RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130	TMEM236	Q5W0B7	351 aa		13.52	□□□□□ -0.24
UBE2F-223	ENST00000612130	TUBA3E	Q6PEY2	450 aa		13.52	□□□□□ -0.24
UBE2F-223	ENST00000612130	AFTPH	Q6ULP2	937 aa		13.52	□□□□□ -0.24
UBE2F-223	ENST00000612130	B3GNT8	Q7Z7M8	397 aa		13.52	□□□□□ -0.24
UBE2F-223	ENST00000612130	GPR149	Q86SP6	731 aa		13.52	□□□□□ -0.24
UBE2F-223	ENST00000612130	AKAP14	Q86UN6	197 aa		13.52	□□□□□ -0.24
UBE2F-223	ENST00000612130	ZNF683	Q8IZ20	524 aa		13.52	□□□□□ -0.24
UBE2F-223	ENST00000612130	PGBD5	Q8N414	524 aa		13.52	□□□□□ -0.24
UBE2F-223	ENST00000612130	CNIH3	Q8TBE1	160 aa		13.52	□□□□□ -0.24
UBE2F-223	ENST00000612130	C17orf50	Q8WW18	174 aa		13.52	□□□□□ -0.24
UBE2F-223	ENST00000612130	PSMG2	Q969U7	264 aa		13.52	□□□□□ -0.24
UBE2F-223	ENST00000612130	ZBTB18	Q99592	522 aa		13.52	□□□□□ -0.24
UBE2F-223	ENST00000612130	PKMYT1	Q99640	499 aa		13.52	□□□□□ -0.24
UBE2F-223	ENST00000612130	GPR21	Q99679	349 aa		13.52	□□□□□ -0.24
UBE2F-223	ENST00000612130	ZYG11B	Q9C0D3	744 aa		13.52	□□□□□ -0.24
UBE2F-223	ENST00000612130	POLR1E	Q9GZS1	481 aa	Known RBP	13.52	□□□□□ -0.24
UBE2F-223	ENST00000612130	GABARAPL1	Q9H0R8	117 aa		13.52	□□□□□ -0.24
UBE2F-223	ENST00000612130	MOV10	Q9HCE1	1003 aa	Known RBP	13.52	□□□□□ -0.24
UBE2F-223	ENST00000612130	SCN3B	Q9NY72	215 aa		13.52	□□□□□ -0.24
UBE2F-223	ENST00000612130	ERVK-18	Q9QC07	812 aa		13.52	□□□□□ -0.24
UBE2F-223	ENST00000612130	FAM47E-STBD1	D6RA91	191 aa		13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	PRMT5	O14744	637 aa	Predicted RBP	13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	UPK1B	O75841	260 aa		13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	TH	P07101	528 aa		13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	ALDH4A1	P30038	563 aa		13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	CD6	P30203	668 aa		13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	AKT1	P31749	480 aa		13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	ALDH7A1	P49419	539 aa	Known RBP	13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	ERVPABLB-1	P60509	514 aa		13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	IL10RB	Q08334	325 aa		13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	PTPRCAP	Q14761	206 aa		13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	CLCA4	Q14CN2	919 aa		13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	NR6A1	Q15406	480 aa		13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	NPTX1	Q15818	432 aa		13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	ZNF181	Q2M3W8	571 aa		13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	ANKRD34A	Q69YU3	496 aa		13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	CAPN13	Q6MZZ7	669 aa	Predicted RBP	13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	TMEM179B	Q7Z7N9	219 aa		13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	MICU2	Q8IYU8	434 aa		13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	KIAA1958	Q8N8K9	716 aa		13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	OR10A6	Q8NH74	314 aa		13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	ERLEC1	Q96DZ1	483 aa		13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	KAT8	Q9H7Z6	458 aa	Known RBP	13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	PCDH12	Q9NPG4	1184 aa		13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	DCAF13	Q9NV06	445 aa	Known RBP	13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	NLE1	Q9NVX2	485 aa	Predicted RBP	13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	OSGIN1	Q9UJX0	560 aa		13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	VPS9D1	Q9Y2B5	631 aa		13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	UGT2A1	Q9Y4X1	527 aa		13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	POLR3H	Q9Y535	204 aa	Predicted RBP	13.52	□□□□□ -0.25
UBE2F-223	ENST00000612130	GBF1	Q92538	1859 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	FAM220BP	B1ANY3	271 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	TAF4	O00268	1085 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	VPS26A	O75436	327 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	TSPAN12	O95859	305 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	GSN	P06396	782 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	CD9	P21926	228 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	IGFBP5	P24593	272 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	FMO4	P31512	558 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	RPL9	P32969	192 aa	Known RBP	13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	PBX3	P40426	434 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	HUNK	P57058	714 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	PHC1	P78364	1004 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	ADAM17	P78536	824 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	MAPK11	Q15759	364 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	ATAD3B	Q5T9A4	648 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	THOC7	Q6I9Y2	204 aa	Known RBP	13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	LETMD1	Q6P1Q0	360 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	IL27RA	Q6UWB1	636 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	LRRC8D	Q7L1W4	858 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	SCD5	Q86SK9	330 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	METTL23	Q86XA0	190 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	GPSM1	Q86YR5	675 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	ABI1	Q8IZP0	508 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	FRS2	Q8WU20	508 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	GTF2H4	Q92759	462 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	TBC1D20	Q96BZ9	403 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	CDKN2AIPNL	Q96HQ2	116 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	PPP3R2	Q96LZ3	170 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	SEMA3C	Q99985	751 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	THUMPD3	Q9BV44	507 aa	Known RBP	13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	EXD2	Q9NVH0	621 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	CD274	Q9NZQ7	290 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	UTS2R	Q9UKP6	389 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	TLR6	Q9Y2C9	796 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	CLDN24	A6NM45	220 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	AREL1	O15033	823 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	MAN1A2	O60476	641 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	NDUFS3	O75489	264 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	RECQL5	O94762	991 aa	Predicted RBP	13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	PSMB9	P28065	219 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	MAP2K4	P45985	399 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	MASP1	P48740	699 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	HTR6	P50406	440 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	ZNF140	P52738	457 aa	Predicted RBP	13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	HK3	P52790	923 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	NCS1	P62166	190 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	LSM3	P62310	102 aa	Known RBP	13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms