RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 BCL7AQ4VC05 210 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 TMEM198Q66K66 360 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 GTF2H2CQ6P1K8 395 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 RINLQ6ZS11 566 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 TMPRSS6Q8IU80 811 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 TRAPPC5Q8IUR0 188 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 TEX9Q8N6V9 391 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 PLA2G15Q8NCC3 412 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 ASB11Q8WXH4 323 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 HIC2Q96JB3 615 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 HIST1H2AHQ96KK5 128 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 ZNF382Q96SR6 550 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 HIST1H2AJQ99878 128 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 H2AFJQ9BTM1 129 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 PHF7Q9BWX1 381 aaPredicted RBP21.03■□□□□ 0.96
SPAST-204ENST00000621856 SLC12A9Q9BXP2 914 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 SLC6A17Q9H1V8 727 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 NOL11Q9H8H0 719 aaKnown RBP21.03■□□□□ 0.96
SPAST-204ENST00000621856 PARVBQ9HBI1 364 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 DNAJC15Q9Y5T4 150 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 TRPM6Q9BX84 2022 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 SLCO2B1O94956 709 aa21.02■□□□□ 0.96
SPAST-204ENST00000621856 PKNOX1P55347 436 aa21.02■□□□□ 0.96
SPAST-204ENST00000621856 MRPS21P82921 87 aaKnown RBP21.02■□□□□ 0.96
SPAST-204ENST00000621856 KLF10Q13118 480 aa21.02■□□□□ 0.96
SPAST-204ENST00000621856 PNCKQ6P2M8 343 aa21.02■□□□□ 0.96
SPAST-204ENST00000621856 ADAMTSL4Q6UY14 1074 aa21.02■□□□□ 0.96
SPAST-204ENST00000621856 MBOAT1Q6ZNC8 495 aa21.02■□□□□ 0.96
SPAST-204ENST00000621856 DDIASQ8IXT1 998 aa21.02■□□□□ 0.96
SPAST-204ENST00000621856 UBTD2Q8WUN7 234 aa21.02■□□□□ 0.96
SPAST-204ENST00000621856 GLMNQ92990 594 aa21.02■□□□□ 0.96
SPAST-204ENST00000621856 ATP6V1E2Q96A05 226 aa21.02■□□□□ 0.96
SPAST-204ENST00000621856 MARK4Q96L34 752 aa21.02■□□□□ 0.96
SPAST-204ENST00000621856 TMEM79Q9BSE2 394 aa21.02■□□□□ 0.96
SPAST-204ENST00000621856 BTBD10Q9BSF8 475 aa21.02■□□□□ 0.96
SPAST-204ENST00000621856 CD244Q9BZW8 370 aa21.02■□□□□ 0.96
SPAST-204ENST00000621856 ATXN10Q9UBB4 475 aa21.02■□□□□ 0.96
SPAST-204ENST00000621856 OPTCQ9UBM4 332 aa21.02■□□□□ 0.96
SPAST-204ENST00000621856 STK38LQ9Y2H1 464 aa21.02■□□□□ 0.96
SPAST-204ENST00000621856 A0A1B0GTL3 188 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 A0A1W2PQF6 199 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 PRR23AA6NEV1 266 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 B2RBV5 119 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 GYG2O15488 501 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 VEGFDO43915 354 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 CHEK2O96017 543 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 KRT16P08779 473 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 PRDX3P30048 256 aaKnown RBP21.01■□□□□ 0.95
SPAST-204ENST00000621856 PREPP48147 710 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 CDKL4Q5MAI5 379 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 IER5LQ5T953 404 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 EFL1Q7Z2Z2 1120 aaKnown RBP21.01■□□□□ 0.95
SPAST-204ENST00000621856 OR14C36Q8NHC7 312 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 LENG8Q96PV6 779 aaPredicted RBP21.01■□□□□ 0.95
SPAST-204ENST00000621856 TBC1D10AQ9BXI6 508 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 NUSAP1Q9BXS6 441 aaKnown RBP21.01■□□□□ 0.95
SPAST-204ENST00000621856 F5P12259 2224 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 TRIOBPQ9H2D6 2365 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 SOX1O00570 391 aaPredicted RBP21.01■□□□□ 0.95
SPAST-204ENST00000621856 PIP5K1BO14986 540 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 NARSO43776 548 aaKnown RBP21.01■□□□□ 0.95
SPAST-204ENST00000621856 OR4F21O95013 312 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 UROSP10746 265 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 MXRA7P84157 204 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 CDKL1Q00532 357 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 ABRQ12979 859 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 WSCD2Q2TBF2 565 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 HEATR4Q86WZ0 1026 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 TCAIMQ8N3R3 496 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 POU5F2Q8N7G0 328 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 CFAP61Q8NHU2 1237 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 MCOLN3Q8TDD5 553 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 CMTM5Q96DZ9 223 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 ZNF514Q96K75 400 aaPredicted RBP21.01■□□□□ 0.95
SPAST-204ENST00000621856 BTRCQ9Y297 605 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 TIMM22Q9Y584 194 aa21.01■□□□□ 0.95
SPAST-204ENST00000621856 SLC5A10A0PJK1 596 aa21■□□□□ 0.95
SPAST-204ENST00000621856 GFYI3L273 518 aa21■□□□□ 0.95
SPAST-204ENST00000621856 ZNF8P17098 575 aaPredicted RBP21■□□□□ 0.95
SPAST-204ENST00000621856 NAA25Q14CX7 972 aa21■□□□□ 0.95
SPAST-204ENST00000621856 TTC31Q49AM3 519 aaPredicted RBP21■□□□□ 0.95
SPAST-204ENST00000621856 DOK6Q6PKX4 331 aa21■□□□□ 0.95
SPAST-204ENST00000621856 LONP2Q86WA8 852 aa21■□□□□ 0.95
SPAST-204ENST00000621856 CPSF7Q8N684 471 aaKnown RBP21■□□□□ 0.95
SPAST-204ENST00000621856 LILRA3Q8N6C8 439 aaPredicted RBP21■□□□□ 0.95
SPAST-204ENST00000621856 OR52B6Q8NGF0 335 aa21■□□□□ 0.95
SPAST-204ENST00000621856 IPPKQ9H8X2 491 aa21■□□□□ 0.95
SPAST-204ENST00000621856 ZNF225Q9UK10 706 aa21■□□□□ 0.95
SPAST-204ENST00000621856 ATP6AP2A0A1C7CYW4 349 aa20.99■□□□□ 0.95
SPAST-204ENST00000621856 K7EPI3 171 aa20.99■□□□□ 0.95
SPAST-204ENST00000621856 OR7A17O14581 309 aa20.99■□□□□ 0.95
SPAST-204ENST00000621856 ATP6AP2O75787 350 aa20.99■□□□□ 0.95
SPAST-204ENST00000621856 OTCP00480 354 aa20.99■□□□□ 0.95
SPAST-204ENST00000621856 GSTM1P09488 218 aa20.99■□□□□ 0.95
SPAST-204ENST00000621856 MAP4P27816 1152 aaKnown RBP20.99■□□□□ 0.95
SPAST-204ENST00000621856 PIK3R1P27986 724 aa20.99■□□□□ 0.95
SPAST-204ENST00000621856 PRDX6P30041 224 aa20.99■□□□□ 0.95
SPAST-204ENST00000621856 GDF5P43026 501 aa20.99■□□□□ 0.95
SPAST-204ENST00000621856 CCNG1P51959 295 aa20.99■□□□□ 0.95
SPAST-204ENST00000621856 RPS21P63220 83 aaKnown RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms