RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 CST1P01037 141 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 GSTM1P09488 218 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 PABPC4LP0CB38 370 aaKnown RBP9.41□□□□□ -0.9
SIM1-201ENST00000262901 MC4RP32245 332 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 ACSM2AQ08AH3 577 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 ZNF284Q2VY69 593 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 PXDC1Q5TGL8 231 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 ACSM2BQ68CK6 577 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 OR7D4Q8NG98 312 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 OLIG1Q8TAK6 271 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 TWIST2Q8WVJ9 160 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 GPR21Q99679 349 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 MIPEPQ99797 713 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 TEX12Q9BXU0 123 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 SLC39A8Q9C0K1 460 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 USE1Q9NZ43 259 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 PTTG2Q9NZH5 202 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 TEKT2Q9UIF3 430 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 TCAF1Q9Y4C2 921 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 POLR3HQ9Y535 204 aaPredicted RBP9.41□□□□□ -0.9
SIM1-201ENST00000262901 SH3PXD2BA1X283 911 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 GRM6O15303 877 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 RFPL1O75677 317 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 MYOGP15173 224 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 ITGAXP20702 1163 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 RAP1GDS1P52306 607 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 SLC18A1P54219 525 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 SMAD3P84022 425 aaKnown RBP9.4□□□□□ -0.9
SIM1-201ENST00000262901 ALDH6A1Q02252 535 aaKnown RBP9.4□□□□□ -0.9
SIM1-201ENST00000262901 IRF8Q02556 426 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 PPP1R8Q12972 351 aaKnown RBP9.4□□□□□ -0.9
SIM1-201ENST00000262901 SMAD4Q13485 552 aaKnown RBP9.4□□□□□ -0.9
SIM1-201ENST00000262901 HIST2H2ACQ16777 129 aaPredicted RBP9.4□□□□□ -0.9
SIM1-201ENST00000262901 SLC9A4Q6AI14 798 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 HIST2H2AA3Q6FI13 130 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 SYT12Q8IV01 421 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 OR8H2Q8N162 312 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 GRIN3AQ8TCU5 1115 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 BTN2A3PQ96KV6 586 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 SLC2A6Q9UGQ3 507 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 IQCF5A8MTL0 148 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 SLC22A3O75751 556 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 KCNH1O95259 989 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 TBX18O95935 607 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 PRLP01236 227 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 SELLP14151 372 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 ZNF37AP17032 561 aaPredicted RBP9.4□□□□□ -0.9
SIM1-201ENST00000262901 LPOP22079 712 aaPredicted RBP9.4□□□□□ -0.9
SIM1-201ENST00000262901 IGFBP4P22692 258 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 SLC26A3P40879 764 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 TRIM25Q14258 630 aaKnown RBP9.4□□□□□ -0.9
SIM1-201ENST00000262901 CES5AQ6NT32 575 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 RSPO2Q6UXX9 243 aaPredicted RBP9.4□□□□□ -0.9
SIM1-201ENST00000262901 ZNF704Q6ZNC4 412 aaPredicted RBP9.4□□□□□ -0.9
SIM1-201ENST00000262901 TRMT11Q7Z4G4 463 aaKnown RBP9.4□□□□□ -0.9
SIM1-201ENST00000262901 SFRP1Q8N474 314 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 NRG4Q8WWG1 115 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 ATL1Q8WXF7 558 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.4□□□□□ -0.9
SIM1-201ENST00000262901 PADI4Q9UM07 663 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 TLR6Q9Y2C9 796 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 RALGAPA2Q2PPJ7 1873 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 TCRBV5S1A1TA0A578 114 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 TRIM77I1YAP6 450 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 PER2O15055 1255 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 ABLIM3O94929 683 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 SEC24AO95486 1093 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 PRKCGP05129 697 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 HOXB8P17481 243 aaPredicted RBP9.4□□□□□ -0.9
SIM1-201ENST00000262901 MAGP20916 626 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 MAPK1P28482 360 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 AQP1P29972 269 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 PTGS2P35354 604 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 ERVFC1P60507 584 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 TSNQ15631 228 aaKnown RBP9.4□□□□□ -0.9
SIM1-201ENST00000262901 METTL2BQ6P1Q9 378 aaKnown RBP9.4□□□□□ -0.9
SIM1-201ENST00000262901 DENND1AQ8TEH3 1009 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 TMEM159Q96B96 161 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 PKMYT1Q99640 499 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 NMUR1Q9HB89 426 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 USP29Q9HBJ7 922 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 MIEF1Q9NQG6 463 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 IGSF9Q9P2J2 1179 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 TBC1D14Q9P2M4 693 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 CPNE7Q9UBL6 633 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 TRPC4Q9UBN4 977 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 ZDHHC2Q9UIJ5 367 aa9.4□□□□□ -0.9
SIM1-201ENST00000262901 AGO1Q9UL18 857 aaKnown RBP9.4□□□□□ -0.9
SIM1-201ENST00000262901 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.39□□□□□ -0.91
SIM1-201ENST00000262901 MYOCOSA0A1B0GUC4 107 aa9.39□□□□□ -0.91
SIM1-201ENST00000262901 HHLA1C9JL84 531 aa9.39□□□□□ -0.91
SIM1-201ENST00000262901 VILLO15195 856 aa9.39□□□□□ -0.91
SIM1-201ENST00000262901 ZBTB14O43829 449 aa9.39□□□□□ -0.91
SIM1-201ENST00000262901 AHSGP02765 367 aa9.39□□□□□ -0.91
SIM1-201ENST00000262901 HNRNPA1P09651 372 aaKnown RBP eCLIP9.39□□□□□ -0.91
SIM1-201ENST00000262901 NRIP1P48552 1158 aa9.39□□□□□ -0.91
SIM1-201ENST00000262901 RPL34P49207 117 aaKnown RBP9.39□□□□□ -0.91
SIM1-201ENST00000262901 CDH15P55291 814 aa9.39□□□□□ -0.91
SIM1-201ENST00000262901 TNK2Q07912 1038 aa9.39□□□□□ -0.91
SIM1-201ENST00000262901 REP15Q6BDI9 236 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms