RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 CYP2A6P11509 494 aaPredicted RBP8.66□□□□□ -1.02
TTC28-208ENST00000612946 FMO4P31512 558 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 CYCSP99999 105 aaKnown RBP8.66□□□□□ -1.02
TTC28-208ENST00000612946 HACD2Q6Y1H2 254 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 KBTBD6Q86V97 674 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 S100A16Q96FQ6 103 aaKnown RBP8.66□□□□□ -1.02
TTC28-208ENST00000612946 SECISBP2Q96T21 854 aaKnown RBP8.66□□□□□ -1.02
TTC28-208ENST00000612946 POTEKPQ9BYX7 375 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 ASB7Q9H672 318 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 ARHGEF4Q9NR80 690 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 NR2E3Q9Y5X4 410 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 PRORSD1PA6NEY8 169 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 PRSS44E7EML9 344 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 LRRTM2O43300 516 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 RAB36O95755 333 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 GMCL1P1Q8NEA9 526 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 REPS2Q8NFH8 660 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 PPP1R16AQ96I34 528 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 TMEM209Q96SK2 561 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 VRK1Q99986 396 aaPredicted RBP8.66□□□□□ -1.02
TTC28-208ENST00000612946 POLR1EQ9GZS1 481 aaKnown RBP8.66□□□□□ -1.02
TTC28-208ENST00000612946 TUBB1Q9H4B7 451 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 ABCB9Q9NP78 766 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 OAZ3Q9UMX2 235 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 KIF13BQ9NQT8 1826 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 ARPC2O15144 300 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 UBA1P22314 1058 aaKnown RBP8.66□□□□□ -1.02
TTC28-208ENST00000612946 SLC1A5Q15758 541 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 GRK1Q15835 563 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 C10orf62Q5T681 223 aaPredicted RBP8.66□□□□□ -1.02
TTC28-208ENST00000612946 RNASEH2BQ5TBB1 312 aaKnown RBP8.66□□□□□ -1.02
TTC28-208ENST00000612946 NCEH1Q6PIU2 408 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 CYP20A1Q6UW02 462 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 ZNF730Q6ZMV8 503 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 METTL4Q8N3J2 472 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 SHC3Q92529 594 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 KCNS3Q9BQ31 491 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 TSR3Q9UJK0 312 aaKnown RBP8.66□□□□□ -1.02
TTC28-208ENST00000612946 SALL3Q9BXA9 1300 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 HBP1O60381 514 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 TYMPP19971 482 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 PDHA2P29803 388 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 NOMO3P69849 1222 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 PLD1Q13393 1074 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 MTM1Q13496 603 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 NOMO1Q15155 1222 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 GK5Q6ZS86 529 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 GLT6D1Q7Z4J2 308 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 MED8Q96G25 268 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 FEM1AQ9BSK4 669 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 RFPL3O75679 317 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 UCHL1P09936 223 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 CSTF2P33240 577 aaKnown RBP eCLIP8.66□□□□□ -1.02
TTC28-208ENST00000612946 GPSM2P81274 684 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 SLC10A7Q0GE19 358 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 ATP13A4Q4VNC1 1196 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 OR2T5Q6IEZ7 315 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 SMIM15Q7Z3B0 74 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 ANKFN1Q8N957 763 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 OR2T29Q8NH02 315 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 PI4K2AQ9BTU6 479 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 TCF7L1Q9HCS4 588 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 TRBC1P01850 177 aa8.65□□□□□ -1.02
TTC28-208ENST00000612946 NELFEP18615 380 aaKnown RBP8.65□□□□□ -1.02
TTC28-208ENST00000612946 RPL38P63173 70 aaKnown RBP8.65□□□□□ -1.02
TTC28-208ENST00000612946 C2orf80Q0P641 193 aa8.65□□□□□ -1.02
TTC28-208ENST00000612946 ZNF782Q6ZMW2 699 aaPredicted RBP8.65□□□□□ -1.02
TTC28-208ENST00000612946 SPATA22Q8NHS9 363 aa8.65□□□□□ -1.02
TTC28-208ENST00000612946 NECAB3Q96P71 396 aaPredicted RBP8.65□□□□□ -1.02
TTC28-208ENST00000612946 BTBD1Q9H0C5 482 aa8.65□□□□□ -1.02
TTC28-208ENST00000612946 SEMA4BQ9NPR2 832 aaPredicted RBP8.65□□□□□ -1.02
TTC28-208ENST00000612946 NUP205Q92621 2012 aa8.65□□□□□ -1.02
TTC28-208ENST00000612946 H7C4K7 107 aa8.65□□□□□ -1.02
TTC28-208ENST00000612946 J3QRK9 145 aa8.65□□□□□ -1.02
TTC28-208ENST00000612946 FPGTO14772 594 aa8.65□□□□□ -1.02
TTC28-208ENST00000612946 EN1Q05925 392 aaPredicted RBP8.65□□□□□ -1.02
TTC28-208ENST00000612946 MFSD10Q14728 455 aa8.65□□□□□ -1.02
TTC28-208ENST00000612946 TDRD10Q5VZ19 366 aaKnown RBP8.65□□□□□ -1.02
TTC28-208ENST00000612946 CXorf57Q6NSI4 855 aaKnown RBP8.65□□□□□ -1.02
TTC28-208ENST00000612946 SV2AQ7L0J3 742 aa8.65□□□□□ -1.02
TTC28-208ENST00000612946 NSUN4Q96CB9 384 aaKnown RBP8.65□□□□□ -1.02
TTC28-208ENST00000612946 FBXL8Q96CD0 374 aa8.65□□□□□ -1.02
TTC28-208ENST00000612946 SMURF1Q9HCE7 757 aa8.65□□□□□ -1.02
TTC28-208ENST00000612946 STK25O00506 426 aa8.65□□□□□ -1.02
TTC28-208ENST00000612946 PIAS4Q8N2W9 510 aaPredicted RBP8.65□□□□□ -1.02
TTC28-208ENST00000612946 SLC7A6OSQ96CW6 309 aaPredicted RBP8.65□□□□□ -1.02
TTC28-208ENST00000612946 SLC41A3Q96GZ6 507 aa8.65□□□□□ -1.02
TTC28-208ENST00000612946 POLR2J2Q9GZM3 115 aaKnown RBP8.65□□□□□ -1.02
TTC28-208ENST00000612946 IL20Q9NYY1 176 aa8.65□□□□□ -1.02
TTC28-208ENST00000612946 VPS28Q9UK41 221 aa8.65□□□□□ -1.02
TTC28-208ENST00000612946 ARF3P61204 181 aaPredicted RBP8.65□□□□□ -1.02
TTC28-208ENST00000612946 ARF1P84077 181 aaKnown RBP8.65□□□□□ -1.02
TTC28-208ENST00000612946 CBFBQ13951 182 aa8.65□□□□□ -1.02
TTC28-208ENST00000612946 TAS1R2Q8TE23 839 aa8.65□□□□□ -1.02
TTC28-208ENST00000612946 ALG3Q92685 438 aa8.65□□□□□ -1.02
TTC28-208ENST00000612946 ZNF282Q9UDV7 671 aaPredicted RBP8.65□□□□□ -1.02
TTC28-208ENST00000612946 SEC14L3Q9UDX4 400 aa8.65□□□□□ -1.02
TTC28-208ENST00000612946 SRRDQ9UH36 339 aa8.65□□□□□ -1.02
TTC28-208ENST00000612946 EGFL7Q9UHF1 273 aa8.65□□□□□ -1.02
TTC28-208ENST00000612946 ASXL3Q9C0F0 2248 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms