RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 PAGE2BQ5JRK9 111 aa21.6■■□□□ 1.05
POLR2J3-220ENST00000613744 BLOC1S3Q6QNY0 202 aa21.6■■□□□ 1.05
POLR2J3-220ENST00000613744 TMC5Q6UXY8 1006 aa21.6■■□□□ 1.05
POLR2J3-220ENST00000613744 DNAJB7Q7Z6W7 309 aaPredicted RBP21.6■■□□□ 1.05
POLR2J3-220ENST00000613744 DEFB106AQ8N104 65 aa21.6■■□□□ 1.05
POLR2J3-220ENST00000613744 C2CD4AQ8NCU7 369 aaPredicted RBP21.6■■□□□ 1.05
POLR2J3-220ENST00000613744 EDEM1Q92611 657 aa21.6■■□□□ 1.05
POLR2J3-220ENST00000613744 ZNF566Q969W8 418 aa21.6■■□□□ 1.05
POLR2J3-220ENST00000613744 BIRC7Q96CA5 298 aa21.6■■□□□ 1.05
POLR2J3-220ENST00000613744 NODALQ96S42 347 aa21.6■■□□□ 1.05
POLR2J3-220ENST00000613744 CDX2Q99626 313 aaPredicted RBP21.6■■□□□ 1.05
POLR2J3-220ENST00000613744 PAK1IP1Q9NWT1 392 aaPredicted RBP21.6■■□□□ 1.05
POLR2J3-220ENST00000613744 USE1Q9NZ43 259 aa21.6■■□□□ 1.05
POLR2J3-220ENST00000613744 NEMP2A6NFY4 417 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 EEF2KO00418 725 aaKnown RBP21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 VPS4BO75351 444 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 NPPAP01160 153 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 CCDC159P0C7I6 412 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 MTHFD1P11586 935 aaKnown RBP21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 AIF1P55008 147 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 VEPH1Q14D04 833 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 ACAP2Q15057 778 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 BTBD8Q5XKL5 378 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 GALNT13Q8IUC8 556 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 HS6ST3Q8IZP7 471 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 PJA1Q8NG27 643 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 DYNC2LI1Q8TCX1 351 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 CAPSLQ8WWF8 208 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 OR2B2Q9GZK3 357 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 NTN4Q9HB63 628 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 SLC52A3Q9NQ40 469 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 MAFFQ9ULX9 164 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 DOCK6Q96HP0 2047 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 ZFC3H1O60293 1989 aaKnown RBP21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 A0A1W2PP18 115 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 UPK1AO00322 258 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 SNPHO15079 494 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 UPK1BO75841 260 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 NDST3O95803 873 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 S100BP04271 92 aaPredicted RBP21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 HMGA1P17096 107 aaKnown RBP21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 EIF2DP41214 584 aaKnown RBP21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 SULT1E1P49888 294 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 TAF10Q12962 218 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 IL18R1Q13478 541 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 KRR1Q13601 381 aaKnown RBP21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 CAPRIN1Q14444 709 aaKnown RBP21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 SLC14A2Q15849 920 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 DPY19L1Q2PZI1 675 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 PRR23BQ6ZRT6 265 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 FAM131BQ86XD5 332 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 TSPAN17Q96FV3 270 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 CDCA3Q99618 268 aaPredicted RBP21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 FBRSL1Q9HCM7 1045 aaKnown RBP21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 TMEM45AQ9NWC5 275 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 FAM118AQ9NWS6 357 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 MAGEL2Q9UJ55 1249 aa21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 OAS3Q9Y6K5 1087 aaKnown RBP21.59■■□□□ 1.05
POLR2J3-220ENST00000613744 PATJQ8NI35 1801 aa21.58■■□□□ 1.05
POLR2J3-220ENST00000613744 SYNJ2BP-COX16A0A087WUM0 186 aa21.58■■□□□ 1.05
POLR2J3-220ENST00000613744 TAF4O00268 1085 aa21.58■■□□□ 1.05
POLR2J3-220ENST00000613744 KMOO15229 486 aa21.58■■□□□ 1.05
POLR2J3-220ENST00000613744 ACVR2AP27037 513 aa21.58■■□□□ 1.05
POLR2J3-220ENST00000613744 IL12AP29459 219 aa21.58■■□□□ 1.05
POLR2J3-220ENST00000613744 HCAR3P49019 387 aa21.58■■□□□ 1.05
POLR2J3-220ENST00000613744 TPD52P55327 224 aaPredicted RBP21.58■■□□□ 1.05
POLR2J3-220ENST00000613744 NFKB2Q00653 900 aa21.58■■□□□ 1.05
POLR2J3-220ENST00000613744 DMPKQ09013 629 aa21.58■■□□□ 1.05
POLR2J3-220ENST00000613744 ZIK1Q3SY52 487 aaPredicted RBP21.58■■□□□ 1.05
POLR2J3-220ENST00000613744 SYPL2Q5VXT5 272 aa21.58■■□□□ 1.05
POLR2J3-220ENST00000613744 BHLHA9Q7RTU4 235 aa21.58■■□□□ 1.05
POLR2J3-220ENST00000613744 BNIPLQ7Z465 357 aa21.58■■□□□ 1.05
POLR2J3-220ENST00000613744 CLEC4FQ8N1N0 589 aa21.58■■□□□ 1.05
POLR2J3-220ENST00000613744 OR7G1Q8NGA0 311 aa21.58■■□□□ 1.05
POLR2J3-220ENST00000613744 FBXO32Q969P5 355 aa21.58■■□□□ 1.05
POLR2J3-220ENST00000613744 VPS33AQ96AX1 596 aa21.58■■□□□ 1.05
POLR2J3-220ENST00000613744 SDCCAG3Q96C92 435 aa21.58■■□□□ 1.05
POLR2J3-220ENST00000613744 ERLEC1Q96DZ1 483 aa21.58■■□□□ 1.05
POLR2J3-220ENST00000613744 DGCR6LQ9BY27 220 aa21.58■■□□□ 1.05
POLR2J3-220ENST00000613744 TP63Q9H3D4 680 aaPredicted RBP21.58■■□□□ 1.05
POLR2J3-220ENST00000613744 CYP4F12Q9HCS2 524 aa21.58■■□□□ 1.05
POLR2J3-220ENST00000613744 ZNF334Q9HCZ1 680 aaPredicted RBP21.58■■□□□ 1.05
POLR2J3-220ENST00000613744 COX16Q9P0S2 106 aa21.58■■□□□ 1.05
POLR2J3-220ENST00000613744 PCDHGA8Q9Y5G5 932 aa21.58■■□□□ 1.05
POLR2J3-220ENST00000613744 GREB1Q4ZG55 1949 aa21.58■■□□□ 1.04
POLR2J3-220ENST00000613744 TTC34A8MYJ7 566 aa21.57■■□□□ 1.04
POLR2J3-220ENST00000613744 DAB1O75553 588 aa21.57■■□□□ 1.04
POLR2J3-220ENST00000613744 PTTG1O95997 202 aa21.57■■□□□ 1.04
POLR2J3-220ENST00000613744 IL7RP16871 459 aa21.57■■□□□ 1.04
POLR2J3-220ENST00000613744 LBPP18428 481 aa21.57■■□□□ 1.04
POLR2J3-220ENST00000613744 PAMP19021 973 aa21.57■■□□□ 1.04
POLR2J3-220ENST00000613744 NFKB1P19838 968 aa21.57■■□□□ 1.04
POLR2J3-220ENST00000613744 KCNA5P22460 613 aa21.57■■□□□ 1.04
POLR2J3-220ENST00000613744 KRT6CP48668 564 aa21.57■■□□□ 1.04
POLR2J3-220ENST00000613744 DLX2Q07687 328 aaPredicted RBP21.57■■□□□ 1.04
POLR2J3-220ENST00000613744 NFYCQ13952 458 aa21.57■■□□□ 1.04
POLR2J3-220ENST00000613744 OTUD3Q5T2D3 398 aaPredicted RBP21.57■■□□□ 1.04
POLR2J3-220ENST00000613744 PM20D1Q6GTS8 502 aa21.57■■□□□ 1.04
POLR2J3-220ENST00000613744 SVOPQ8N4V2 548 aa21.57■■□□□ 1.04
POLR2J3-220ENST00000613744 EFHBQ8N7U6 833 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms