RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 SERGEFQ9UGK8 458 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ZDHHC2Q9UIJ5 367 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ZFR2Q9UPR6 939 aaKnown RBP12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 PCM1Q15154 2024 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 SZT2Q5T011 3432 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ANTXRLA6NF34 631 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 MGAT4DA6NG13 374 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 LRRC72A6NJI9 287 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 OR2AG2A6NM03 316 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 K7ESM1 405 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 GIPC1O14908 333 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 NARSO43776 548 aaKnown RBP12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 RNGTTO60942 597 aaKnown RBP12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 VPS4BO75351 444 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 KATNA1O75449 491 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 UBOX5O94941 541 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 UNC5CO95185 931 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 CATP04040 527 aaKnown RBP12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ENO1P06733 434 aaKnown RBP12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 KITP10721 976 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 CHRNB1P11230 501 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ITGB6P18564 788 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 NDUFV2P19404 249 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 RPIAP49247 311 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 CTSCP53634 463 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 KIAA1024LP59773 190 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 HSPA14Q0VDF9 509 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 BOP1Q14137 746 aaKnown RBP12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 IRF4Q15306 451 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 KANK2Q63ZY3 851 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 TMEM220Q6QAJ8 160 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 UNC5DQ6UXZ4 953 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 UBE2R2Q712K3 238 aaPredicted RBP12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 DET1Q7L5Y6 550 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 LRRC70Q7Z2Q7 622 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 MTDHQ86UE4 582 aaKnown RBP12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 LRRTM4Q86VH4 590 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 HEATR4Q86WZ0 1026 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 OR2T34Q8NGX1 318 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 OR14C36Q8NHC7 312 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 FAM174AQ8TBP5 190 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 EXT2Q93063 718 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 FBXL8Q96CD0 374 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 TIMM29Q9BSF4 260 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 IER2Q9BTL4 223 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 SLC17A9Q9BYT1 436 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 OSBPL6Q9BZF3 934 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 CHRDQ9H2X0 955 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 TCF7L2Q9NQB0 619 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ARHGEF3Q9NR81 526 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ATXN10Q9UBB4 475 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 LNPEPQ9UIQ6 1025 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 TRAF6Q9Y4K3 522 aa12.04□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 CEP192Q8TEP8 1941 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 A0A1W2PQU0 124 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 FCHO1O14526 889 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 AZIN1O14977 448 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 KMOO15229 486 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 INPP4BO15327 924 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 LATO43561 262 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 MTX2O75431 263 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 DNAJC8O75937 253 aaPredicted RBP12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 FSBPO95073 299 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 SIX3O95343 332 aaPredicted RBP12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 OTCP00480 354 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 UROSP10746 265 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 PCSK2P16519 638 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 GABRG2P18507 467 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 AOC1P19801 751 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 PRDX6P30041 224 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 OXTRP30559 389 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 PCDH1Q08174 1060 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 PHKG1Q16816 387 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 TRAPPC5Q8IUR0 188 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 UBALD2Q8IYN6 164 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 PELI3Q8N2H9 469 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 PHC3Q8NDX5 983 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 CEP70Q8NHQ1 597 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 MAGEC3Q8TD91 643 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 GANCQ8TET4 914 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 THOC1Q96FV9 657 aaKnown RBP12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 SCARF2Q96GP6 870 aaPredicted RBP12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 RILPQ96NA2 401 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 NTMT1Q9BV86 223 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 CD244Q9BZW8 370 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 BTBD1Q9H0C5 482 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 OR2AG1Q9H205 316 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ITM2CQ9NQX7 267 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ADAMTS6Q9UKP5 1117 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 PDE10AQ9Y233 779 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ST14Q9Y5Y6 855 aa12.03□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 TCRBV21S2A2A0A5A6 115 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 CFAP73A6NFT4 308 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 CAPN14A8MX76 684 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 H3BM21 787 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 K7EPI3 171 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 UBFD1O14562 309 aaKnown RBP12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 HGSO14964 777 aaPredicted RBP12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 UGDHO60701 494 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 DIAPH2O60879 1101 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms