9BTW9 1192 aa20.78■□□□□ 0.92
UPF3A-202ENST00000375299 FBXO10Q9UK96 956 aa20.78■□□□□ 0.92
UPF3A-202ENST00000375299 SPO11Q9Y5K1 396 aa20.78■□□□□ 0.92
UPF3A-202ENST00000375299 PRMT5O14744 637 aaPredicted RBP20.77■□□□□ 0.92
UPF3A-202ENST00000375299 MYO1DO94832 1006 aa20.77■□□□□ 0.92
UPF3A-202ENST00000375299 NTRK1P04629 796 aa20.77■□□□□ 0.92
UPF3A-202ENST00000375299 PFKLP17858 780 aa20.77■□□□□ 0.92
UPF3A-202ENST00000375299 ACVRL1P37023 503 aa20.77■□□□□ 0.92
UPF3A-202ENST00000375299 IL2P60568 153 aa20.77■□□□□ 0.92
UPF3A-202ENST00000375299 PARP15Q460N3 678 aa20.77■□□□□ 0.92
UPF3A-202ENST00000375299 FBXL22Q6P050 247 aa20.77■□□□□ 0.92
UPF3A-202ENST00000375299 THEM5Q8N1Q8 247 aa20.77■□□□□ 0.92
UPF3A-202ENST00000375299 SETD9Q8NE22 299 aa20.77■□□□□ 0.92
UPF3A-202ENST00000375299 TRIB3Q96RU7 358 aa20.77■□□□□ 0.92
UPF3A-202ENST00000375299 DCAF13Q9NV06 445 aaKnown RBP20.77■□□□□ 0.92
UPF3A-202ENST00000375299 DNAH12Q6ZR08 3092 aa20.77■□□□□ 0.92
UPF3A-202ENST00000375299 FTH1P02794 183 aa20.77■□□□□ 0.91
UPF3A-202ENST00000375299 SERPINF2P08697 491 aa20.77■□□□□ 0.91
UPF3A-202ENST00000375299 AKT1P31749 480 aa20.77■□□□□ 0.91
UPF3A-202ENST00000375299 NPTX1Q15818 432 aa20.77■□□□□ 0.91
UPF3A-202ENST00000375299 SYT6Q5T7P8 510 aaPredicted RBP20.77■□□□□ 0.91
UPF3A-202ENST00000375299 RAP1GAP2Q684P5 730 aa20.77■□□□□ 0.91
UPF3A-202ENST00000375299 B3GNT8Q7Z7M8 397 aa20.77■□□□□ 0.91
UPF3A-202ENST00000375299 GPR149Q86SP6 731 aa20.77■□□□□ 0.91
UPF3A-202ENST00000375299 CIR1Q86X95 450 aaPredicted RBP20.77■□□□□ 0.91
UPF3A-202ENST00000375299 MICU2Q8IYU8 434 aa20.77■□□□□ 0.91
UPF3A-202ENST00000375299 CD200R1Q8TD46 325 aa20.77■□□□□ 0.91
UPF3A-202ENST00000375299 NCLNQ969V3 563 aa20.77■□□□□ 0.91
UPF3A-202ENST00000375299 PTPN18Q99952 460 aa20.77■□□□□ 0.91
UPF3A-202ENST00000375299 NUDT4Q9NZJ9 180 aa20.77■□□□□ 0.91
UPF3A-202ENST00000375299 ST3GAL5Q9UNP4 418 aa20.77■□□□□ 0.91
UPF3A-202ENST00000375299 TPRKBQ9Y3C4 175 aa20.77■□□□□ 0.91
UPF3A-202ENST00000375299 TTC34A8MYJ7 566 aa20.76■□□□□ 0.91
UPF3A-202ENST00000375299 RETP07949 1114 aa20.76■□□□□ 0.91
UPF3A-202ENST00000375299 JUNDP17535 347 aa20.76■□□□□ 0.91
UPF3A-202ENST00000375299 FMO3P31513 532 aa20.76■□□□□ 0.91
UPF3A-202ENST00000375299 NRIP1P48552 1158 aa20.76■□□□□ 0.91
UPF3A-202ENST00000375299 CDKN1CP49918 316 aaPredicted RBP20.76■□□□□ 0.91
UPF3A-202ENST00000375299 CPT1AP50416 773 aa20.76■□□□□ 0.91
UPF3A-202ENST00000375299 SLC35A2P78381 396 aa20.76■□□□□ 0.91
UPF3A-202ENST00000375299 MAPK11Q15759 364 aa20.76■□□□□ 0.91
UPF3A-202ENST00000375299 MAPKAPK3Q16644 382 aa20.76■□□□□ 0.91
UPF3A-202ENST00000375299 CD300LGQ6UXG3 332 aa20.76■□□□□ 0.91
UPF3A-202ENST00000375299 GOLGA7Q7Z5G4 137 aa20.76■□□□□ 0.91
UPF3A-202ENST00000375299 SCN4BQ8IWT1 228 aa20.76■□□□□ 0.91
UPF3A-202ENST00000375299 MSRB3Q8IXL7 192 aa20.76■□□□□ 0.91
UPF3A-202ENST00000375299 OR4F6Q8NGB9 312 aa20.76■□□□□ 0.91
UPF3A-202ENST00000375299 ASPSCR1Q9BZE9 553 aa20.76■□□□□ 0.91
UPF3A-202ENST00000375299 DUSP21Q9H596 190 aa20.76■□□□□ 0.91
UPF3A-202ENST00000375299 POLE4Q9NR33 117 aa20.76■□□□□ 0.91
UPF3A-202ENST00000375299 SLC25A37Q9NYZ2 338 aa20.76■□□□□ 0.91
UPF3A-202ENST00000375299 U3KQV3 271 aa20.76■□□□□ 0.91
UPF3A-202ENST00000375299 M0QZQ0 153 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 PRAMEF11O60813 436 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 EIF2S1P05198 315 aaKnown RBP20.75■□□□□ 0.91
UPF3A-202ENST00000375299 CNPP09543 421 aaKnown RBP20.75■□□□□ 0.91
UPF3A-202ENST00000375299 CD40LGP29965 261 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 NCS1P62166 190 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 RPL38P63173 70 aaKnown RBP20.75■□□□□ 0.91
UPF3A-202ENST00000375299 SELENBP1Q13228 472 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 ABRAXAS2Q15018 415 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 CTSL3PQ5NE16 218 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 PPP3R2Q96LZ3 170 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 SH3GL1Q99961 368 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 INVSQ9Y283 1065 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 OR7A17O14581 309 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 CREG1O75629 220 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 SEC24AO95486 1093 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 ZNF24P17028 368 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 PSMB9P28065 219 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 MASP1P48740 699 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 TPTEP56180 551 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 VAC14Q08AM6 782 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 PTGR1Q14914 329 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 CLCA4Q14CN2 919 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 FAM174BQ3ZCQ3 159 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 RUNDC3AQ59EK9 446 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 DNAJC14Q6Y2X3 702 aaPredicted RBP20.75■□□□□ 0.91
UPF3A-202ENST00000375299 CCDC81Q6ZN84 652 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 PRSS48Q7RTY5 328 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 GLT6D1Q7Z4J2 308 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 TRIB2Q92519 343 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 THG1LQ9NWX6 298 aaKnown RBP20.75■□□□□ 0.91
UPF3A-202ENST00000375299 KLQ9UEF7 1012 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 VPS9D1Q9Y2B5 631 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 PCDHB14Q9Y5E9 798 aa20.75■□□□□ 0.91
UPF3A-202ENST00000375299 MITFO75030 526 aaPredicted RBP20.74■□□□□ 0.91
UPF3A-202ENST00000375299 SLC2A4P14672 509 aa20.74■□□□□ 0.91
UPF3A-202ENST00000375299 IGFBP5P24593 272 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms