RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 NPLOC4Q8TAT6 608 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 SLC2A13Q96QE2 648 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 ADAMTSL3P82987 1691 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 MAGEB17A8MXT2 336 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 H0Y858 1186 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 ATP6V1G1O75348 118 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 CDK14O94921 469 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 POU2F1P14859 743 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 VARSP26640 1264 aaKnown RBP16.39■□□□□ 0.21
SCARB2-210ENST00000638567 STC1P52823 247 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 PTSQ03393 145 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 ANGPT1Q15389 498 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 RGMBQ6NW40 437 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 TMEM126BQ8IUX1 230 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 KIAA1191Q96A73 305 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 SUSD3Q96L08 255 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 TSGA13Q96PP4 275 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 RAD18Q9NS91 495 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 ZNF624Q9P2J8 865 aaPredicted RBP16.39■□□□□ 0.21
SCARB2-210ENST00000638567 SNAI1O95863 264 aaPredicted RBP16.39■□□□□ 0.21
SCARB2-210ENST00000638567 ELFN1P0C7U0 828 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 NR2F6P10588 404 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 G6PDP11413 515 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 IL4RP24394 825 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 CXCR2P25025 360 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 MANFP55145 182 aaKnown RBP16.39■□□□□ 0.21
SCARB2-210ENST00000638567 ALFQ53S48 1182 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 ZNF557Q8N988 423 aaPredicted RBP16.39■□□□□ 0.21
SCARB2-210ENST00000638567 VANGL1Q8TAA9 524 aaPredicted RBP16.39■□□□□ 0.21
SCARB2-210ENST00000638567 MTERF1Q99551 399 aaKnown RBP16.39■□□□□ 0.21
SCARB2-210ENST00000638567 GTF2A1LQ9UNN4 478 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 MAP4K5Q9Y4K4 846 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 GDF5P43026 501 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 ASMTP46597 345 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 ENTPD1P49961 510 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 TUBA4AP68366 448 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 LAPTM5Q13571 262 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 CMPK2Q5EBM0 449 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 CAPN13Q6MZZ7 669 aaPredicted RBP16.38■□□□□ 0.21
SCARB2-210ENST00000638567 CACTIN-AS1Q8N1I8 211 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 OR10Q1Q8NGQ4 319 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 NSUN5Q96P11 429 aaKnown RBP16.38■□□□□ 0.21
SCARB2-210ENST00000638567 SOX17Q9H6I2 414 aaPredicted RBP16.38■□□□□ 0.21
SCARB2-210ENST00000638567 KAT8Q9H7Z6 458 aaKnown RBP16.38■□□□□ 0.21
SCARB2-210ENST00000638567 SSR3Q9UNL2 185 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 SLC9A8Q9Y2E8 581 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 LCHNA4D1U4 455 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 ZNF99A8MXY4 864 aaPredicted RBP16.38■□□□□ 0.21
SCARB2-210ENST00000638567 CDH12P55289 794 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 SMIM11AP58511 58 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 TCEA2Q15560 299 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 MYLK3Q32MK0 819 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 ZNF792Q3KQV3 632 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 AKAP14Q86UN6 197 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 C2orf73Q8N5S3 287 aaPredicted RBP16.38■□□□□ 0.21
SCARB2-210ENST00000638567 HIPK3Q9H422 1215 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 EXD2Q9NVH0 621 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 ZCWPW2A0A1B0GU75 182 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 SLC38A8A6NNN8 435 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 H3BM21 787 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 ALPIP09923 528 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 BUD31P41223 144 aaPredicted RBP16.38■□□□□ 0.21
SCARB2-210ENST00000638567 C2orf80Q0P641 193 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 SGCGQ13326 291 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 RFTN1Q14699 578 aaPredicted RBP16.38■□□□□ 0.21
SCARB2-210ENST00000638567 GPAT3Q53EU6 434 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 MS4A13Q5J8X5 152 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 FGD2Q7Z6J4 655 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 FNDC11Q9BVV2 318 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 SLC7A5P2Q9GIP4 190 aa16.38■□□□□ 0.21
SCARB2-210ENST00000638567 TRPM3Q9HCF6 1732 aaPredicted RBP16.38■□□□□ 0.21
SCARB2-210ENST00000638567 PGLSO95336 258 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 OGFRL1Q5TC84 451 aaPredicted RBP16.37■□□□□ 0.21
SCARB2-210ENST00000638567 KBTBD6Q86V97 674 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 FIBCD1Q8N539 461 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 ARL14EPQ8N8R7 260 aaPredicted RBP16.37■□□□□ 0.21
SCARB2-210ENST00000638567 KBTBD7Q8WVZ9 684 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 SUSD6Q92537 303 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 TRIM63Q969Q1 353 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 TAMM41Q96BW9 452 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 FAM83DQ9H4H8 585 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 RPS6KB2Q9UBS0 482 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 VPS51Q9UID3 782 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 MRPS7Q9Y2R9 242 aaKnown RBP16.37■□□□□ 0.21
SCARB2-210ENST00000638567 PTGDR2Q9Y5Y4 395 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 A0A1W2PQ67 120 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 CAPN14A8MX76 684 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 NEDD8-MDP1E9PL57 170 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 SLC28A2O43868 658 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 SERPINB7O75635 380 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 ACADVLP49748 655 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 CREB5Q02930 508 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 FOXM1Q08050 763 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 PYDC2Q56P42 97 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 CCDC149Q6ZUS6 474 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 OR4F6Q8NGB9 312 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 USP7Q93009 1102 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 MRGPRX2Q96LB1 330 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 COPS4Q9BT78 406 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 FNIP2Q9P278 1114 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms