RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 LILRA4P59901 499 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 CSNK2BP67870 215 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 TTLL4Q14679 1199 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 PON2Q15165 354 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 ZFP69Q49AA0 526 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 NOTUMQ6P988 496 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 CYP20A1Q6UW02 462 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 Q6ZSR9 355 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 GPRIN3Q6ZVF9 776 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 DET1Q7L5Y6 550 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 GPRIN1Q7Z2K8 1008 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 TAC4Q86UU9 113 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 TSPYL5Q86VY4 417 aaPredicted RBP11.31□□□□□ -0.6
TROAP-201ENST00000257909 FBXO16Q8IX29 292 aaPredicted RBP11.31□□□□□ -0.6
TROAP-201ENST00000257909 RAVER1Q8IY67 606 aaKnown RBP11.31□□□□□ -0.6
TROAP-201ENST00000257909 PEX13Q92968 403 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 TBC1D20Q96BZ9 403 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 DEPDC7Q96QD5 511 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 ACOX2Q99424 681 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 AARSD1Q9BTE6 412 aaKnown RBP11.31□□□□□ -0.6
TROAP-201ENST00000257909 RIBC2Q9H4K1 309 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 RNF19AQ9NV58 838 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 PCTPQ9UKL6 214 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 WBP11Q9Y2W2 641 aaKnown RBP11.31□□□□□ -0.6
TROAP-201ENST00000257909 GRIP1Q9Y3R0 1128 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 U3KQV3 271 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 LCHNA4D1U4 455 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 CCL22O00626 93 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 KLK8O60259 260 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 DFNA5O60443 496 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 PGLSO95336 258 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 G6PDP11413 515 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 NRIP1P48552 1158 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 CLK3P49761 638 aaKnown RBP11.3□□□□□ -0.6
TROAP-201ENST00000257909 RAD51Q06609 339 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 SIM2Q14190 667 aaPredicted RBP11.3□□□□□ -0.6
TROAP-201ENST00000257909 GBX1Q14549 363 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 MAD2L1BPQ15013 274 aaPredicted RBP11.3□□□□□ -0.6
TROAP-201ENST00000257909 BRMS1LQ5PSV4 323 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 CPZQ66K79 652 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 GALNT5Q7Z7M9 940 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 UBQLNLQ8IYU4 475 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 SLC22A15Q8IZD6 547 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 CELF2-AS1Q8N7Q2 184 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 KBTBD8Q8NFY9 601 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 GRPEL2Q8TAA5 225 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 ITCHQ96J02 903 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 SMOQ99835 787 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 NUAK2Q9H093 628 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 ACTL8Q9H568 366 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.3□□□□□ -0.6
TROAP-201ENST00000257909 INVSQ9Y283 1065 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 CAB39Q9Y376 341 aaPredicted RBP11.3□□□□□ -0.6
TROAP-201ENST00000257909 PCDHGB6Q9Y5F9 930 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 NYNRINQ9P2P1 1898 aaKnown RBP11.3□□□□□ -0.6
TROAP-201ENST00000257909 LOC110117498-PIK3R3F6TDL0 507 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 MITFO75030 526 aaPredicted RBP11.3□□□□□ -0.6
TROAP-201ENST00000257909 CREG1O75629 220 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 KRT6AP02538 564 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 KRT6BP04259 564 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 LCKP06239 509 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 OGNP20774 298 aaKnown RBP11.3□□□□□ -0.6
TROAP-201ENST00000257909 MAGP20916 626 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 AKT1P31749 480 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 CCR1P32246 355 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 ETV6P41212 452 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 CTSKP43235 329 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 RENBPP51606 427 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 CLCNKBP51801 687 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 DGKQP52824 942 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 ACVR1Q04771 509 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 PROX2Q3B8N5 592 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 LAIR1Q6GTX8 287 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 CYP4Z1Q86W10 505 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 SLC13A3Q8WWT9 602 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 PIK3R3Q92569 461 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 NCLNQ969V3 563 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 TBATAQ96M53 351 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 SIGLEC11Q96RL6 698 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 REXO4Q9GZR2 422 aaKnown RBP11.3□□□□□ -0.6
TROAP-201ENST00000257909 NXF3Q9H4D5 531 aaKnown RBP11.3□□□□□ -0.6
TROAP-201ENST00000257909 SLA2Q9H6Q3 261 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 RNF6Q9Y252 685 aa11.3□□□□□ -0.6
TROAP-201ENST00000257909 ANKRD36A6QL64 1941 aa11.29□□□□□ -0.6
TROAP-201ENST00000257909 ANKRD28O15084 1053 aa11.29□□□□□ -0.6
TROAP-201ENST00000257909 LDB2O43679 373 aa11.29□□□□□ -0.6
TROAP-201ENST00000257909 FKBP9O95302 570 aa11.29□□□□□ -0.6
TROAP-201ENST00000257909 SERPINF2P08697 491 aa11.29□□□□□ -0.6
TROAP-201ENST00000257909 DBTP11182 482 aaKnown RBP11.29□□□□□ -0.6
TROAP-201ENST00000257909 KCNE1P15382 129 aa11.29□□□□□ -0.6
TROAP-201ENST00000257909 AKAP5P24588 427 aa11.29□□□□□ -0.6
TROAP-201ENST00000257909 DDOSTP39656 456 aa11.29□□□□□ -0.6
TROAP-201ENST00000257909 CD86P42081 329 aa11.29□□□□□ -0.6
TROAP-201ENST00000257909 RABGGTBP53611 331 aa11.29□□□□□ -0.6
TROAP-201ENST00000257909 TSNQ15631 228 aaKnown RBP11.29□□□□□ -0.6
TROAP-201ENST00000257909 CCDC58Q4VC31 144 aa11.29□□□□□ -0.6
TROAP-201ENST00000257909 FBXO48Q5FWF7 155 aa11.29□□□□□ -0.6
TROAP-201ENST00000257909 SPANXN2Q5MJ10 180 aa11.29□□□□□ -0.6
TROAP-201ENST00000257909 AFMIDQ63HM1 303 aa11.29□□□□□ -0.6
TROAP-201ENST00000257909 KDM4DQ6B0I6 523 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms