RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 CHST14Q8NCH0 376 aa11.33□□□□□ -0.6
PTPN2-201ENST00000309660 SORCS1Q8WY21 1168 aa11.33□□□□□ -0.6
PTPN2-201ENST00000309660 C9orf16Q9BUW7 83 aa11.33□□□□□ -0.6
PTPN2-201ENST00000309660 CD244Q9BZW8 370 aa11.33□□□□□ -0.6
PTPN2-201ENST00000309660 AGPAT4Q9NRZ5 378 aa11.33□□□□□ -0.6
PTPN2-201ENST00000309660 PNPLA3Q9NST1 481 aa11.33□□□□□ -0.6
PTPN2-201ENST00000309660 VAPAQ9P0L0 249 aa11.33□□□□□ -0.6
PTPN2-201ENST00000309660 MAGED1Q9Y5V3 778 aaPredicted RBP11.33□□□□□ -0.6
PTPN2-201ENST00000309660 COMMD3-BMI1R4GMX3 469 aa11.33□□□□□ -0.6
PTPN2-201ENST00000309660 A0A1B0GVG6 124 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 UPK3BL1B0FP48 263 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 UPK3BL2E5RIL1 263 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 K7EPI3 171 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 CLOCKO15516 846 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 VARSP26640 1264 aaKnown RBP11.32□□□□□ -0.6
PTPN2-201ENST00000309660 YAP1P46937 504 aaKnown RBP11.32□□□□□ -0.6
PTPN2-201ENST00000309660 VEGFBP49765 207 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 NR1H2P55055 460 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 ZNF648Q5T619 568 aaPredicted RBP11.32□□□□□ -0.6
PTPN2-201ENST00000309660 Q6ZNB5 142 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 GCNT7Q6ZNI0 430 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 USP45Q70EL2 814 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 UBE2R2Q712K3 238 aaPredicted RBP11.32□□□□□ -0.6
PTPN2-201ENST00000309660 CHST15Q7LFX5 561 aaPredicted RBP11.32□□□□□ -0.6
PTPN2-201ENST00000309660 PHACTR4Q8IZ21 702 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 RGL4Q8IZJ4 473 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 BEND7Q8N7W2 519 aaPredicted RBP11.32□□□□□ -0.6
PTPN2-201ENST00000309660 ST13P5Q8NFI4 369 aaPredicted RBP11.32□□□□□ -0.6
PTPN2-201ENST00000309660 ITFG1Q8TB96 612 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 RHBDF1Q96CC6 855 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 PPP3R2Q96LZ3 170 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 BBS2Q9BXC9 721 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 MTG2Q9H4K7 406 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 THEGQ9P2T0 379 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 LIMD1Q9UGP4 676 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 PTBP2Q9UKA9 531 aaKnown RBP11.32□□□□□ -0.6
PTPN2-201ENST00000309660 CNOT11Q9UKZ1 510 aaKnown RBP11.32□□□□□ -0.6
PTPN2-201ENST00000309660 A0A1W2PQ67 120 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 OR2AG2A6NM03 316 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 VILLO15195 856 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 GPIP06744 558 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 ANXA5P08758 320 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 LHCGRP22888 699 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 MERTKQ12866 999 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 PYCR3Q53H96 274 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 NHSL2Q5HYW2 709 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 SERPINA13PQ6UXR4 307 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 CARM1Q86X55 608 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 CLEC4FQ8N1N0 589 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 RNF175Q8N4F7 328 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 DTWD1Q8N5C7 304 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 SLC13A3Q8WWT9 602 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 SELENOMQ8WWX9 145 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 SH3GL3Q99963 347 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 HAUS8Q9BT25 410 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 SLC46A2Q9BY10 475 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 SUV39H2Q9H5I1 410 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 PARVBQ9HBI1 364 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 LRTM1Q9HBL6 345 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 OARD1Q9Y530 152 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 GNGT2O14610 69 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 WDR47O94967 919 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 KCNH1O95259 989 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 CXCL14O95715 111 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 B3GALT4O96024 378 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 GNRH1P01148 92 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 HIST1H2AGP0C0S8 130 aaPredicted RBP11.32□□□□□ -0.6
PTPN2-201ENST00000309660 LAG3P18627 525 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 HIST1H2ADP20671 130 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 HRH2P25021 359 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 GNPDA1P46926 289 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 IST1P53990 364 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 FOXM1Q08050 763 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 RBBP5Q15291 538 aaKnown RBP11.32□□□□□ -0.6
PTPN2-201ENST00000309660 PGS1Q32NB8 556 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 GPRC6AQ5T6X5 926 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 CACHD1Q5VU97 1274 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 STK32CQ86UX6 486 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 ELMOD1Q8N336 334 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 PDPRQ8NCN5 879 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 HIST1H2AHQ96KK5 128 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 PHF12Q96QT6 1004 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 HIST1H2AJQ99878 128 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 H2AFJQ9BTM1 129 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 HTATIP2Q9BUP3 242 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 SLC2A11Q9BYW1 496 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 ELOVL6Q9H5J4 265 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 OLAHQ9NV23 265 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 STOML2Q9UJZ1 356 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 TMCO1Q9UM00 188 aa11.32□□□□□ -0.6
PTPN2-201ENST00000309660 RFPL2O75678 378 aa11.31□□□□□ -0.6
PTPN2-201ENST00000309660 FGF18O76093 207 aa11.31□□□□□ -0.6
PTPN2-201ENST00000309660 SNAP29O95721 258 aa11.31□□□□□ -0.6
PTPN2-201ENST00000309660 ENO2P09104 434 aaPredicted RBP11.31□□□□□ -0.6
PTPN2-201ENST00000309660 CCR7P32248 378 aa11.31□□□□□ -0.6
PTPN2-201ENST00000309660 NSG1P42857 185 aa11.31□□□□□ -0.6
PTPN2-201ENST00000309660 RECQLP46063 649 aaPredicted RBP11.31□□□□□ -0.6
PTPN2-201ENST00000309660 LAPTM5Q13571 262 aa11.31□□□□□ -0.6
PTPN2-201ENST00000309660 SULT1C3Q6IMI6 304 aa11.31□□□□□ -0.6
PTPN2-201ENST00000309660 C22orf39Q6P5X5 142 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms