RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 FAM169AQ9Y6X4 670 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 SPTBP11277 2137 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 SDK2Q58EX2 2172 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 BOD1L1Q8NFC6 3051 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 IQCF5A8MTL0 148 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 C9orf172C9J069 976 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 GOLGA8MH3BSY2 632 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 PLD2O14939 933 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 HGSO14964 777 aaPredicted RBP8.93□□□□□ -0.98
HMGN1-201ENST00000288344 NVLO15381 856 aaKnown RBP8.93□□□□□ -0.98
HMGN1-201ENST00000288344 EFSO43281 561 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 USP1O94782 785 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 SEC31AO94979 1220 aaKnown RBP8.93□□□□□ -0.98
HMGN1-201ENST00000288344 GAS8O95995 478 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 VIPP01282 170 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 ITGA2BP08514 1039 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 ANKRD34CP0C6C1 535 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 RALBP11234 206 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 CCL4P13236 92 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 AKT1P31749 480 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 BOP1Q14137 746 aaKnown RBP8.93□□□□□ -0.98
HMGN1-201ENST00000288344 MORF4L2Q15014 288 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 SEPT7Q16181 437 aaKnown RBP8.93□□□□□ -0.98
HMGN1-201ENST00000288344 DUPD1Q68J44 220 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 RAB11FIP2Q7L804 512 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 UNC5BQ8IZJ1 945 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 LSMEM2Q8N112 164 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 AVL9Q8NBF6 648 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 OR6P1Q8NGX9 317 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 FLVCR1-AS1Q8TAF5 88 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 ZCCHC14Q8WYQ9 949 aaKnown RBP8.93□□□□□ -0.98
HMGN1-201ENST00000288344 KLHL6Q8WZ60 621 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 FGF11Q92914 225 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 PMEPA1Q969W9 287 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 NXPE2Q96DL1 559 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 DCUN1D1Q96GG9 259 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 C9orf72Q96LT7 481 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 ZNF578Q96N58 590 aaPredicted RBP8.93□□□□□ -0.98
HMGN1-201ENST00000288344 SLC38A3Q99624 504 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 EBNA1BP2Q99848 306 aaKnown RBP8.93□□□□□ -0.98
HMGN1-201ENST00000288344 MCMBPQ9BTE3 642 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.93□□□□□ -0.98
HMGN1-201ENST00000288344 OSGEPL1Q9H4B0 414 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 TFB2MQ9H5Q4 396 aaKnown RBP8.93□□□□□ -0.98
HMGN1-201ENST00000288344 KIR3DX1Q9H7L2 352 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 CATSPERZQ9NTU4 200 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 OCIAD1Q9NX40 245 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 GALPQ9UBC7 116 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 SLC24A2Q9UI40 661 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 PSMD13Q9UNM6 376 aa8.93□□□□□ -0.98
HMGN1-201ENST00000288344 SNRNP200O75643 2136 aaKnown RBP8.93□□□□□ -0.98
HMGN1-201ENST00000288344 ADAMTS20P59510 1910 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 GOLGA6L10A0A0M3HER8 536 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 B4E171 279 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.92□□□□□ -0.98
HMGN1-201ENST00000288344 GOLGA8KD6RF30 607 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 GOLGA8TH3BQL2 631 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 QSOX1O00391 747 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 PRMT5O14744 637 aaPredicted RBP8.92□□□□□ -0.98
HMGN1-201ENST00000288344 LIN7AO14910 233 aaPredicted RBP8.92□□□□□ -0.98
HMGN1-201ENST00000288344 TOX3O15405 576 aaPredicted RBP8.92□□□□□ -0.98
HMGN1-201ENST00000288344 BANF1O75531 89 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 UBXN7O94888 489 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 POLBP06746 335 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 HGFP14210 728 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 VCLP18206 1134 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 ITIH1P19827 911 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 OGNP20774 298 aaKnown RBP8.92□□□□□ -0.98
HMGN1-201ENST00000288344 MPSTP25325 297 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 TSPAN7P41732 249 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 RPL21P46778 160 aaKnown RBP8.92□□□□□ -0.98
HMGN1-201ENST00000288344 PREPP48147 710 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 LEPRP48357 1165 aaKnown RBP8.92□□□□□ -0.98
HMGN1-201ENST00000288344 TTPAP49638 278 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 GFERP55789 205 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 PPP1CAP62136 330 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 GABREP78334 506 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 PRAMEP78395 509 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 MRPS25P82663 173 aaKnown RBP8.92□□□□□ -0.98
HMGN1-201ENST00000288344 SARNPP82979 210 aaKnown RBP8.92□□□□□ -0.98
HMGN1-201ENST00000288344 DR1Q01658 176 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 DHX34Q14147 1143 aaKnown RBP8.92□□□□□ -0.98
HMGN1-201ENST00000288344 FRG1Q14331 258 aaKnown RBP8.92□□□□□ -0.98
HMGN1-201ENST00000288344 TRADDQ15628 312 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 ST3GAL2Q16842 350 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 AMZ1Q400G9 498 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 FASTKD1Q53R41 847 aaKnown RBP8.92□□□□□ -0.98
HMGN1-201ENST00000288344 STEAP4Q687X5 459 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 NEPROQ6NW34 567 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 DUS1LQ6P1R4 473 aaKnown RBP8.92□□□□□ -0.98
HMGN1-201ENST00000288344 NAPRTQ6XQN6 538 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 PCGF5Q86SE9 256 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 CNTN4Q8IWV2 1026 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 KLHL7Q8IXQ5 586 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 SLC22A15Q8IZD6 547 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 RCBTB1Q8NDN9 531 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 PHC3Q8NDX5 983 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 RSC1A1Q92681 617 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 CCDC74BQ96LY2 380 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 RUNDC3BQ96NL0 473 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms