RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 TSTD2Q5T7W7 516 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 PLA2G15Q8NCC3 412 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 GIPC3Q8TF64 312 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 INPP4AQ96PE3 977 aaPredicted RBP15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 NIFKQ9BYG3 293 aaKnown RBP15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 LDAHQ9H6V9 325 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 SDHAF3Q9NRP4 125 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 NR2E1Q9Y466 385 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 FAM172BPA6NC97 362 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 OR1I1O60431 355 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 S100A6P06703 90 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 GSTT2BP0CG30 244 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 PLA2G16P53816 162 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 GDF6Q6KF10 455 aaPredicted RBP15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 MPP5Q8N3R9 675 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 ZSCAN4Q8NAM6 433 aaPredicted RBP15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 TNFAIP8L1Q8WVP5 186 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 PCED1BQ96HM7 432 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 CPXM1Q96SM3 734 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 ZNF282Q9UDV7 671 aaPredicted RBP15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 FAM240BA0A1B0GVZ2 78 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 NR2C1P13056 603 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 PGAM2P15259 253 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 GDI1P31150 447 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 CCR8P51685 355 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 CBX3Q13185 183 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 TOR1AIP1Q5JTV8 583 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 PNLDC1Q8NA58 520 aaKnown RBP15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 CEP295NLQ96MC4 621 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 PSKH2Q96QS6 385 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 CHRAC1Q9NRG0 131 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 BCORL1Q5H9F3 1711 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 EPHB6O15197 1021 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 CRISP3P54108 245 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 SP140Q13342 867 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 RFTN1Q14699 578 aaPredicted RBP15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 CCSAPQ6IQ19 270 aaPredicted RBP15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 NKD1Q969G9 470 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 DIRAS2Q96HU8 199 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 AGAP2Q99490 1192 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 DNAAF2Q9NVR5 837 aaKnown RBP15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 FKBPLQ9UIM3 349 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 ARCN1P48444 511 aaKnown RBP15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 CAPZA1P52907 286 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 CDH12P55289 794 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 SMARCD3Q6STE5 483 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 RBM44Q6ZP01 1051 aaKnown RBP15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 ZZZ3Q8IYH5 903 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 OR10H4Q8NGA5 316 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 C11orf16Q9NQ32 467 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 RUVBL1Q9Y265 456 aaKnown RBP15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 DIP2CQ9Y2E4 1556 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 CA12O43570 354 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 KLK3P07288 261 aaPredicted RBP15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 SMPD1P17405 629 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 MPIP34949 423 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 RPS9P46781 194 aaKnown RBP15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 SIM2Q14190 667 aaPredicted RBP15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 IFI44LQ53G44 452 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 REP15Q6BDI9 236 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 TATDN1Q6P1N9 297 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 ZSCAN1Q8NBB4 408 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 SLC25A36Q96CQ1 311 aa15.47■□□□□ 0.07
NUCKS1-201ENST00000367142 DUXAA6NLW8 204 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 COL6A1P12109 1028 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 GSTT1P30711 240 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 MPP1Q00013 466 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 ELOAQ14241 798 aaKnown RBP15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 LAPTM4BQ86VI4 370 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 GKN2Q86XP6 184 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 PWWP2AQ96N64 755 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 NDC1Q9BTX1 674 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 TRMT61BQ9BVS5 477 aaKnown RBP15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 POLR3BQ9NW08 1133 aaPredicted RBP15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 THUMPD1Q9NXG2 353 aaKnown RBP15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 CFL2Q9Y281 166 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 SRRM3A6NNA2 597 aaPredicted RBP15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 ENTPD5O75356 428 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 RB1P06400 928 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 GHRHRQ02643 423 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 UAP1L1Q3KQV9 507 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 PLET1Q6UQ28 207 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 MREGQ8N565 214 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 FAM13CQ8NE31 585 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 ACDQ96AP0 544 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 DGCR14Q96DF8 476 aaKnown RBP15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 MIPEPQ99797 713 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 FUCA2Q9BTY2 467 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 STXBP5LQ9Y2K9 1186 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 PLLPQ9Y342 182 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 FADS3Q9Y5Q0 445 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 AGLP35573 1532 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 GNAZP19086 355 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 HSD11B1P28845 292 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 ADAM8P78325 824 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 MBOAT1Q6ZNC8 495 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 DGLUCYQ7Z3D6 616 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 ARMC10Q8N2F6 343 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 SH3RF2Q8TEC5 729 aa15.46■□□□□ 0.07
NUCKS1-201ENST00000367142 SLC44A1Q8WWI5 657 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms