RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 PCDHAC1Q9H158 963 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 IL1RAPQ9NPH3 570 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 TOR1BO14657 336 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 SRPRAP08240 638 aaKnown RBP17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 SPATA6LQ8N4H0 392 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 SNIP1Q8TAD8 396 aaKnown RBP17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 TRIT1Q9H3H1 467 aaKnown RBP17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 CHRAC1Q9NRG0 131 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 PDCD5O14737 125 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 KERAO60938 352 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 PAGE1O75459 146 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 CLDN9O95484 217 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 L1CAMP32004 1257 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 CDH15P55291 814 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 CARTPTQ16568 116 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 CHST15Q7LFX5 561 aaPredicted RBP17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 CXorf40AQ8TE69 158 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 ACOT12Q8WYK0 555 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 MAPKAP1Q9BPZ7 522 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 PCP4L1A6NKN8 68 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 TRBC1P01850 177 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 CCNYL3P0C7X3 344 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 ACSL1P33121 698 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 C16orf59Q7L2K0 433 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 OAFQ86UD1 273 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 SIAH1Q8IUQ4 282 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 USP29Q9HBJ7 922 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 CCM2LQ9NUG4 571 aaPredicted RBP17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 KCTD5Q9NXV2 234 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 KLRG2A4D1S0 409 aaPredicted RBP17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 ZNF879B4DU55 563 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 MAXP61244 160 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 SEMA3AQ14563 771 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 TLR1Q15399 786 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 SLC10A6Q3KNW5 377 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 FAM156AQ8NDB6 213 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 PHC3Q8NDX5 983 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 PCDH19Q8TAB3 1148 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 MTFMTQ96DP5 389 aaKnown RBP17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 MCUBQ9NWR8 336 aa17.25■□□□□ 0.35
PCDHA13-201ENST00000289272 A0A1W2PQ67 120 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 FUOMA2VDF0 154 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 H0Y858 1186 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 CCNIQ14094 377 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 OR52E8Q6IFG1 317 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 XKR5Q6UX68 686 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 BEND5Q7L4P6 421 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 PHOX2BQ99453 314 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 SLA2Q9H6Q3 261 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 FNIP2Q9P278 1114 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 KCNE2Q9Y6J6 123 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 SEPT4O43236 478 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 HNRNPDQ14103 355 aaKnown RBP17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 ATP13A5Q4VNC0 1218 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 TAPT1Q6NXT6 567 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 USP30Q70CQ3 517 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 TBC1D3BA6NDS4 549 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 FPR1P21462 350 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 MYF6P23409 242 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 CDH5P33151 784 aaPredicted RBP17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 TIFAQ96CG3 184 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 SNX27Q96L92 541 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 HNRNPABQ99729 332 aaKnown RBP17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 KCNS3Q9BQ31 491 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 MND1Q9BWT6 205 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 RPF2Q9H7B2 306 aaKnown RBP17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 NPEPPSL1A6NEC2 478 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 SYN3O14994 580 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 MATN3O15232 486 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 PDPK1O15530 556 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 XKR6Q5GH73 641 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 GPR158Q5T848 1215 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 ZNF767PQ75MW2 155 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 OR52B2Q96RD2 323 aa17.24■□□□□ 0.35
PCDHA13-201ENST00000289272 DFNA5O60443 496 aa17.23■□□□□ 0.35
PCDHA13-201ENST00000289272 PSKH1P11801 424 aa17.23■□□□□ 0.35
PCDHA13-201ENST00000289272 CD40LGP29965 261 aa17.23■□□□□ 0.35
PCDHA13-201ENST00000289272 CCR10P46092 362 aa17.23■□□□□ 0.35
PCDHA13-201ENST00000289272 SWI5Q1ZZU3 235 aa17.23■□□□□ 0.35
PCDHA13-201ENST00000289272 CLEC6AQ6EIG7 209 aa17.23■□□□□ 0.35
PCDHA13-201ENST00000289272 DPAGT1Q9H3H5 408 aa17.23■□□□□ 0.35
PCDHA13-201ENST00000289272 C1orf109Q9NX04 203 aa17.23■□□□□ 0.35
PCDHA13-201ENST00000289272 ZNF282Q9UDV7 671 aaPredicted RBP17.23■□□□□ 0.35
PCDHA13-201ENST00000289272 RNF6Q9Y252 685 aa17.23■□□□□ 0.35
PCDHA13-201ENST00000289272 LTBP3Q9NS15 1303 aa17.23■□□□□ 0.35
PCDHA13-201ENST00000289272 HTR3EA5X5Y0 456 aa17.23■□□□□ 0.35
PCDHA13-201ENST00000289272 GLUD1P00367 558 aa17.23■□□□□ 0.35
PCDHA13-201ENST00000289272 STOMP27105 288 aa17.23■□□□□ 0.35
PCDHA13-201ENST00000289272 CCL23P55773 120 aa17.23■□□□□ 0.35
PCDHA13-201ENST00000289272 NATD1Q8N6N6 113 aa17.23■□□□□ 0.35
PCDHA13-201ENST00000289272 ZNF641Q96N77 438 aaPredicted RBP17.23■□□□□ 0.35
PCDHA13-201ENST00000289272 SMAD5Q99717 465 aaKnown RBP17.23■□□□□ 0.35
PCDHA13-201ENST00000289272 THUMPD1Q9NXG2 353 aaKnown RBP17.23■□□□□ 0.35
PCDHA13-201ENST00000289272 TBC1D14Q9P2M4 693 aa17.23■□□□□ 0.35
PCDHA13-201ENST00000289272 ADAMTS6Q9UKP5 1117 aa17.23■□□□□ 0.35
PCDHA13-201ENST00000289272 BAZ2AQ9UIF9 1905 aaKnown RBP17.23■□□□□ 0.35
PCDHA13-201ENST00000289272 YBEYP58557 167 aaPredicted RBP17.23■□□□□ 0.35
PCDHA13-201ENST00000289272 RELAQ04206 551 aa17.23■□□□□ 0.35
PCDHA13-201ENST00000289272 PCLAFQ15004 111 aa17.23■□□□□ 0.35
PCDHA13-201ENST00000289272 SNAPC1Q16533 368 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms