RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 MAVSQ7Z434 540 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 GLT6D1Q7Z4J2 308 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 SDCCAG8Q86SQ7 713 aaPredicted RBP8.1□□□□□ -1.11
CD44-205ENST00000352818 TTC7BQ86TV6 843 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 SLC22A9Q8IVM8 553 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 MFN1Q8IWA4 741 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 TTC30BQ8N4P2 665 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 ZNF557Q8N988 423 aaPredicted RBP8.1□□□□□ -1.11
CD44-205ENST00000352818 OR13C4Q8NGS5 318 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 OR6P1Q8NGX9 317 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 CFAP61Q8NHU2 1237 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 FIBINQ8TAL6 211 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 HEXDCQ8WVB3 486 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 UTP4Q969X6 686 aaKnown RBP8.1□□□□□ -1.11
CD44-205ENST00000352818 NXNL1Q96CM4 212 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 CCDC97Q96F63 343 aaPredicted RBP8.1□□□□□ -1.11
CD44-205ENST00000352818 SIPA1Q96FS4 1042 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 CDKN2AIPNLQ96HQ2 116 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 CNDP1Q96KN2 507 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 TBATAQ96M53 351 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 NSMCE3Q96MG7 304 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 DEPDC7Q96QD5 511 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 BTBD10Q9BSF8 475 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 AARSD1Q9BTE6 412 aaKnown RBP8.1□□□□□ -1.11
CD44-205ENST00000352818 TRMOQ9BU70 441 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 CCDC106Q9BWC9 280 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 TBC1D10AQ9BXI6 508 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 ILKAPQ9H0C8 392 aaPredicted RBP8.1□□□□□ -1.11
CD44-205ENST00000352818 C1orf21Q9H246 121 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 GPAMQ9HCL2 828 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 MARCH4Q9P2E8 410 aaPredicted RBP8.1□□□□□ -1.11
CD44-205ENST00000352818 VTI1BQ9UEU0 232 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 MARCOQ9UEW3 520 aaPredicted RBP8.1□□□□□ -1.11
CD44-205ENST00000352818 TAGLN3Q9UI15 199 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 ANAPC2Q9UJX6 822 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 VPS28Q9UK41 221 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 TRIM33Q9UPN9 1127 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 SH3BP1Q9Y3L3 701 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 KCTD3Q9Y597 815 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 PCDHGA8Q9Y5G5 932 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 PCDHGA4Q9Y5G9 962 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 SPO11Q9Y5K1 396 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 ACTL7AQ9Y615 435 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 COMMD10Q9Y6G5 202 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 LY6G6EA0A0G2JKS1 128 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 A0A1W2PR77 199 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 ANKRD66B4E2M5 251 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 C10orf142B7Z368 130 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 MATN2O00339 956 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 SLC9A3R1O14745 358 aaPredicted RBP8.09□□□□□ -1.11
CD44-205ENST00000352818 CASC3O15234 703 aaKnown RBP8.09□□□□□ -1.11
CD44-205ENST00000352818 HDAC3O15379 428 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 HTRA2O43464 458 aaPredicted RBP8.09□□□□□ -1.11
CD44-205ENST00000352818 SOCS5O75159 536 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 CISD3P0C7P0 127 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 C7P10643 843 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 KITP10721 976 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 SAT1P21673 171 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 RBMS1P29558 406 aaKnown RBP8.09□□□□□ -1.11
CD44-205ENST00000352818 ADARP55265 1226 aaKnown RBP8.09□□□□□ -1.11
CD44-205ENST00000352818 NAA20P61599 178 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 RACK1P63244 317 aaKnown RBP8.09□□□□□ -1.11
CD44-205ENST00000352818 TRAF2Q12933 501 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 SEMA3AQ14563 771 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 ZNF460Q14592 562 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 FSCBQ5H9T9 825 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 SH2D4BQ5SQS7 431 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 WASHC2DQ5SRD0 308 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 GRAMD4Q6IC98 578 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 SDE2Q6IQ49 451 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 ZNF549Q6P9A3 640 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 MMP21Q8N119 569 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 ARHGAP24Q8N264 748 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 KIF2BQ8N4N8 673 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 ZNF781Q8N8C0 355 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 LPCAT1Q8NF37 534 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 RHEBL1Q8TAI7 183 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 WFDC5Q8TCV5 224 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 LPGAT1Q92604 370 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 L3HYPDHQ96EM0 354 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 MYO19Q96H55 970 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 FAR2Q96K12 515 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 LMLNQ96KR4 655 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 NDNQ99608 321 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 EBF4Q9BQW3 602 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 CCDC28BQ9BUN5 200 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 MAGEE1Q9HCI5 957 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 ABCB8Q9NUT2 735 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 MRGBPQ9NV56 204 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 PNPOQ9NVS9 261 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 NCKIPSDQ9NZQ3 722 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 CPSF2Q9P2I0 782 aaKnown RBP8.09□□□□□ -1.11
CD44-205ENST00000352818 U3KQA8 63 aa8.09□□□□□ -1.11
CD44-205ENST00000352818 LRRK1Q38SD2 2015 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 OR51F1A6NGY5 319 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 CHUKO15111 745 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 MAGEC1O60732 1142 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 IPO13O94829 963 aaKnown RBP8.08□□□□□ -1.12
CD44-205ENST00000352818 PGLSO95336 258 aa8.08□□□□□ -1.12
CD44-205ENST00000352818 CYBBP04839 570 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms