RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 CREB5Q02930 508 aa4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 ITGA9Q13797 1035 aa4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 DUSP28Q4G0W2 176 aa4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 GRTP1Q5TC63 336 aa4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 FIGLAQ6QHK4 219 aa4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 SZRD1Q7Z422 152 aa4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 ZNF554Q86TJ5 538 aa4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 LDB1Q86U70 411 aaPredicted RBP4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 MCEMP1Q8IX19 187 aa4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 FBXO39Q8N4B4 442 aa4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 CPSF7Q8N684 471 aaKnown RBP4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 OR5M8Q8NGP6 311 aa4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 GRHL3Q8TE85 626 aa4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 RNF128Q8TEB7 428 aa4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 MTERF3Q96E29 417 aa4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 CDRT15Q96T59 188 aa4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 SDF4Q9BRK5 362 aa4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 KCNK15Q9H427 330 aa4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 INTS9Q9NV88 658 aaKnown RBP4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 RASAL2Q9UJF2 1139 aa4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 ZHX1Q9UKY1 873 aaPredicted RBP4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 PTRH2Q9Y3E5 179 aaKnown RBP4.05□□□□□ -1.76
RNU4-28P-201ENST00000364739 RSF1Q96T23 1441 aaPredicted RBP4.04□□□□□ -1.76
RNU4-28P-201ENST00000364739 ITIH6Q6UXX5 1313 aa4.04□□□□□ -1.76
RNU4-28P-201ENST00000364739 EXTL3O43909 919 aa4.04□□□□□ -1.76
RNU4-28P-201ENST00000364739 PSMB10P40306 273 aa4.04□□□□□ -1.76
RNU4-28P-201ENST00000364739 WNT5AP41221 380 aa4.04□□□□□ -1.76
RNU4-28P-201ENST00000364739 CLK1P49759 484 aaKnown RBP4.04□□□□□ -1.76
RNU4-28P-201ENST00000364739 B3GALT5-AS1P59052 145 aa4.04□□□□□ -1.76
RNU4-28P-201ENST00000364739 IRX1P78414 480 aaPredicted RBP4.04□□□□□ -1.76
RNU4-28P-201ENST00000364739 KCNJ10P78508 379 aa4.04□□□□□ -1.76
RNU4-28P-201ENST00000364739 CXCL9Q07325 125 aa4.04□□□□□ -1.76
RNU4-28P-201ENST00000364739 RRS1Q15050 365 aaKnown RBP4.04□□□□□ -1.76
RNU4-28P-201ENST00000364739 P2RY6Q15077 328 aa4.04□□□□□ -1.76
RNU4-28P-201ENST00000364739 PHLDA2Q53GA4 152 aa4.04□□□□□ -1.76
RNU4-28P-201ENST00000364739 MDH1BQ5I0G3 518 aa4.04□□□□□ -1.76
RNU4-28P-201ENST00000364739 FAM205BPQ63HN1 556 aa4.04□□□□□ -1.76
RNU4-28P-201ENST00000364739 C4orf50Q6ZRC1 276 aa4.04□□□□□ -1.76
RNU4-28P-201ENST00000364739 KBTBD6Q86V97 674 aa4.04□□□□□ -1.76
RNU4-28P-201ENST00000364739 TAF15Q92804 592 aaKnown RBP eCLIP4.04□□□□□ -1.76
RNU4-28P-201ENST00000364739 FAM120BQ96EK7 910 aaKnown RBP4.04□□□□□ -1.76
RNU4-28P-201ENST00000364739 FNDC11Q9BVV2 318 aa4.04□□□□□ -1.76
RNU4-28P-201ENST00000364739 MAK16Q9BXY0 300 aaKnown RBP4.04□□□□□ -1.76
RNU4-28P-201ENST00000364739 S1PR5Q9H228 398 aa4.04□□□□□ -1.76
RNU4-28P-201ENST00000364739 DPAGT1Q9H3H5 408 aa4.04□□□□□ -1.76
RNU4-28P-201ENST00000364739 SYNCQ9H7C4 482 aa4.04□□□□□ -1.76
RNU4-28P-201ENST00000364739 WSB2Q9NYS7 404 aaPredicted RBP4.04□□□□□ -1.76
RNU4-28P-201ENST00000364739 TMEM181Q9P2C4 612 aa4.04□□□□□ -1.76
RNU4-28P-201ENST00000364739 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.03□□□□□ -1.76
RNU4-28P-201ENST00000364739 SH2B2O14492 632 aaPredicted RBP4.03□□□□□ -1.76
RNU4-28P-201ENST00000364739 ADAMDEC1O15204 470 aa4.03□□□□□ -1.76
RNU4-28P-201ENST00000364739 ZNF500O60304 480 aaPredicted RBP4.03□□□□□ -1.76
RNU4-28P-201ENST00000364739 WDHD1O75717 1129 aaPredicted RBP4.03□□□□□ -1.76
RNU4-28P-201ENST00000364739 EML2O95834 649 aa4.03□□□□□ -1.76
RNU4-28P-201ENST00000364739 BCL10O95999 233 aa4.03□□□□□ -1.76
RNU4-28P-201ENST00000364739 TPOP07202 933 aa4.03□□□□□ -1.76
RNU4-28P-201ENST00000364739 HOXD13P35453 343 aa4.03□□□□□ -1.76
RNU4-28P-201ENST00000364739 TAF6P49848 677 aa4.03□□□□□ -1.76
RNU4-28P-201ENST00000364739 TPD52P55327 224 aaPredicted RBP4.03□□□□□ -1.76
RNU4-28P-201ENST00000364739 AIMP2Q13155 320 aaKnown RBP4.03□□□□□ -1.76
RNU4-28P-201ENST00000364739 SIM2Q14190 667 aaPredicted RBP4.03□□□□□ -1.76
RNU4-28P-201ENST00000364739 ADAMTSL4-AS1Q5T5F5 129 aa4.03□□□□□ -1.76
RNU4-28P-201ENST00000364739 TEX38Q6PEX7 206 aa4.03□□□□□ -1.76
RNU4-28P-201ENST00000364739 HAUS6Q7Z4H7 955 aa4.03□□□□□ -1.76
RNU4-28P-201ENST00000364739 OR13J1Q8NGT2 312 aa4.03□□□□□ -1.76
RNU4-28P-201ENST00000364739 OR2T6Q8NHC8 308 aa4.03□□□□□ -1.76
RNU4-28P-201ENST00000364739 GIMAP5Q96F15 307 aa4.03□□□□□ -1.76
RNU4-28P-201ENST00000364739 NSL1Q96IY1 281 aa4.03□□□□□ -1.76
RNU4-28P-201ENST00000364739 SGK494Q96LW2 274 aa4.03□□□□□ -1.76
RNU4-28P-201ENST00000364739 VN1R1Q9GZP7 353 aa4.03□□□□□ -1.76
RNU4-28P-201ENST00000364739 WDR13Q9H1Z4 485 aa4.03□□□□□ -1.76
RNU4-28P-201ENST00000364739 ADD3Q9UEY8 706 aaKnown RBP4.03□□□□□ -1.76
RNU4-28P-201ENST00000364739 LAS1LQ9Y4W2 734 aaKnown RBP4.03□□□□□ -1.76
RNU4-28P-201ENST00000364739 IGHV4-61A0A0C4DH41 118 aa4.02□□□□□ -1.77
RNU4-28P-201ENST00000364739 HYKKA2RU49 373 aa4.02□□□□□ -1.77
RNU4-28P-201ENST00000364739 PIGNO95427 931 aa4.02□□□□□ -1.77
RNU4-28P-201ENST00000364739 IGHV4-59P01825 116 aa4.02□□□□□ -1.77
RNU4-28P-201ENST00000364739 RNF224P0DH78 156 aa4.02□□□□□ -1.77
RNU4-28P-201ENST00000364739 CDR2Q01850 454 aa4.02□□□□□ -1.77
RNU4-28P-201ENST00000364739 TUBB2AQ13885 445 aa4.02□□□□□ -1.77
RNU4-28P-201ENST00000364739 PWWP2BQ6NUJ5 590 aa4.02□□□□□ -1.77
RNU4-28P-201ENST00000364739 TMCO3Q6UWJ1 677 aa4.02□□□□□ -1.77
RNU4-28P-201ENST00000364739 SCML4Q8N228 414 aa4.02□□□□□ -1.77
RNU4-28P-201ENST00000364739 MAPKAPK5-AS1Q8N8E1 139 aa4.02□□□□□ -1.77
RNU4-28P-201ENST00000364739 POC5Q8NA72 575 aa4.02□□□□□ -1.77
RNU4-28P-201ENST00000364739 TMEM178AQ8NBL3 297 aa4.02□□□□□ -1.77
RNU4-28P-201ENST00000364739 OR4C3Q8NH37 302 aa4.02□□□□□ -1.77
RNU4-28P-201ENST00000364739 FGFBP3Q8TAT2 258 aa4.02□□□□□ -1.77
RNU4-28P-201ENST00000364739 GMPPAQ96IJ6 420 aaPredicted RBP4.02□□□□□ -1.77
RNU4-28P-201ENST00000364739 OLFM1Q99784 485 aa4.02□□□□□ -1.77
RNU4-28P-201ENST00000364739 TUBB2BQ9BVA1 445 aa4.02□□□□□ -1.77
RNU4-28P-201ENST00000364739 SPATC1LQ9H0A9 340 aa4.02□□□□□ -1.77
RNU4-28P-201ENST00000364739 TBC1D17Q9HA65 648 aa4.02□□□□□ -1.77
RNU4-28P-201ENST00000364739 PLCXD1Q9NUJ7 323 aa4.02□□□□□ -1.77
RNU4-28P-201ENST00000364739 ATAD3AQ9NVI7 634 aa4.02□□□□□ -1.77
RNU4-28P-201ENST00000364739 TBC1D29Q9UFV1 150 aa4.02□□□□□ -1.77
RNU4-28P-201ENST00000364739 TUBE1Q9UJT0 475 aa4.02□□□□□ -1.77
RNU4-28P-201ENST00000364739 ZNF148Q9UQR1 794 aa4.02□□□□□ -1.77
RNU4-28P-201ENST00000364739 MEIOCA2RUB1 952 aa4.01□□□□□ -1.77
RNU4-28P-201ENST00000364739 ERI2A8K979 691 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 213.6 ms