RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 MLYCDO95822 493 aa18.02■□□□□ 0.48
USP39-201ENST00000323701 PAK4O96013 591 aaPredicted RBP18.02■□□□□ 0.48
USP39-201ENST00000323701 ALDOCP09972 364 aaKnown RBP18.02■□□□□ 0.48
USP39-201ENST00000323701 PIK3R1P27986 724 aa18.02■□□□□ 0.48
USP39-201ENST00000323701 RASSF2P50749 326 aa18.02■□□□□ 0.48
USP39-201ENST00000323701 TRAF3Q13114 568 aa18.02■□□□□ 0.48
USP39-201ENST00000323701 SLC44A4Q53GD3 710 aa18.02■□□□□ 0.48
USP39-201ENST00000323701 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.02■□□□□ 0.48
USP39-201ENST00000323701 PNCKQ6P2M8 343 aa18.02■□□□□ 0.48
USP39-201ENST00000323701 GPRIN3Q6ZVF9 776 aa18.02■□□□□ 0.48
USP39-201ENST00000323701 HEATR4Q86WZ0 1026 aa18.02■□□□□ 0.48
USP39-201ENST00000323701 TRAPPC5Q8IUR0 188 aa18.02■□□□□ 0.48
USP39-201ENST00000323701 PARP9Q8IXQ6 854 aa18.02■□□□□ 0.48
USP39-201ENST00000323701 OR4F6Q8NGB9 312 aa18.02■□□□□ 0.48
USP39-201ENST00000323701 HBEGFQ99075 208 aa18.02■□□□□ 0.48
USP39-201ENST00000323701 TRPV5Q9NQA5 729 aa18.02■□□□□ 0.48
USP39-201ENST00000323701 ZFC3H1O60293 1989 aaKnown RBP18.02■□□□□ 0.47
USP39-201ENST00000323701 MATN4O95460 622 aa18.01■□□□□ 0.47
USP39-201ENST00000323701 MPC1LP0DKB6 136 aa18.01■□□□□ 0.47
USP39-201ENST00000323701 EPORP19235 508 aa18.01■□□□□ 0.47
USP39-201ENST00000323701 SLC25A3Q00325 362 aa18.01■□□□□ 0.47
USP39-201ENST00000323701 SULT1C3Q6IMI6 304 aa18.01■□□□□ 0.47
USP39-201ENST00000323701 CRTC3Q6UUV7 619 aa18.01■□□□□ 0.47
USP39-201ENST00000323701 AFAP1L2Q8N4X5 818 aa18.01■□□□□ 0.47
USP39-201ENST00000323701 GANCQ8TET4 914 aa18.01■□□□□ 0.47
USP39-201ENST00000323701 PYCR2Q96C36 320 aa18.01■□□□□ 0.47
USP39-201ENST00000323701 COX14Q96I36 57 aa18.01■□□□□ 0.47
USP39-201ENST00000323701 TRIM39Q9HCM9 518 aa18.01■□□□□ 0.47
USP39-201ENST00000323701 TNPO3Q9Y5L0 923 aaKnown RBP18.01■□□□□ 0.47
USP39-201ENST00000323701 TMEM265A0A087WTH1 108 aa18.01■□□□□ 0.47
USP39-201ENST00000323701 ARHGEF33A8MVX0 844 aa18.01■□□□□ 0.47
USP39-201ENST00000323701 COX4I1P13073 169 aa18.01■□□□□ 0.47
USP39-201ENST00000323701 HTR6P50406 440 aa18.01■□□□□ 0.47
USP39-201ENST00000323701 PLA2G4EQ3MJ16 856 aa18.01■□□□□ 0.47
USP39-201ENST00000323701 DOK6Q6PKX4 331 aa18.01■□□□□ 0.47
USP39-201ENST00000323701 TMEM92Q6UXU6 159 aa18.01■□□□□ 0.47
USP39-201ENST00000323701 C11orf96Q7Z7L8 435 aa18.01■□□□□ 0.47
USP39-201ENST00000323701 OR2T11Q8NH01 316 aa18.01■□□□□ 0.47
USP39-201ENST00000323701 UBTD2Q8WUN7 234 aa18.01■□□□□ 0.47
USP39-201ENST00000323701 HIC2Q96JB3 615 aa18.01■□□□□ 0.47
USP39-201ENST00000323701 SLC45A3Q96JT2 553 aa18.01■□□□□ 0.47
USP39-201ENST00000323701 POLG2Q9UHN1 485 aa18.01■□□□□ 0.47
USP39-201ENST00000323701 OR1A2Q9Y585 309 aa18.01■□□□□ 0.47
USP39-201ENST00000323701 KPNA5O15131 536 aa18■□□□□ 0.47
USP39-201ENST00000323701 HNRNPCL1O60812 293 aaKnown RBP18■□□□□ 0.47
USP39-201ENST00000323701 C8GP07360 202 aa18■□□□□ 0.47
USP39-201ENST00000323701 SMAD4Q13485 552 aaKnown RBP18■□□□□ 0.47
USP39-201ENST00000323701 STARD3Q14849 445 aa18■□□□□ 0.47
USP39-201ENST00000323701 SKIV2LQ15477 1246 aaKnown RBP18■□□□□ 0.47
USP39-201ENST00000323701 SYTL3Q4VX76 610 aa18■□□□□ 0.47
USP39-201ENST00000323701 OR14C36Q8NHC7 312 aa18■□□□□ 0.47
USP39-201ENST00000323701 TMEM159Q96B96 161 aa18■□□□□ 0.47
USP39-201ENST00000323701 CLPTM1LQ96KA5 538 aa18■□□□□ 0.47
USP39-201ENST00000323701 GAS2L1Q99501 681 aaPredicted RBP18■□□□□ 0.47
USP39-201ENST00000323701 TM7SF3Q9NS93 570 aa18■□□□□ 0.47
USP39-201ENST00000323701 SEC23IPQ9Y6Y8 1000 aaKnown RBP18■□□□□ 0.47
USP39-201ENST00000323701 CAPN1P07384 714 aa18■□□□□ 0.47
USP39-201ENST00000323701 ANXA5P08758 320 aa18■□□□□ 0.47
USP39-201ENST00000323701 ARL1P40616 181 aaPredicted RBP18■□□□□ 0.47
USP39-201ENST00000323701 PIK3CGP48736 1102 aa18■□□□□ 0.47
USP39-201ENST00000323701 CDK3Q00526 305 aa18■□□□□ 0.47
USP39-201ENST00000323701 GRSF1Q12849 480 aaKnown RBP eCLIP18■□□□□ 0.47
USP39-201ENST00000323701 INPP5AQ14642 412 aa18■□□□□ 0.47
USP39-201ENST00000323701 BCL7AQ4VC05 210 aa18■□□□□ 0.47
USP39-201ENST00000323701 TMEM31Q5JXX7 168 aa18■□□□□ 0.47
USP39-201ENST00000323701 Q7L0L9 218 aa18■□□□□ 0.47
USP39-201ENST00000323701 SNX32Q86XE0 403 aa18■□□□□ 0.47
USP39-201ENST00000323701 CFAP206Q8IYR0 622 aa18■□□□□ 0.47
USP39-201ENST00000323701 FAM13CQ8NE31 585 aa18■□□□□ 0.47
USP39-201ENST00000323701 RPLP0P6Q8NHW5 317 aa18■□□□□ 0.47
USP39-201ENST00000323701 FAM131CQ96AQ9 280 aa18■□□□□ 0.47
USP39-201ENST00000323701 EPHX3Q9H6B9 360 aa18■□□□□ 0.47
USP39-201ENST00000323701 OPTCQ9UBM4 332 aa18■□□□□ 0.47
USP39-201ENST00000323701 UBDO15205 165 aa17.99■□□□□ 0.47
USP39-201ENST00000323701 MGRN1O60291 552 aa17.99■□□□□ 0.47
USP39-201ENST00000323701 CRCPO75575 148 aa17.99■□□□□ 0.47
USP39-201ENST00000323701 STK16O75716 305 aa17.99■□□□□ 0.47
USP39-201ENST00000323701 UROSP10746 265 aa17.99■□□□□ 0.47
USP39-201ENST00000323701 DRD1P21728 446 aa17.99■□□□□ 0.47
USP39-201ENST00000323701 ADPRHP54922 357 aa17.99■□□□□ 0.47
USP39-201ENST00000323701 IRF4Q15306 451 aa17.99■□□□□ 0.47
USP39-201ENST00000323701 SDE2Q6IQ49 451 aa17.99■□□□□ 0.47
USP39-201ENST00000323701 ADAMTSL4Q6UY14 1074 aa17.99■□□□□ 0.47
USP39-201ENST00000323701 FAM83HQ6ZRV2 1179 aaPredicted RBP17.99■□□□□ 0.47
USP39-201ENST00000323701 NEK10Q6ZWH5 1172 aa17.99■□□□□ 0.47
USP39-201ENST00000323701 FAM124AQ86V42 546 aa17.99■□□□□ 0.47
USP39-201ENST00000323701 SLC22A15Q8IZD6 547 aa17.99■□□□□ 0.47
USP39-201ENST00000323701 OR9I1Q8NGQ6 314 aa17.99■□□□□ 0.47
USP39-201ENST00000323701 GLMNQ92990 594 aa17.99■□□□□ 0.47
USP39-201ENST00000323701 ATG10Q9H0Y0 220 aa17.99■□□□□ 0.47
USP39-201ENST00000323701 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.99■□□□□ 0.47
USP39-201ENST00000323701 SLC23A2Q9UGH3 650 aa17.99■□□□□ 0.47
USP39-201ENST00000323701 K7EPI3 171 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 QSOX1O00391 747 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 PLRG1O43660 514 aaKnown RBP17.98■□□□□ 0.47
USP39-201ENST00000323701 PSIP1O75475 530 aaKnown RBP17.98■□□□□ 0.47
USP39-201ENST00000323701 FUCA1P04066 466 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 MAT2AP31153 395 aaKnown RBP17.98■□□□□ 0.47
USP39-201ENST00000323701 BDKRB1P46663 353 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 CCINQ13939 588 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms