RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 CDC7O00311 574 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 ARNTLO00327 626 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 OR4F21O95013 312 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 UROSP10746 265 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 DBTP11182 482 aaKnown RBP10.7□□□□□ -0.7
ZNF558-201ENST00000301475 POLR2EP19388 210 aaKnown RBP10.7□□□□□ -0.7
ZNF558-201ENST00000301475 WARSP23381 471 aaKnown RBP10.7□□□□□ -0.7
ZNF558-201ENST00000301475 CCR1P32246 355 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 CD86P42081 329 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 CLK1P49759 484 aaKnown RBP10.7□□□□□ -0.7
ZNF558-201ENST00000301475 SCNN1GP51170 649 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 IL1RL1Q01638 556 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 PON2Q15165 354 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 PNCKQ6P2M8 343 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 TUBA3EQ6PEY2 450 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 TTC23LQ6PF05 361 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 AGMOQ6ZNB7 445 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 ADHFE1Q8IWW8 467 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 CDYL2Q8N8U2 506 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 OR8J3Q8NGG0 315 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 RNF34Q969K3 372 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 UBE2FQ969M7 185 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 FAM162AQ96A26 154 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 MYOCQ99972 504 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 ELP3Q9H9T3 547 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 ADPRHL2Q9NX46 363 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 GALPQ9UBC7 116 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 CACNG4Q9UBN1 327 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 SNX6Q9UNH7 406 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 CSADQ9Y600 493 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 GBF1Q92538 1859 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 PCM1Q15154 2024 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 PAPPA2Q9BXP8 1791 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 A8MV72 311 aaPredicted RBP10.69□□□□□ -0.7
ZNF558-201ENST00000301475 H0Y626 953 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 CXCR6O00574 342 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 HAT1O14929 419 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 LDB2O43679 373 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 PGLSO95336 258 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 TRIM16O95361 564 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 SLC2A3P11169 496 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 ZNF135P52742 658 aaPredicted RBP10.69□□□□□ -0.7
ZNF558-201ENST00000301475 LILRA4P59901 499 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 CHRNEQ04844 493 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 RBBP7Q16576 425 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 SETMARQ53H47 684 aaPredicted RBP10.69□□□□□ -0.7
ZNF558-201ENST00000301475 SOWAHCQ53LP3 525 aaPredicted RBP10.69□□□□□ -0.7
ZNF558-201ENST00000301475 SNAP47Q5SQN1 464 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 CAPN13Q6MZZ7 669 aaPredicted RBP10.69□□□□□ -0.7
ZNF558-201ENST00000301475 CYP20A1Q6UW02 462 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 AHSA2Q719I0 299 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 CEP68Q76N32 757 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 MSRB3Q8IXL7 192 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 MICU2Q8IYU8 434 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 C10orf111Q8N326 155 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 KIAA1191Q96A73 305 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 PDLIM5Q96HC4 596 aaKnown RBP10.69□□□□□ -0.7
ZNF558-201ENST00000301475 SIGLEC11Q96RL6 698 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 CDADC1Q9BWV3 514 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 RNF39Q9H2S5 420 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 RNF167Q9H6Y7 350 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 HEBP1Q9NRV9 189 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 PLSCR3Q9NRY6 295 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 MED16Q9Y2X0 877 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 AREL1O15033 823 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 FAM20BO75063 409 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 F9P00740 461 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 GRK5P34947 590 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 HTR3AP46098 478 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 RFX4Q33E94 735 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 GTDC1Q4AE62 458 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 RAB41Q5JT25 222 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 PAQR3Q6TCH7 311 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 CCDC71Q8IV32 467 aaPredicted RBP10.69□□□□□ -0.7
ZNF558-201ENST00000301475 REM2Q8IYK8 340 aaPredicted RBP10.69□□□□□ -0.7
ZNF558-201ENST00000301475 SETD9Q8NE22 299 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 OR52B6Q8NGF0 335 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 SNX18Q96RF0 628 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 THUMPD3Q9BV44 507 aaKnown RBP10.69□□□□□ -0.7
ZNF558-201ENST00000301475 ADARB2Q9NS39 739 aaKnown RBP10.69□□□□□ -0.7
ZNF558-201ENST00000301475 DDX28Q9NUL7 540 aaKnown RBP10.69□□□□□ -0.7
ZNF558-201ENST00000301475 SCN3BQ9NY72 215 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 SLC25A37Q9NYZ2 338 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 FAM50BQ9Y247 325 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 POLR3HQ9Y535 204 aaPredicted RBP10.69□□□□□ -0.7
ZNF558-201ENST00000301475 ORC6Q9Y5N6 252 aa10.69□□□□□ -0.7
ZNF558-201ENST00000301475 NPEPPSL1A6NEC2 478 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 GABRDO14764 452 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 AIREO43918 545 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 PEX11BO96011 259 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 CD4P01730 458 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 GADD45AP24522 165 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 DAPP51397 102 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 DSC2Q02487 901 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 MVKQ03426 396 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 CYP4F3Q08477 520 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 PLEKHG6Q3KR16 790 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 CARD16Q5EG05 197 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 BRMS1LQ5PSV4 323 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 PHACTR4Q8IZ21 702 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms