RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 PWP1Q13610 501 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 ARHGEF7Q14155 803 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 FXNQ16595 210 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 MBOAT1Q6ZNC8 495 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 TBC1D21Q8IYX1 336 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 ELMOD1Q8N336 334 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 PAPD5Q8NDF8 572 aaKnown RBP28.38■■■□□ 2.13
SSBP3-204ENST00000371320 TSPAN14Q8NG11 270 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 ULK4Q96C45 1275 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 BIRC7Q96CA5 298 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 NTMT1Q9BV86 223 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 ABCG8Q9H221 673 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 RPF2Q9H7B2 306 aaKnown RBP28.38■■■□□ 2.13
SSBP3-204ENST00000371320 TRPS1Q9UHF7 1281 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 OAZ3Q9UMX2 235 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 MYRFQ9Y2G1 1151 aa28.38■■■□□ 2.13
SSBP3-204ENST00000371320 ZNF106Q9H2Y7 1883 aaKnown RBP28.37■■■□□ 2.13
SSBP3-204ENST00000371320 A0A1B0GTW7 788 aa28.37■■■□□ 2.13
SSBP3-204ENST00000371320 PLOD2O00469 737 aa28.37■■■□□ 2.13
SSBP3-204ENST00000371320 C8AP07357 584 aa28.37■■■□□ 2.13
SSBP3-204ENST00000371320 NELFEP18615 380 aaKnown RBP28.37■■■□□ 2.13
SSBP3-204ENST00000371320 ATP6AP1Q15904 470 aa28.37■■■□□ 2.13
SSBP3-204ENST00000371320 ATP13A5Q4VNC0 1218 aa28.37■■■□□ 2.13
SSBP3-204ENST00000371320 CORO1BQ9BR76 489 aa28.37■■■□□ 2.13
SSBP3-204ENST00000371320 HAUS8Q9BT25 410 aa28.37■■■□□ 2.13
SSBP3-204ENST00000371320 ZDHHC6Q9H6R6 413 aa28.37■■■□□ 2.13
SSBP3-204ENST00000371320 VCX3AQ9NNX9 186 aa28.37■■■□□ 2.13
SSBP3-204ENST00000371320 ZNF490Q9ULM2 529 aaPredicted RBP28.37■■■□□ 2.13
SSBP3-204ENST00000371320 PPIL1Q9Y3C6 166 aa28.37■■■□□ 2.13
SSBP3-204ENST00000371320 PCDHB3Q9Y5E6 796 aa28.37■■■□□ 2.13
SSBP3-204ENST00000371320 CXorf51AA0A1B0GTR3 108 aa28.36■■■□□ 2.13
SSBP3-204ENST00000371320 LOC730098B7Z3J9 87 aa28.36■■■□□ 2.13
SSBP3-204ENST00000371320 STK16O75716 305 aa28.36■■■□□ 2.13
SSBP3-204ENST00000371320 FGF18O76093 207 aa28.36■■■□□ 2.13
SSBP3-204ENST00000371320 WDR47O94967 919 aa28.36■■■□□ 2.13
SSBP3-204ENST00000371320 CTSAP10619 480 aa28.36■■■□□ 2.13
SSBP3-204ENST00000371320 SMU1Q2TAY7 513 aa28.36■■■□□ 2.13
SSBP3-204ENST00000371320 SGO1Q5FBB7 561 aa28.36■■■□□ 2.13
SSBP3-204ENST00000371320 TMTC4Q5T4D3 741 aa28.36■■■□□ 2.13
SSBP3-204ENST00000371320 RNF165Q6ZSG1 346 aa28.36■■■□□ 2.13
SSBP3-204ENST00000371320 CCDC149Q6ZUS6 474 aa28.36■■■□□ 2.13
SSBP3-204ENST00000371320 CAAP1Q9H8G2 361 aa28.36■■■□□ 2.13
SSBP3-204ENST00000371320 TLR9Q9NR96 1032 aa28.36■■■□□ 2.13
SSBP3-204ENST00000371320 OLAHQ9NV23 265 aa28.36■■■□□ 2.13
SSBP3-204ENST00000371320 VILLO15195 856 aa28.36■■■□□ 2.13
SSBP3-204ENST00000371320 ANXA5P08758 320 aa28.36■■■□□ 2.13
SSBP3-204ENST00000371320 LHCGRP22888 699 aa28.36■■■□□ 2.13
SSBP3-204ENST00000371320 MTPNP58546 118 aa28.36■■■□□ 2.13
SSBP3-204ENST00000371320 HMGCS1Q01581 520 aa28.36■■■□□ 2.13
SSBP3-204ENST00000371320 IMPG1Q17R60 797 aa28.36■■■□□ 2.13
SSBP3-204ENST00000371320 GLYATQ6IB77 296 aa28.36■■■□□ 2.13
SSBP3-204ENST00000371320 SPRED1Q7Z699 444 aa28.36■■■□□ 2.13
SSBP3-204ENST00000371320 ZNF784Q8NCA9 323 aaPredicted RBP28.36■■■□□ 2.13
SSBP3-204ENST00000371320 NMD3Q96D46 503 aaKnown RBP28.36■■■□□ 2.13
SSBP3-204ENST00000371320 KLHL42Q9P2K6 505 aa28.36■■■□□ 2.13
SSBP3-204ENST00000371320 MAGEL2Q9UJ55 1249 aa28.36■■■□□ 2.13
SSBP3-204ENST00000371320 KIAA1671Q9BY89 1806 aa28.35■■■□□ 2.13
SSBP3-204ENST00000371320 H3BNH8 94 aa28.35■■■□□ 2.13
SSBP3-204ENST00000371320 DLGAP1O14490 977 aa28.35■■■□□ 2.13
SSBP3-204ENST00000371320 GNPDA1P46926 289 aa28.35■■■□□ 2.13
SSBP3-204ENST00000371320 B4GALNT1Q00973 533 aa28.35■■■□□ 2.13
SSBP3-204ENST00000371320 SELPLGQ14242 412 aa28.35■■■□□ 2.13
SSBP3-204ENST00000371320 PTGR1Q14914 329 aa28.35■■■□□ 2.13
SSBP3-204ENST00000371320 KIAA0040Q15053 153 aa28.35■■■□□ 2.13
SSBP3-204ENST00000371320 RFLNAQ6ZTI6 216 aa28.35■■■□□ 2.13
SSBP3-204ENST00000371320 TRIM46Q7Z4K8 759 aa28.35■■■□□ 2.13
SSBP3-204ENST00000371320 FAM47BQ8NA70 645 aa28.35■■■□□ 2.13
SSBP3-204ENST00000371320 RMND5BQ96G75 393 aaPredicted RBP28.35■■■□□ 2.13
SSBP3-204ENST00000371320 NSMCE2Q96MF7 247 aa28.35■■■□□ 2.13
SSBP3-204ENST00000371320 MCCC1Q96RQ3 725 aaPredicted RBP28.35■■■□□ 2.13
SSBP3-204ENST00000371320 SEPHS2Q99611 448 aa28.35■■■□□ 2.13
SSBP3-204ENST00000371320 C8orf4Q9NR00 106 aa28.35■■■□□ 2.13
SSBP3-204ENST00000371320 SMOXQ9NWM0 555 aa28.35■■■□□ 2.13
SSBP3-204ENST00000371320 MANBAO00462 879 aa28.34■■■□□ 2.13
SSBP3-204ENST00000371320 GRM6O15303 877 aa28.34■■■□□ 2.13
SSBP3-204ENST00000371320 KCNH1O95259 989 aa28.34■■■□□ 2.13
SSBP3-204ENST00000371320 RASAL1O95294 804 aa28.34■■■□□ 2.13
SSBP3-204ENST00000371320 CLTBP09497 229 aa28.34■■■□□ 2.13
SSBP3-204ENST00000371320 CCR7P32248 378 aa28.34■■■□□ 2.13
SSBP3-204ENST00000371320 PLIN5Q00G26 463 aa28.34■■■□□ 2.13
SSBP3-204ENST00000371320 CACHD1Q5VU97 1274 aa28.34■■■□□ 2.13
SSBP3-204ENST00000371320 C1orf53Q5VUE5 145 aa28.34■■■□□ 2.13
SSBP3-204ENST00000371320 CPEB1Q9BZB8 566 aaKnown RBP28.34■■■□□ 2.13
SSBP3-204ENST00000371320 ASAH2Q9NR71 780 aa28.34■■■□□ 2.13
SSBP3-204ENST00000371320 ARL15Q9NXU5 204 aa28.34■■■□□ 2.13
SSBP3-204ENST00000371320 SLC25A13Q9UJS0 675 aa28.34■■■□□ 2.13
SSBP3-204ENST00000371320 CCDC160A6NGH7 325 aa28.34■■■□□ 2.13
SSBP3-204ENST00000371320 ACOX3O15254 700 aa28.34■■■□□ 2.13
SSBP3-204ENST00000371320 POP4O95707 220 aaKnown RBP28.34■■■□□ 2.13
SSBP3-204ENST00000371320 UGT2B4P06133 528 aa28.34■■■□□ 2.13
SSBP3-204ENST00000371320 RPIAP49247 311 aa28.34■■■□□ 2.13
SSBP3-204ENST00000371320 CARD16Q5EG05 197 aa28.34■■■□□ 2.13
SSBP3-204ENST00000371320 LILRA6Q6PI73 481 aa28.34■■■□□ 2.13
SSBP3-204ENST00000371320 DPY19L3Q6ZPD9 716 aa28.34■■■□□ 2.13
SSBP3-204ENST00000371320 SLC13A3Q8WWT9 602 aa28.34■■■□□ 2.13
SSBP3-204ENST00000371320 LRTM1Q9HBL6 345 aa28.34■■■□□ 2.13
SSBP3-204ENST00000371320 ZFP14Q9HCL3 533 aa28.34■■■□□ 2.13
SSBP3-204ENST00000371320 V9GYQ6 96 aa28.34■■■□□ 2.13
SSBP3-204ENST00000371320 SEC22BO75396 215 aa28.33■■■□□ 2.13
SSBP3-204ENST00000371320 OR56A5P0C7T3 313 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms