RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 C6orf89Q6UWU4 347 aa14.37□□□□□ -0.11
CBX3-201ENST00000337620 FAM83HQ6ZRV2 1179 aaPredicted RBP14.37□□□□□ -0.11
CBX3-201ENST00000337620 CHST15Q7LFX5 561 aaPredicted RBP14.37□□□□□ -0.11
CBX3-201ENST00000337620 DENND6BQ8NEG7 585 aa14.37□□□□□ -0.11
CBX3-201ENST00000337620 CLDN23Q96B33 292 aa14.37□□□□□ -0.11
CBX3-201ENST00000337620 RHBDF1Q96CC6 855 aa14.37□□□□□ -0.11
CBX3-201ENST00000337620 RILPQ96NA2 401 aa14.37□□□□□ -0.11
CBX3-201ENST00000337620 EBF4Q9BQW3 602 aa14.37□□□□□ -0.11
CBX3-201ENST00000337620 SIKE1Q9BRV8 207 aa14.37□□□□□ -0.11
CBX3-201ENST00000337620 EBF2Q9HAK2 575 aa14.37□□□□□ -0.11
CBX3-201ENST00000337620 TNFRSF12AQ9NP84 129 aa14.37□□□□□ -0.11
CBX3-201ENST00000337620 CD320Q9NPF0 282 aa14.37□□□□□ -0.11
CBX3-201ENST00000337620 MRPL40Q9NQ50 206 aaKnown RBP14.37□□□□□ -0.11
CBX3-201ENST00000337620 HAO1Q9UJM8 370 aa14.37□□□□□ -0.11
CBX3-201ENST00000337620 PTBP2Q9UKA9 531 aaKnown RBP14.37□□□□□ -0.11
CBX3-201ENST00000337620 PCTPQ9UKL6 214 aa14.37□□□□□ -0.11
CBX3-201ENST00000337620 TNPO3Q9Y5L0 923 aaKnown RBP14.37□□□□□ -0.11
CBX3-201ENST00000337620 LATO43561 262 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 APBB3O95704 486 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 AKT2P31751 481 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 PLOD1Q02809 727 aaPredicted RBP14.36□□□□□ -0.11
CBX3-201ENST00000337620 MTAPQ13126 283 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 KIAA0895LQ68EN5 471 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 MAVSQ7Z434 540 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 SPATS2Q86XZ4 545 aaKnown RBP14.36□□□□□ -0.11
CBX3-201ENST00000337620 BMFQ96LC9 184 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 PPP1R36Q96LQ0 422 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 ASB2Q96Q27 587 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 HGH1Q9BTY7 390 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 C1QTNF3Q9BXJ4 246 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 MID1IP1Q9NPA3 183 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 ABCF3Q9NUQ8 709 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 HEY2Q9UBP5 337 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 KRT87PA6NCN2 255 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 CCT8L1PA6NM43 557 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 MATN2O00339 956 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 E2F3O00716 465 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 ZNF195O14628 629 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 CCNT2O60583 730 aaKnown RBP14.36□□□□□ -0.11
CBX3-201ENST00000337620 DIAPH2O60879 1101 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 PSIP1O75475 530 aaKnown RBP14.36□□□□□ -0.11
CBX3-201ENST00000337620 IGHV4-34P06331 123 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 GDF5P43026 501 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 SH3BP2P78314 561 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 LCP2Q13094 533 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 PCBP2Q15366 365 aaKnown RBP eCLIP14.36□□□□□ -0.11
CBX3-201ENST00000337620 RBBP7Q16576 425 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 XKR5Q6UX68 686 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 TRPM8Q7Z2W7 1104 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 ZNF483Q8TF39 744 aaPredicted RBP14.36□□□□□ -0.11
CBX3-201ENST00000337620 WWP1Q9H0M0 922 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 ZBTB26Q9HCK0 441 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 SUFUQ9UMX1 484 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 SLC17A4Q9Y2C5 497 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 GPSM3Q9Y4H4 160 aa14.36□□□□□ -0.11
CBX3-201ENST00000337620 DNMT3AQ9Y6K1 912 aaPredicted RBP14.36□□□□□ -0.11
CBX3-201ENST00000337620 IGHV1OR15-9A0A0B4J2B8 117 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 ARHGEF33A8MVX0 844 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 HDAC3O15379 428 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 CATP04040 527 aaKnown RBP14.35□□□□□ -0.11
CBX3-201ENST00000337620 ACP5P13686 325 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 IDH3AP50213 366 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 CCR5P51681 352 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 NAA20P61599 178 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 ENPP7Q6UWV6 458 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 MTDHQ86UE4 582 aaKnown RBP14.35□□□□□ -0.11
CBX3-201ENST00000337620 GALNT13Q8IUC8 556 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 SNX19Q92543 992 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 BIRC7Q96CA5 298 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 TMEM79Q9BSE2 394 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 NUF2Q9BZD4 464 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 CD244Q9BZW8 370 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 DPEP2Q9H4A9 486 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 KLC4Q9NSK0 619 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 VTI1BQ9UEU0 232 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 CIDEBQ9UHD4 219 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 PSMD13Q9UNM6 376 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 INVSQ9Y283 1065 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 TRAF6Q9Y4K3 522 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 SLCO1B7G3V0H7 640 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 SCAMP1O15126 338 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 DCTN3O75935 186 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 ALOX15P16050 662 aaPredicted RBP14.35□□□□□ -0.11
CBX3-201ENST00000337620 SERPINB3P29508 390 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 MAPK9P45984 424 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 BDKRB1P46663 353 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 RPS9P46781 194 aaKnown RBP14.35□□□□□ -0.11
CBX3-201ENST00000337620 GNPDA1P46926 289 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 HK2P52789 917 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 CDKL1Q00532 357 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 PDCD2Q16342 344 aaPredicted RBP14.35□□□□□ -0.11
CBX3-201ENST00000337620 CLEC6AQ6EIG7 209 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 GCNT7Q6ZNI0 430 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 AFAP1L2Q8N4X5 818 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 OXR1Q8N573 874 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 FITM2Q8N6M3 262 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 TEX9Q8N6V9 391 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 SPDYE1Q8NFV5 336 aaPredicted RBP14.35□□□□□ -0.11
CBX3-201ENST00000337620 OR56A4Q8NGH8 313 aa14.35□□□□□ -0.11
CBX3-201ENST00000337620 MAPK15Q8TD08 544 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms