RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 FBP2O00757 339 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 ENPP3O14638 875 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 KPNA5O15131 536 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 PIGRP01833 764 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 GNSP15586 552 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 CASP9P55211 416 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 DAOAP59103 153 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 MXD1Q05195 221 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 FAM72AQ5TYM5 149 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 FAM72DQ6L9T8 149 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 FAM72BQ86X60 149 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 HDDC3Q8N4P3 179 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 OR13C4Q8NGS5 318 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 SLC35F5Q8WV83 523 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 ATL1Q8WXF7 558 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 CENPIQ92674 756 aaPredicted RBP13.23□□□□□ -0.29
HPS3-201ENST00000296051 ROPN1LQ96C74 230 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 REPS1Q96D71 796 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 FAM83DQ9H4H8 585 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 PHF24Q9UPV7 400 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 QSOX1O00391 747 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 SOCS2O14508 198 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 WBP4O75554 376 aaKnown RBP13.22□□□□□ -0.29
HPS3-201ENST00000296051 HOXB8P17481 243 aaPredicted RBP13.22□□□□□ -0.29
HPS3-201ENST00000296051 ZNF132P52740 706 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 GRM2Q14416 872 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 FAAH2Q6GMR7 532 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 SLC2A7Q6PXP3 512 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 CPNE9Q8IYJ1 553 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 PXYLP1Q8TE99 480 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 KLHL32Q96NJ5 620 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 GPR22Q99680 433 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 HEPHQ9BQS7 1158 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 PRRG3Q9BZD7 231 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 SMOXQ9NWM0 555 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 KLHL20Q9Y2M5 609 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 OR10H1Q9Y4A9 318 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 F5P12259 2224 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.22□□□□□ -0.29
HPS3-201ENST00000296051 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.22□□□□□ -0.29
HPS3-201ENST00000296051 H3BNH8 94 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 TSTD2Q5T7W7 516 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 CLIP4Q8N3C7 705 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 SHDQ96IW2 340 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 PPP3R2Q96LZ3 170 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 EIF2B3Q9NR50 452 aaKnown RBP13.22□□□□□ -0.29
HPS3-201ENST00000296051 LRRC14BA6NHZ5 514 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 INPPL1O15357 1258 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 POP4O95707 220 aaKnown RBP13.22□□□□□ -0.29
HPS3-201ENST00000296051 GOT2P00505 430 aaKnown RBP13.22□□□□□ -0.29
HPS3-201ENST00000296051 ALOX5P09917 674 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 S100A1P23297 94 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 NOVP48745 357 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 UFM1P61960 85 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 ZNF423Q2M1K9 1284 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 GPR153Q6NV75 609 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 PAQR3Q6TCH7 311 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 PSMG2Q969U7 264 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 HERC2P3Q9BVR0 1158 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 PRDM16Q9HAZ2 1276 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 TDP1Q9NUW8 608 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 MRPS7Q9Y2R9 242 aaKnown RBP13.22□□□□□ -0.29
HPS3-201ENST00000296051 AKAP11Q9UKA4 1901 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 RHPN2P1A8MT19 583 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 XPNPEP2O43895 674 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 AIREO43918 545 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 SLC26A3P40879 764 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 DAG1Q14118 895 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 PARP15Q460N3 678 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 DDI2Q5TDH0 399 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 FOXB2Q5VYV0 432 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 CASP12Q6UXS9 341 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 PLEKHM3Q6ZWE6 761 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 RAVER1Q8IY67 606 aaKnown RBP13.22□□□□□ -0.29
HPS3-201ENST00000296051 PRSS58Q8IYP2 241 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 ZNF461Q8TAF7 563 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 BPIFB1Q8TDL5 484 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 IPPKQ9H8X2 491 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 MTRRQ9UBK8 725 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 N6AMT1Q9Y5N5 214 aa13.22□□□□□ -0.29
HPS3-201ENST00000296051 PARP4Q9UKK3 1724 aaKnown RBP13.22□□□□□ -0.29
HPS3-201ENST00000296051 AQP12BA6NM10 295 aa13.21□□□□□ -0.29
HPS3-201ENST00000296051 MYCLP1P12525 358 aaPredicted RBP13.21□□□□□ -0.29
HPS3-201ENST00000296051 HMGCS1Q01581 520 aa13.21□□□□□ -0.29
HPS3-201ENST00000296051 TRAP1Q12931 704 aaKnown RBP13.21□□□□□ -0.29
HPS3-201ENST00000296051 ATXN7L2Q5T6C5 722 aaPredicted RBP13.21□□□□□ -0.29
HPS3-201ENST00000296051 C17orf99Q6UX52 265 aa13.21□□□□□ -0.29
HPS3-201ENST00000296051 SLC22A16Q86VW1 577 aa13.21□□□□□ -0.29
HPS3-201ENST00000296051 GALNT13Q8IUC8 556 aa13.21□□□□□ -0.29
HPS3-201ENST00000296051 MMAAQ8IVH4 418 aaKnown RBP13.21□□□□□ -0.29
HPS3-201ENST00000296051 AQP12AQ8IXF9 295 aa13.21□□□□□ -0.29
HPS3-201ENST00000296051 TADA1Q96BN2 335 aa13.21□□□□□ -0.29
HPS3-201ENST00000296051 BCO2Q9BYV7 579 aa13.21□□□□□ -0.29
HPS3-201ENST00000296051 OSBPL2Q9H1P3 480 aa13.21□□□□□ -0.29
HPS3-201ENST00000296051 TNPO3Q9Y5L0 923 aaKnown RBP13.21□□□□□ -0.29
HPS3-201ENST00000296051 DENRO43583 198 aaKnown RBP13.21□□□□□ -0.29
HPS3-201ENST00000296051 GUCY1B2O75343 617 aa13.21□□□□□ -0.29
HPS3-201ENST00000296051 GNAO1P09471 354 aa13.21□□□□□ -0.29
HPS3-201ENST00000296051 SLC5A2P31639 672 aa13.21□□□□□ -0.29
HPS3-201ENST00000296051 BCAP31P51572 246 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms