RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 SLC37A2Q8TED4 501 aa6.29□□□□□ -1.4
TCF4-249ENST00000625716 HEXDCQ8WVB3 486 aa6.29□□□□□ -1.4
TCF4-249ENST00000625716 KCNE4Q8WWG9 221 aa6.29□□□□□ -1.4
TCF4-249ENST00000625716 ULK4Q96C45 1275 aa6.29□□□□□ -1.4
TCF4-249ENST00000625716 CXorf40BQ96DE9 158 aa6.29□□□□□ -1.4
TCF4-249ENST00000625716 DCUN1D1Q96GG9 259 aa6.29□□□□□ -1.4
TCF4-249ENST00000625716 ZNF514Q96K75 400 aaPredicted RBP6.29□□□□□ -1.4
TCF4-249ENST00000625716 DPH1Q9BZG8 443 aa6.29□□□□□ -1.4
TCF4-249ENST00000625716 ASB8Q9H765 288 aa6.29□□□□□ -1.4
TCF4-249ENST00000625716 UGT1A7Q9HAW7 530 aa6.29□□□□□ -1.4
TCF4-249ENST00000625716 UGT1A10Q9HAW8 530 aa6.29□□□□□ -1.4
TCF4-249ENST00000625716 UGT1A8Q9HAW9 530 aa6.29□□□□□ -1.4
TCF4-249ENST00000625716 RDH14Q9HBH5 336 aa6.29□□□□□ -1.4
TCF4-249ENST00000625716 SARS2Q9NP81 518 aaKnown RBP6.29□□□□□ -1.4
TCF4-249ENST00000625716 NPHS2Q9NP85 383 aa6.29□□□□□ -1.4
TCF4-249ENST00000625716 PRDM8Q9NQV8 689 aa6.29□□□□□ -1.4
TCF4-249ENST00000625716 TBC1D29Q9UFV1 150 aa6.29□□□□□ -1.4
TCF4-249ENST00000625716 PISDQ9UG56 409 aa6.29□□□□□ -1.4
TCF4-249ENST00000625716 CRLS1Q9UJA2 301 aa6.29□□□□□ -1.4
TCF4-249ENST00000625716 LOXL2Q9Y4K0 774 aa6.29□□□□□ -1.4
TCF4-249ENST00000625716 ST14Q9Y5Y6 855 aa6.29□□□□□ -1.4
TCF4-249ENST00000625716 SLC30A1Q9Y6M5 507 aa6.29□□□□□ -1.4
TCF4-249ENST00000625716 IGHV1OR21-1A0A087WYE8 117 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 IGHV5-10-1A0A0J9YXX1 117 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 TCRBV7S2A1N4TA0A589 114 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 KLHL33A6NCF5 533 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 OR2AG2A6NM03 316 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 EIF4E1BA6NMX2 242 aaKnown RBP6.28□□□□□ -1.4
TCF4-249ENST00000625716 ERI2A8K979 691 aaKnown RBP6.28□□□□□ -1.4
TCF4-249ENST00000625716 HGSO14964 777 aaPredicted RBP6.28□□□□□ -1.4
TCF4-249ENST00000625716 CASC3O15234 703 aaKnown RBP6.28□□□□□ -1.4
TCF4-249ENST00000625716 KLK10O43240 276 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 LIASO43766 372 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 EIF4EBP3O60516 100 aaPredicted RBP6.28□□□□□ -1.4
TCF4-249ENST00000625716 POP7O75817 140 aaKnown RBP6.28□□□□□ -1.4
TCF4-249ENST00000625716 SRP72O76094 671 aaKnown RBP6.28□□□□□ -1.4
TCF4-249ENST00000625716 METTL18O95568 372 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 AP2A1O95782 977 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 HGFP14210 728 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 AMD1P17707 334 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 TPH1P17752 444 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 RAB6AP20340 208 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 ITGALP20701 1170 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 RPL10P27635 214 aaKnown RBP6.28□□□□□ -1.4
TCF4-249ENST00000625716 ITPKBP27987 946 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 CD1CP29017 333 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 SLC5A2P31639 672 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 FDFT1P37268 417 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 PDX1P52945 283 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 LIMK2P53671 638 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 UCNP55089 124 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 ZFP36L1Q07352 338 aaKnown RBP6.28□□□□□ -1.4
TCF4-249ENST00000625716 CDH17Q12864 832 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 OLIG2Q13516 323 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 LAMB3Q13751 1172 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 KRT33BQ14525 404 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 PTPRCAPQ14761 206 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 ZRANB3Q5FWF4 1079 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 SNAP47Q5SQN1 464 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 FNBP1LQ5T0N5 605 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.28□□□□□ -1.4
TCF4-249ENST00000625716 GPRC6AQ5T6X5 926 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 TMEM71Q6P5X7 295 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 ZNF449Q6P9G9 518 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 TMEM220Q6QAJ8 160 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 C4orf22Q6V702 233 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 PPP1R21Q6ZMI0 780 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 ZNF662Q6ZS27 426 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 DET1Q7L5Y6 550 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 TAS2R42Q7RTR8 314 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 SNX20Q7Z614 316 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 ZNF761Q86XN6 746 aaPredicted RBP6.28□□□□□ -1.4
TCF4-249ENST00000625716 SLITRK4Q8IW52 837 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 RBM12BQ8IXT5 1001 aaKnown RBP6.28□□□□□ -1.4
TCF4-249ENST00000625716 AGBL5Q8NDL9 886 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 DDHD1Q8NEL9 900 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 OR4D9Q8NGE8 314 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 SLC35B2Q8TB61 432 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 C1orf54Q8WWF1 131 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 ATG4AQ8WYN0 398 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 NCSTNQ92542 709 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 WDR89Q96FK6 387 aaPredicted RBP6.28□□□□□ -1.4
TCF4-249ENST00000625716 PRR11Q96HE9 360 aaPredicted RBP6.28□□□□□ -1.4
TCF4-249ENST00000625716 CCDC74BQ96LY2 380 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 GORASP1Q9BQQ3 440 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 NUDT22Q9BRQ3 303 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 EPB41L1Q9H4G0 881 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 GRPEL1Q9HAV7 217 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 ARNT2Q9HBZ2 717 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 HOMER3Q9NSC5 361 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 CPNE7Q9UBL6 633 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 SLC23A2Q9UGH3 650 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 ZC3H7BQ9UGR2 993 aaKnown RBP6.28□□□□□ -1.4
TCF4-249ENST00000625716 R3HDM2Q9Y2K5 976 aaKnown RBP6.28□□□□□ -1.4
TCF4-249ENST00000625716 PPP2R2CQ9Y2T4 447 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 KCTD3Q9Y597 815 aa6.28□□□□□ -1.4
TCF4-249ENST00000625716 PCYT1BQ9Y5K3 369 aaPredicted RBP6.28□□□□□ -1.4
TCF4-249ENST00000625716 LRP4O75096 1905 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 TPRP12270 2363 aaKnown RBP6.27□□□□□ -1.41
TCF4-249ENST00000625716 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms