RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 SCGB3A2Q96PL1 93 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 PSKH2Q96QS6 385 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 HIST1H2AAQ96QV6 131 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 ACBD6Q9BR61 282 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 CHIAQ9BZP6 476 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 ABCG4Q9H172 646 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 IRF2BPLQ9H1B7 796 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 U3KQV3 271 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 BCL9O00512 1426 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 MSL3P1P0C860 447 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 RAP2AP10114 183 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 CORO1AP31146 461 aaKnown RBP12.9□□□□□ -0.34
HLCS-201ENST00000336648 HOXC12P31275 282 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 ECT2LQ008S8 904 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 PCDH1Q08174 1060 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 HNRNPDQ14103 355 aaKnown RBP12.9□□□□□ -0.34
HLCS-201ENST00000336648 ARL13AQ5H913 290 aaPredicted RBP12.9□□□□□ -0.34
HLCS-201ENST00000336648 GPR158Q5T848 1215 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 GALNT5Q7Z7M9 940 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 LINC00471Q8N535 108 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 CCDC107Q8WV48 283 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 CDH7Q9ULB5 785 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 PCDHGB5Q9Y5G0 923 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 ARL5CA6NH57 179 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 CCRL2O00421 344 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 PRAMEF12O95522 483 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 AGR2O95994 175 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 SLC6A4P31645 630 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 OR2B6P58173 313 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 POM121L1PQ3SYA9 428 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 LDLRAP1Q5SW96 308 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 NUP54Q7Z3B4 507 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 LPPQ93052 612 aa12.9□□□□□ -0.34
HLCS-201ENST00000336648 HNRNPABQ99729 332 aaKnown RBP12.9□□□□□ -0.34
HLCS-201ENST00000336648 NIFKQ9BYG3 293 aaKnown RBP12.9□□□□□ -0.34
HLCS-201ENST00000336648 REXO2Q9Y3B8 237 aaKnown RBP12.9□□□□□ -0.34
HLCS-201ENST00000336648 PPRC1Q5VV67 1664 aaKnown RBP12.9□□□□□ -0.34
HLCS-201ENST00000336648 KCNU1A8MYU2 1149 aa12.9□□□□□ -0.35
HLCS-201ENST00000336648 ZNF823P16415 610 aa12.9□□□□□ -0.35
HLCS-201ENST00000336648 GNA12Q03113 381 aa12.9□□□□□ -0.35
HLCS-201ENST00000336648 SLC24A5Q71RS6 500 aa12.9□□□□□ -0.35
HLCS-201ENST00000336648 PCDH19Q8TAB3 1148 aa12.9□□□□□ -0.35
HLCS-201ENST00000336648 ASB12Q8WXK4 309 aa12.9□□□□□ -0.35
HLCS-201ENST00000336648 ZBED6CLQ96FA7 236 aaPredicted RBP12.9□□□□□ -0.35
HLCS-201ENST00000336648 KREMEN1Q96MU8 473 aa12.9□□□□□ -0.35
HLCS-201ENST00000336648 CXorf21Q9HAI6 301 aa12.9□□□□□ -0.35
HLCS-201ENST00000336648 DNAAF2Q9NVR5 837 aaKnown RBP12.9□□□□□ -0.35
HLCS-201ENST00000336648 LRRC72A6NJI9 287 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 DUXAA6NLW8 204 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 ANXA2P2A6NMY6 339 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 INSIG1O15503 277 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 HMGN1P05114 100 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 ANXA2P07355 339 aaKnown RBP12.89□□□□□ -0.35
HLCS-201ENST00000336648 RAB12Q6IQ22 244 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 GRHL2Q6ISB3 625 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 AHSA2Q719I0 299 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 ECHDC2Q86YB7 292 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 CBR4Q8N4T8 237 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 PACRGLQ8N7B6 248 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 RASGEF1AQ8N9B8 481 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 PFDN5Q99471 154 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 EQTNQ9NQ60 294 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 SMIM28A0A1B0GU29 152 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 H7C2Y5 167 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 PI15O43692 258 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 C4BPAP04003 597 aaKnown RBP12.89□□□□□ -0.35
HLCS-201ENST00000336648 ITGB5P18084 799 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 MASP1P48740 699 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 AFF1P51825 1210 aaKnown RBP12.89□□□□□ -0.35
HLCS-201ENST00000336648 DCDC1P59894 354 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 SSTP61278 116 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 ADAM8P78325 824 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 TAF1AQ15573 450 aaPredicted RBP12.89□□□□□ -0.35
HLCS-201ENST00000336648 MSANTD2Q6P1R3 559 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 CHST9Q7L1S5 443 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 CADM2Q8N3J6 435 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 MAFIPQ8WZ33 124 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 PCDHB18PQ96TA0 734 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 TTC34A8MYJ7 566 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 SLC33A1O00400 549 aaPredicted RBP12.89□□□□□ -0.35
HLCS-201ENST00000336648 CXCR6O00574 342 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 TSPAN1O60635 241 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 PRAMEF1O95521 474 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 CDKL4Q5MAI5 379 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 KIAA0930Q6ICG6 404 aaPredicted RBP12.89□□□□□ -0.35
HLCS-201ENST00000336648 USP30Q70CQ3 517 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 PHC2Q8IXK0 858 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 RBM18Q96H35 190 aaKnown RBP12.89□□□□□ -0.35
HLCS-201ENST00000336648 ELOVL2Q9NXB9 296 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 IGSF9Q9P2J2 1179 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 COPS7AQ9UBW8 275 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 MAP4K5Q9Y4K4 846 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 AQP12BA6NM10 295 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 L7N2F9 121 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 TP73O15350 636 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 B4GALT5O43286 388 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 FKTNO75072 461 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 IGFBP4P22692 258 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 NSG1P42857 185 aa12.89□□□□□ -0.35
HLCS-201ENST00000336648 VAMP2P63027 116 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms