RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 GCGRP47871 477 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 OR1D5P58170 312 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 GUCY2DQ02846 1103 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 EIF3IQ13347 325 aaKnown RBP11.02□□□□□ -0.65
SF3B6-201ENST00000233468 BOP1Q14137 746 aaKnown RBP11.02□□□□□ -0.65
SF3B6-201ENST00000233468 SEMA3AQ14563 771 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 CLCA4Q14CN2 919 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 PLCL1Q15111 1095 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 TTLL9Q3SXZ7 439 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 AMZ1Q400G9 498 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 MSS51Q4VC12 460 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 HSP90AA5PQ58FG0 334 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 CAPRIN2Q6IMN6 1127 aaKnown RBP11.02□□□□□ -0.65
SF3B6-201ENST00000233468 UGT3A1Q6NUS8 523 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 FAM83HQ6ZRV2 1179 aaPredicted RBP11.02□□□□□ -0.65
SF3B6-201ENST00000233468 LDB1Q86U70 411 aaPredicted RBP11.02□□□□□ -0.65
SF3B6-201ENST00000233468 PLXDC1Q8IUK5 500 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 FBXO36Q8NEA4 188 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 LPGAT1Q92604 370 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 CDKL2Q92772 493 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 CERS2Q96G23 380 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 FOPNLQ96NB1 174 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 LRRC1Q9BTT6 524 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 WWP1Q9H0M0 922 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 P2RY12Q9H244 342 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 MVB12BQ9H7P6 319 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 SLC40A1Q9NP59 571 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 IARS2Q9NSE4 1012 aaKnown RBP11.02□□□□□ -0.65
SF3B6-201ENST00000233468 SCHIP1Q9P0W5 487 aaPredicted RBP11.02□□□□□ -0.65
SF3B6-201ENST00000233468 ZNF624Q9P2J8 865 aaPredicted RBP11.02□□□□□ -0.65
SF3B6-201ENST00000233468 FBXO5Q9UKT4 447 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 PSMD13Q9UNM6 376 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 WDR37Q9Y2I8 494 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 AK5Q9Y6K8 562 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 PRSS21Q9Y6M0 314 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 KIF26BQ2KJY2 2108 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 LRRK1Q38SD2 2015 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 IGHV1OR21-1A0A087WYE8 117 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 B4GAT1O43505 415 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 CSO75390 466 aaKnown RBP11.01□□□□□ -0.65
SF3B6-201ENST00000233468 SPAG6O75602 509 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 UBXN7O94888 489 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 S1PR4O95977 384 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 PKMP14618 531 aaKnown RBP11.01□□□□□ -0.65
SF3B6-201ENST00000233468 MAPK9P45984 424 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 INHBCP55103 352 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 TUBB4BP68371 445 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 SLC7A5Q01650 507 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 HSPA14Q0VDF9 509 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 TRA2AQ13595 282 aaKnown RBP eCLIP11.01□□□□□ -0.65
SF3B6-201ENST00000233468 ISXQ2M1V0 245 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 PLEKHS1Q5SXH7 462 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 STEAP4Q687X5 459 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 TTC23LQ6PF05 361 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 WDR74Q6RFH5 385 aaPredicted RBP11.01□□□□□ -0.65
SF3B6-201ENST00000233468 UNC5AQ6ZN44 842 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 GALNT7Q86SF2 657 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 SFTPA2Q8IWL1 248 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 CNTN4Q8IWV2 1026 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 LSMEM2Q8N112 164 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 AGGF1Q8N302 714 aaeCLIP11.01□□□□□ -0.65
SF3B6-201ENST00000233468 SEC14L1Q92503 715 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 TFGQ92734 400 aaPredicted RBP11.01□□□□□ -0.65
SF3B6-201ENST00000233468 NXPE2Q96DL1 559 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 FERD3LQ96RJ6 166 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 INSM2Q96T92 566 aaPredicted RBP11.01□□□□□ -0.65
SF3B6-201ENST00000233468 NRSN2Q9GZP1 204 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 OR52A5Q9H2C5 316 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 TRIT1Q9H3H1 467 aaKnown RBP11.01□□□□□ -0.65
SF3B6-201ENST00000233468 PRORYQ9H606 182 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 SAYSD1Q9NPB0 183 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 GRHL1Q9NZI5 618 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 ZFATQ9P243 1243 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 KLHL42Q9P2K6 505 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 POLG2Q9UHN1 485 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 CORO1CQ9ULV4 474 aaPredicted RBP11.01□□□□□ -0.65
SF3B6-201ENST00000233468 CRYL1Q9Y2S2 319 aa11.01□□□□□ -0.65
SF3B6-201ENST00000233468 FLNBO75369 2602 aaKnown RBP11.01□□□□□ -0.65
SF3B6-201ENST00000233468 A0A1W2PQM1 296 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 SLC5A10A0PJK1 596 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 EIF4E1BA6NMX2 242 aaKnown RBP11□□□□□ -0.65
SF3B6-201ENST00000233468 TP73O15350 636 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 ZNF500O60304 480 aaPredicted RBP11□□□□□ -0.65
SF3B6-201ENST00000233468 BRINP1O60477 761 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 BANF1O75531 89 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 ERVK-10P10266 1014 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 AOAHP28039 575 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 CD1CP29017 333 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 CCKBRP32239 447 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 SKIV2L2P42285 1042 aaKnown RBP11□□□□□ -0.65
SF3B6-201ENST00000233468 SLC1A2P43004 574 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 LEPRP48357 1165 aaKnown RBP11□□□□□ -0.65
SF3B6-201ENST00000233468 CARSP49589 748 aaKnown RBP11□□□□□ -0.65
SF3B6-201ENST00000233468 MGAT5Q09328 741 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 PRKAA1Q13131 559 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 CTBP1Q13363 440 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 CUL1Q13616 776 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 HP1BP3Q5SSJ5 553 aaPredicted RBP11□□□□□ -0.65
SF3B6-201ENST00000233468 ARMC6Q6NXE6 501 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 TMEM71Q6P5X7 295 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms