RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 GLB1L3Q8NCI6 653 aaPredicted RBP21.71■■□□□ 1.07
UPF3A-201ENST00000351487 TMIGD2Q96BF3 282 aa21.71■■□□□ 1.07
UPF3A-201ENST00000351487 DTNBP1Q96EV8 351 aa21.71■■□□□ 1.07
UPF3A-201ENST00000351487 ZBTB18Q99592 522 aa21.71■■□□□ 1.07
UPF3A-201ENST00000351487 SEPHS2Q99611 448 aa21.71■■□□□ 1.07
UPF3A-201ENST00000351487 PIF1Q9H611 641 aa21.71■■□□□ 1.07
UPF3A-201ENST00000351487 KIAA1522Q9P206 1035 aaPredicted RBP21.71■■□□□ 1.07
UPF3A-201ENST00000351487 KLHL42Q9P2K6 505 aa21.71■■□□□ 1.07
UPF3A-201ENST00000351487 MAFFQ9ULX9 164 aa21.71■■□□□ 1.07
UPF3A-201ENST00000351487 PRSS23O95084 383 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 CBSLP0DN79 551 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 PCSK6P29122 969 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 CBSP35520 551 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 CDH15P55291 814 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 AAK1Q2M2I8 961 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 HTR3DQ70Z44 454 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 DHRSXQ8N5I4 330 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 PAF1Q8N7H5 531 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 LEMD2Q8NC56 503 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 CYGBQ8WWM9 190 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 USP7Q93009 1102 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 VOPP1Q96AW1 172 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 RNF145Q96MT1 663 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 MRPL17Q9NRX2 175 aaKnown RBP21.7■■□□□ 1.06
UPF3A-201ENST00000351487 FADS3Q9Y5Q0 445 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 NPIPB15A6NHN6 443 aaPredicted RBP21.7■■□□□ 1.06
UPF3A-201ENST00000351487 ANXA6P08133 673 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 PTGR1Q14914 329 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 PLEKHG6Q3KR16 790 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 MPPE1Q53F39 396 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 USP51Q70EK9 711 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 PATL1Q86TB9 770 aaKnown RBP21.7■■□□□ 1.06
UPF3A-201ENST00000351487 OR2AP1Q8NGE2 309 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 FIBINQ8TAL6 211 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 ZNF583Q96ND8 569 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 SLC29A3Q9BZD2 475 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 TNKS2Q9H2K2 1166 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 VAPAQ9P0L0 249 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 CLEC4EQ9ULY5 219 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 ZNF510Q9Y2H8 683 aa21.7■■□□□ 1.06
UPF3A-201ENST00000351487 CXorf51AA0A1B0GTR3 108 aa21.69■■□□□ 1.06
UPF3A-201ENST00000351487 FFAR3O14843 346 aa21.69■■□□□ 1.06
UPF3A-201ENST00000351487 CLOCKO15516 846 aa21.69■■□□□ 1.06
UPF3A-201ENST00000351487 GPR42O15529 346 aa21.69■■□□□ 1.06
UPF3A-201ENST00000351487 ULK1O75385 1050 aa21.69■■□□□ 1.06
UPF3A-201ENST00000351487 TRMUO75648 421 aaKnown RBP21.69■■□□□ 1.06
UPF3A-201ENST00000351487 AKT1P31749 480 aa21.69■■□□□ 1.06
UPF3A-201ENST00000351487 NSG1P42857 185 aa21.69■■□□□ 1.06
UPF3A-201ENST00000351487 GNPDA1P46926 289 aa21.69■■□□□ 1.06
UPF3A-201ENST00000351487 PIK3CGP48736 1102 aa21.69■■□□□ 1.06
UPF3A-201ENST00000351487 DGKKQ5KSL6 1271 aa21.69■■□□□ 1.06
UPF3A-201ENST00000351487 CDKL4Q5MAI5 379 aa21.69■■□□□ 1.06
UPF3A-201ENST00000351487 TSPAN33Q86UF1 283 aa21.69■■□□□ 1.06
UPF3A-201ENST00000351487 NUDT8Q8WV74 236 aa21.69■■□□□ 1.06
UPF3A-201ENST00000351487 GTF2H4Q92759 462 aa21.69■■□□□ 1.06
UPF3A-201ENST00000351487 FBXL20Q96IG2 436 aa21.69■■□□□ 1.06
UPF3A-201ENST00000351487 FARSBQ9NSD9 589 aaKnown RBP21.69■■□□□ 1.06
UPF3A-201ENST00000351487 KCTD5Q9NXV2 234 aa21.69■■□□□ 1.06
UPF3A-201ENST00000351487 KLQ9UEF7 1012 aa21.69■■□□□ 1.06
UPF3A-201ENST00000351487 MT-ND1P03886 318 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 RAP2AP10114 183 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 EPB42P16452 691 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 TTC23LQ6PF05 361 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 ABRAXAS1Q6UWZ7 409 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 ANKRD33Q7Z3H0 272 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 BBS7Q8IWZ6 715 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 ADGRG2Q8IZP9 1017 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 GPR26Q8NDV2 337 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 ITFG1Q8TB96 612 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 VPS50Q96JG6 964 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 GORASP2Q9H8Y8 452 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 NTN4Q9HB63 628 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 INTS6Q9UL03 887 aaKnown RBP21.68■■□□□ 1.06
UPF3A-201ENST00000351487 V9GYQ6 96 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 UPK1AO00322 258 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 MANBAO00462 879 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 DFNA5O60443 496 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 DEAF1O75398 565 aaPredicted RBP21.68■■□□□ 1.06
UPF3A-201ENST00000351487 ARHGEF15O94989 841 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 IL6P05231 212 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 RPL10P27635 214 aaKnown RBP21.68■■□□□ 1.06
UPF3A-201ENST00000351487 CD70P32970 193 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 ADARB1P78563 741 aaKnown RBP21.68■■□□□ 1.06
UPF3A-201ENST00000351487 SLC7A9P82251 487 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 FAM174BQ3ZCQ3 159 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 CACHD1Q5VU97 1274 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 CRTC1Q6UUV9 634 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 LPCAT2Q7L5N7 544 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 DDX53Q86TM3 631 aaKnown RBP21.68■■□□□ 1.06
UPF3A-201ENST00000351487 MAGEE2Q8TD90 523 aaPredicted RBP21.68■■□□□ 1.06
UPF3A-201ENST00000351487 ZNF689Q96CS4 500 aaPredicted RBP21.68■■□□□ 1.06
UPF3A-201ENST00000351487 ECHDC3Q96DC8 303 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 DPY30Q9C005 99 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 CLMPQ9H6B4 373 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 LRTM1Q9HBL6 345 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 ZNF490Q9ULM2 529 aaPredicted RBP21.68■■□□□ 1.06
UPF3A-201ENST00000351487 PPIL1Q9Y3C6 166 aa21.68■■□□□ 1.06
UPF3A-201ENST00000351487 LTBP2Q14767 1821 aa21.67■■□□□ 1.06
UPF3A-201ENST00000351487 LOC730098B7Z3J9 87 aa21.67■■□□□ 1.06
UPF3A-201ENST00000351487 H0YAE9 185 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms