RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 B3GALT6Q96L58 329 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 CAMKK2Q96RR4 588 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 CYP2S1Q96SQ9 504 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 BARD1Q99728 777 aaKnown RBP6.57□□□□□ -1.36
LMO3-235ENST00000616247 EGFL8Q99944 293 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 C11orf84Q9BUA3 381 aaPredicted RBP6.57□□□□□ -1.36
LMO3-235ENST00000616247 PRKD2Q9BZL6 878 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 DPY30Q9C005 99 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 R3HDMLQ9H3Y0 253 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 AIG1Q9NVV5 245 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 UXTQ9UBK9 157 aaPredicted RBP6.57□□□□□ -1.36
LMO3-235ENST00000616247 SAMHD1Q9Y3Z3 626 aaKnown RBP6.57□□□□□ -1.36
LMO3-235ENST00000616247 ZNF451Q9Y4E5 1061 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 IPPQ9Y573 584 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 PDE4DIPQ5VU43 2346 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 SHROOM3Q8TF72 1996 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 SLC12A8A0AV02 714 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 SMIM30A4D0T7 59 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 FAM172BPA6NC97 362 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 SAGE2PA6NJ88 616 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 ZBTB42B2RXF5 422 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 E5RI56 91 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 CTDSP2O14595 271 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 ARHGEF9O43307 516 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 ICMTO60725 284 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 LRATO95237 230 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 VIPP01282 170 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 MYL3P08590 195 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 EFNA1P20827 205 aaPredicted RBP6.57□□□□□ -1.36
LMO3-235ENST00000616247 EPHA2P29317 976 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 AQP1P29972 269 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 SLC26A3P40879 764 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 SLC15A1P46059 708 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 MASP1P48740 699 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 HMGCS1Q01581 520 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 EMX2Q04743 252 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 RAD51Q06609 339 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 RCAN2Q14206 197 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 KCTD2Q14681 263 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 MED22Q15528 200 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 TIGD6Q17RP2 521 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 OTUD1Q5VV17 481 aaPredicted RBP6.57□□□□□ -1.36
LMO3-235ENST00000616247 DCAF15Q66K64 600 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 MRNIPQ6NTE8 343 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 ZNF544Q6NX49 715 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 C8orf82Q6P1X6 216 aaPredicted RBP6.57□□□□□ -1.36
LMO3-235ENST00000616247 ANGPTL8Q6UXH0 198 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 Q6ZPB1 254 aaPredicted RBP6.57□□□□□ -1.36
LMO3-235ENST00000616247 SPATA19Q7Z5L4 167 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 B3GNT8Q7Z7M8 397 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 OSTM1Q86WC4 334 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 CILP2Q8IUL8 1156 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 ZDHHC21Q8IVQ6 265 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 PEX5LQ8IYB4 626 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 PARP16Q8N5Y8 322 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 EFHBQ8N7U6 833 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 OR52B6Q8NGF0 335 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 PYCR2Q96C36 320 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 REXO5Q96IC2 774 aaKnown RBP6.57□□□□□ -1.36
LMO3-235ENST00000616247 TMEM209Q96SK2 561 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 PHOX2BQ99453 314 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 COPS4Q9BT78 406 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 APOL5Q9BWW9 433 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 MUC13Q9H3R2 512 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 TIGARQ9NQ88 270 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 KRT84Q9NSB2 600 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 ZNF112Q9UJU3 913 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 ARL5AQ9Y689 179 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 GOLGA4Q13439 2230 aaKnown RBP6.57□□□□□ -1.36
LMO3-235ENST00000616247 IGKV6D-21A0A0A0MT36 114 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 FAM92AA1XBS5 289 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 FAM234BA2RU67 622 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 MYBPHLA2RUH7 354 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 AGAP5A6NIR3 686 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 UPK1AO00322 258 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 CD3EAPO15446 510 aaKnown RBP6.56□□□□□ -1.36
LMO3-235ENST00000616247 TLR5O60602 858 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 TNFRSF21O75509 655 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 ECI2O75521 394 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 USP2O75604 605 aaPredicted RBP6.56□□□□□ -1.36
LMO3-235ENST00000616247 CD1DP15813 335 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 PRKCAP17252 672 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 MSH3P20585 1137 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 ENDOUP21128 410 aaKnown RBP6.56□□□□□ -1.36
LMO3-235ENST00000616247 IGFBP6P24592 240 aaPredicted RBP6.56□□□□□ -1.36
LMO3-235ENST00000616247 GRK3P35626 688 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 HTR2BP41595 481 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 ERVK-8P63133 956 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 MXD1Q05195 221 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 FOXM1Q08050 763 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 PTPRNQ16849 979 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 AGAP6Q5VW22 663 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 NXNL2Q5VZ03 156 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 ERAP2Q6P179 960 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 SYCE2Q6PIF2 218 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 CYP20A1Q6UW02 462 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 CLEC20AQ6ZU45 233 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 NECAB2Q7Z6G3 386 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 NRARPQ7Z6K4 114 aa6.56□□□□□ -1.36
LMO3-235ENST00000616247 TAC4Q86UU9 113 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms