RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 COMMD10Q9Y6G5 202 aa15.5■□□□□ 0.07
CCDC28A-201ENST00000332797 TCRBV9S1A1TA0A576 114 aa15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 FAM221BA6H8Z2 402 aa15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 SLCO2B1O94956 709 aa15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 GSTA2P09210 222 aa15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 ACADLP28330 430 aa15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 ECHS1P30084 290 aa15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 INHBCP55103 352 aa15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 CFHR1Q03591 330 aa15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 ABRQ12979 859 aa15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 CUL1Q13616 776 aa15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 CLPPQ16740 277 aaPredicted RBP15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 CEP128Q6ZU80 1094 aa15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 C3orf62Q6ZUJ4 267 aa15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 GALNT7Q86SF2 657 aa15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 SIDT2Q8NBJ9 832 aaKnown RBP15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 OR5AR1Q8NGP9 310 aa15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 CFAP61Q8NHU2 1237 aa15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 SKA2Q8WVK7 121 aaPredicted RBP15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 KCNJ9Q92806 393 aa15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 ATXN7L3BQ96GX2 97 aa15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 TRIT1Q9H3H1 467 aaKnown RBP15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 EPB41L1Q9H4G0 881 aa15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 KIR3DX1Q9H7L2 352 aa15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 MVB12BQ9H7P6 319 aa15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 OGFRQ9NZT2 677 aa15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 TMEM9Q9P0T7 183 aa15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 SLC24A2Q9UI40 661 aa15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 ENTPD2Q9Y5L3 495 aa15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 PSAT1Q9Y617 370 aa15.49■□□□□ 0.07
CCDC28A-201ENST00000332797 AKAP13Q12802 2813 aa15.48■□□□□ 0.07
CCDC28A-201ENST00000332797 VPS26AO75436 327 aa15.48■□□□□ 0.07
CCDC28A-201ENST00000332797 PIAS1O75925 651 aa15.48■□□□□ 0.07
CCDC28A-201ENST00000332797 HOXB3P14651 431 aaPredicted RBP15.48■□□□□ 0.07
CCDC28A-201ENST00000332797 MPSTP25325 297 aa15.48■□□□□ 0.07
CCDC28A-201ENST00000332797 CLCN7P51798 805 aa15.48■□□□□ 0.07
CCDC28A-201ENST00000332797 PRKG2Q13237 762 aa15.48■□□□□ 0.07
CCDC28A-201ENST00000332797 RBM20Q5T481 1227 aaKnown RBP15.48■□□□□ 0.07
CCDC28A-201ENST00000332797 PHF19Q5T6S3 580 aa15.48■□□□□ 0.07
CCDC28A-201ENST00000332797 STRA8Q7Z7C7 330 aa15.48■□□□□ 0.07
CCDC28A-201ENST00000332797 SLITRK4Q8IW52 837 aa15.48■□□□□ 0.07
CCDC28A-201ENST00000332797 GPATCH11Q8N954 259 aa15.48■□□□□ 0.07
CCDC28A-201ENST00000332797 ACVR1CQ8NER5 493 aa15.48■□□□□ 0.07
CCDC28A-201ENST00000332797 ZFPM2Q8WW38 1151 aa15.48■□□□□ 0.07
CCDC28A-201ENST00000332797 RSC1A1Q92681 617 aa15.48■□□□□ 0.07
CCDC28A-201ENST00000332797 CDKL2Q92772 493 aa15.48■□□□□ 0.07
CCDC28A-201ENST00000332797 TMEM74Q96NL1 305 aa15.48■□□□□ 0.07
CCDC28A-201ENST00000332797 GPR21Q99679 349 aa15.48■□□□□ 0.07
CCDC28A-201ENST00000332797 SLC30A3Q99726 388 aa15.48■□□□□ 0.07
CCDC28A-201ENST00000332797 TSPYL1Q9H0U9 437 aa15.48■□□□□ 0.07
CCDC28A-201ENST00000332797 SEMA6CQ9H3T2 930 aa15.48■□□□□ 0.07
CCDC28A-201ENST00000332797 LRRC4CQ9HCJ2 640 aa15.48■□□□□ 0.07
CCDC28A-201ENST00000332797 SMYD2Q9NRG4 433 aa15.48■□□□□ 0.07
CCDC28A-201ENST00000332797 NSMCE4AQ9NXX6 385 aa15.48■□□□□ 0.07
CCDC28A-201ENST00000332797 NFU1Q9UMS0 254 aa15.48■□□□□ 0.07
CCDC28A-201ENST00000332797 MED16Q9Y2X0 877 aa15.48■□□□□ 0.07
CCDC28A-201ENST00000332797 CEP295Q9C0D2 2601 aa15.48■□□□□ 0.07
CCDC28A-201ENST00000332797 AGRPO00253 132 aa15.47■□□□□ 0.07
CCDC28A-201ENST00000332797 STX2P32856 288 aa15.47■□□□□ 0.07
CCDC28A-201ENST00000332797 CAPZBP47756 277 aa15.47■□□□□ 0.07
CCDC28A-201ENST00000332797 SQSTM1Q13501 440 aa15.47■□□□□ 0.07
CCDC28A-201ENST00000332797 TTLL9Q3SXZ7 439 aa15.47■□□□□ 0.07
CCDC28A-201ENST00000332797 ACSBG2Q5FVE4 666 aa15.47■□□□□ 0.07
CCDC28A-201ENST00000332797 SNAP47Q5SQN1 464 aa15.47■□□□□ 0.07
CCDC28A-201ENST00000332797 TMEM71Q6P5X7 295 aa15.47■□□□□ 0.07
CCDC28A-201ENST00000332797 WDR74Q6RFH5 385 aaPredicted RBP15.47■□□□□ 0.07
CCDC28A-201ENST00000332797 ZNF574Q6ZN55 896 aaPredicted RBP15.47■□□□□ 0.07
CCDC28A-201ENST00000332797 SLC26A11Q86WA9 606 aa15.47■□□□□ 0.07
CCDC28A-201ENST00000332797 SPNS2Q8IVW8 549 aa15.47■□□□□ 0.07
CCDC28A-201ENST00000332797 OR4D9Q8NGE8 314 aa15.47■□□□□ 0.07
CCDC28A-201ENST00000332797 OR5K2Q8NHB8 316 aa15.47■□□□□ 0.07
CCDC28A-201ENST00000332797 GIMAP7Q8NHV1 300 aa15.47■□□□□ 0.07
CCDC28A-201ENST00000332797 CCDC74BQ96LY2 380 aa15.47■□□□□ 0.07
CCDC28A-201ENST00000332797 DPYSL5Q9BPU6 564 aa15.47■□□□□ 0.07
CCDC28A-201ENST00000332797 STRADBQ9C0K7 418 aa15.47■□□□□ 0.07
CCDC28A-201ENST00000332797 LATS2Q9NRM7 1088 aa15.47■□□□□ 0.07
CCDC28A-201ENST00000332797 KLHL3Q9UH77 587 aa15.47■□□□□ 0.07
CCDC28A-201ENST00000332797 TRMT6Q9UJA5 497 aaKnown RBP15.47■□□□□ 0.07
CCDC28A-201ENST00000332797 RUVBL2Q9Y230 463 aaKnown RBP15.47■□□□□ 0.07
CCDC28A-201ENST00000332797 TDRKHQ9Y2W6 561 aaKnown RBP15.47■□□□□ 0.07
CCDC28A-201ENST00000332797 IGHV5-10-1A0A0J9YXX1 117 aa15.46■□□□□ 0.07
CCDC28A-201ENST00000332797 CXorf49A8MYA2 514 aaPredicted RBP15.46■□□□□ 0.07
CCDC28A-201ENST00000332797 TMX2-CTNND1H3BSU7 103 aa15.46■□□□□ 0.07
CCDC28A-201ENST00000332797 SPAG6O75602 509 aa15.46■□□□□ 0.07
CCDC28A-201ENST00000332797 ATP5DP30049 168 aa15.46■□□□□ 0.07
CCDC28A-201ENST00000332797 CCKBRP32239 447 aa15.46■□□□□ 0.07
CCDC28A-201ENST00000332797 LIMK2P53671 638 aa15.46■□□□□ 0.07
CCDC28A-201ENST00000332797 CDKN2DP55273 166 aa15.46■□□□□ 0.07
CCDC28A-201ENST00000332797 GFERP55789 205 aa15.46■□□□□ 0.07
CCDC28A-201ENST00000332797 ZFP36L1Q07352 338 aaKnown RBP15.46■□□□□ 0.07
CCDC28A-201ENST00000332797 CAMK2BQ13554 666 aa15.46■□□□□ 0.07
CCDC28A-201ENST00000332797 GBX1Q14549 363 aa15.46■□□□□ 0.07
CCDC28A-201ENST00000332797 KYNUQ16719 465 aa15.46■□□□□ 0.07
CCDC28A-201ENST00000332797 KLHL35Q6PF15 583 aa15.46■□□□□ 0.07
CCDC28A-201ENST00000332797 UNC5DQ6UXZ4 953 aa15.46■□□□□ 0.07
CCDC28A-201ENST00000332797 TBC1D21Q8IYX1 336 aa15.46■□□□□ 0.07
CCDC28A-201ENST00000332797 RCBTB1Q8NDN9 531 aa15.46■□□□□ 0.07
CCDC28A-201ENST00000332797 OR52E1Q8NGJ3 308 aa15.46■□□□□ 0.07
CCDC28A-201ENST00000332797 CD200R1Q8TD46 325 aa15.46■□□□□ 0.07
CCDC28A-201ENST00000332797 FBF1Q8TES7 1133 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms