RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 C9JVG2 144 aa13.28□□□□□ -0.28
RFFL-201ENST00000315249 TPST2O60704 377 aa13.28□□□□□ -0.28
RFFL-201ENST00000315249 KAT7O95251 611 aa13.28□□□□□ -0.28
RFFL-201ENST00000315249 UROSP10746 265 aa13.28□□□□□ -0.28
RFFL-201ENST00000315249 LMAN2Q12907 356 aa13.28□□□□□ -0.28
RFFL-201ENST00000315249 GPR33Q49SQ1 333 aa13.28□□□□□ -0.28
RFFL-201ENST00000315249 KIAA0408Q6ZU52 694 aa13.28□□□□□ -0.28
RFFL-201ENST00000315249 SLC29A4Q7RTT9 530 aa13.28□□□□□ -0.28
RFFL-201ENST00000315249 RAB21Q9UL25 225 aa13.28□□□□□ -0.28
RFFL-201ENST00000315249 COL6A2P12110 1019 aa13.27□□□□□ -0.28
RFFL-201ENST00000315249 MSX2P35548 267 aaPredicted RBP13.27□□□□□ -0.28
RFFL-201ENST00000315249 CLCN7P51798 805 aa13.27□□□□□ -0.28
RFFL-201ENST00000315249 LIMK2P53671 638 aa13.27□□□□□ -0.28
RFFL-201ENST00000315249 PSMD4P55036 377 aaKnown RBP13.27□□□□□ -0.28
RFFL-201ENST00000315249 SLBPQ14493 270 aaKnown RBP eCLIP13.27□□□□□ -0.28
RFFL-201ENST00000315249 VPS26BQ4G0F5 336 aa13.27□□□□□ -0.28
RFFL-201ENST00000315249 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.27□□□□□ -0.28
RFFL-201ENST00000315249 FZD3Q9NPG1 666 aa13.27□□□□□ -0.28
RFFL-201ENST00000315249 HCN2Q9UL51 889 aa13.27□□□□□ -0.28
RFFL-201ENST00000315249 GNB5O14775 395 aa13.27□□□□□ -0.28
RFFL-201ENST00000315249 CNMDO75829 334 aa13.27□□□□□ -0.28
RFFL-201ENST00000315249 AHCYP23526 432 aa13.27□□□□□ -0.28
RFFL-201ENST00000315249 ELOCQ15369 112 aa13.27□□□□□ -0.28
RFFL-201ENST00000315249 OLFML1Q6UWY5 402 aa13.27□□□□□ -0.28
RFFL-201ENST00000315249 DCAF4L2Q8NA75 395 aa13.27□□□□□ -0.28
RFFL-201ENST00000315249 PLLPQ9Y342 182 aa13.27□□□□□ -0.28
RFFL-201ENST00000315249 MEIS3P2A8K0S8 358 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 BPGMP07738 259 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 FAM163BP0C2L3 166 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 BDKRB1P46663 353 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 DGCR6Q14129 220 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 KPNB1Q14974 876 aaKnown RBP13.27□□□□□ -0.29
RFFL-201ENST00000315249 MS4A4AQ96JQ5 239 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 METTL18O95568 372 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 IFNGP01579 166 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 SYPP08247 313 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 TNK2Q07912 1038 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 CYP2U1Q7Z449 544 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 C14orf80Q86SX3 495 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 BPIFB6Q8NFQ5 453 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 OVCA2Q8WZ82 227 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 CDKN2AIPNLQ96HQ2 116 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 MIPEPQ99797 713 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 GMPPBQ9Y5P6 360 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 LOC100506127A0A0U1RQW1 187 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 EFCAB10A6NFE3 127 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 C2orf71A6NGG8 1288 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 IL7RP16871 459 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 SLC7A1P30825 629 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 NCBP2P52298 156 aaKnown RBP eCLIP13.27□□□□□ -0.29
RFFL-201ENST00000315249 USP46P62068 366 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 ELOAQ14241 798 aaKnown RBP13.27□□□□□ -0.29
RFFL-201ENST00000315249 DHDDSQ86SQ9 333 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 CPNE8Q86YQ8 564 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 TMEM40Q8WWA1 233 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 PTCD3Q96EY7 689 aaKnown RBP13.27□□□□□ -0.29
RFFL-201ENST00000315249 CDK15Q96Q40 435 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 YIPF4Q9BSR8 244 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 DGCR6LQ9BY27 220 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 C6orf62Q9GZU0 229 aaPredicted RBP13.27□□□□□ -0.29
RFFL-201ENST00000315249 C8orf33Q9H7E9 229 aaPredicted RBP13.27□□□□□ -0.29
RFFL-201ENST00000315249 IGSF9Q9P2J2 1179 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 MYO7AQ13402 2215 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 F7P08709 466 aaPredicted RBP13.27□□□□□ -0.29
RFFL-201ENST00000315249 CYP4B1P13584 511 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 POLR2CP19387 275 aaPredicted RBP13.27□□□□□ -0.29
RFFL-201ENST00000315249 HSD17B2P37059 387 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 NUP62P37198 522 aaPredicted RBP13.27□□□□□ -0.29
RFFL-201ENST00000315249 GCNT6Q5T4J0 391 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 ERN2Q76MJ5 926 aaKnown RBP13.27□□□□□ -0.29
RFFL-201ENST00000315249 HIC2Q96JB3 615 aa13.27□□□□□ -0.29
RFFL-201ENST00000315249 MUSKO15146 869 aa13.26□□□□□ -0.29
RFFL-201ENST00000315249 JUNDP17535 347 aa13.26□□□□□ -0.29
RFFL-201ENST00000315249 SOX4Q06945 474 aaPredicted RBP13.26□□□□□ -0.29
RFFL-201ENST00000315249 TTMPQ5BVD1 217 aa13.26□□□□□ -0.29
RFFL-201ENST00000315249 ZNF805Q5CZA5 627 aa13.26□□□□□ -0.29
RFFL-201ENST00000315249 PDZK1Q5T2W1 519 aa13.26□□□□□ -0.29
RFFL-201ENST00000315249 PAQR3Q6TCH7 311 aa13.26□□□□□ -0.29
RFFL-201ENST00000315249 RASGEF1CQ8N431 466 aa13.26□□□□□ -0.29
RFFL-201ENST00000315249 AVL9Q8NBF6 648 aa13.26□□□□□ -0.29
RFFL-201ENST00000315249 MFHAS1Q9Y4C4 1052 aa13.26□□□□□ -0.29
RFFL-201ENST00000315249 TTC34A8MYJ7 566 aa13.26□□□□□ -0.29
RFFL-201ENST00000315249 CDC7O00311 574 aa13.26□□□□□ -0.29
RFFL-201ENST00000315249 ZNF30P17039 623 aa13.26□□□□□ -0.29
RFFL-201ENST00000315249 GRIA2P42262 883 aa13.26□□□□□ -0.29
RFFL-201ENST00000315249 PXNP49023 591 aaPredicted RBP13.26□□□□□ -0.29
RFFL-201ENST00000315249 WDR5P61964 334 aaKnown RBP13.26□□□□□ -0.29
RFFL-201ENST00000315249 ANKLE1Q8NAG6 615 aa13.26□□□□□ -0.29
RFFL-201ENST00000315249 CAMKVQ8NCB2 501 aa13.26□□□□□ -0.29
RFFL-201ENST00000315249 OTUB2Q96DC9 234 aa13.26□□□□□ -0.29
RFFL-201ENST00000315249 TEFMQ96QE5 360 aaKnown RBP13.26□□□□□ -0.29
RFFL-201ENST00000315249 C12orf65Q9H3J6 166 aaKnown RBP13.26□□□□□ -0.29
RFFL-201ENST00000315249 SIX2Q9NPC8 291 aa13.26□□□□□ -0.29
RFFL-201ENST00000315249 ERI3O43414 337 aaKnown RBP13.26□□□□□ -0.29
RFFL-201ENST00000315249 TCF4P15884 667 aa13.26□□□□□ -0.29
RFFL-201ENST00000315249 OGNP20774 298 aaKnown RBP13.26□□□□□ -0.29
RFFL-201ENST00000315249 MPIP34949 423 aa13.26□□□□□ -0.29
RFFL-201ENST00000315249 PBX1P40424 430 aa13.26□□□□□ -0.29
RFFL-201ENST00000315249 DHCR24Q15392 516 aa13.26□□□□□ -0.29
RFFL-201ENST00000315249 ZYG11AQ6WRX3 759 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms