RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 PHKG1Q16816 387 aa17.3■□□□□ 0.36
SHKBP1-224ENST00000600718 ZNF658BQ4V348 819 aaPredicted RBP17.3■□□□□ 0.36
SHKBP1-224ENST00000600718 Q6ZS52 159 aa17.3■□□□□ 0.36
SHKBP1-224ENST00000600718 SYT13Q7L8C5 426 aa17.3■□□□□ 0.36
SHKBP1-224ENST00000600718 MTDHQ86UE4 582 aaKnown RBP17.3■□□□□ 0.36
SHKBP1-224ENST00000600718 STON2Q8WXE9 905 aa17.3■□□□□ 0.36
SHKBP1-224ENST00000600718 SKA1Q96BD8 255 aa17.3■□□□□ 0.36
SHKBP1-224ENST00000600718 WDR26Q9H7D7 661 aa17.3■□□□□ 0.36
SHKBP1-224ENST00000600718 PHPT1Q9NRX4 125 aaPredicted RBP17.3■□□□□ 0.36
SHKBP1-224ENST00000600718 TMEM98Q9Y2Y6 226 aa17.3■□□□□ 0.36
SHKBP1-224ENST00000600718 ATG2BQ96BY7 2078 aa17.3■□□□□ 0.36
SHKBP1-224ENST00000600718 GPR89AB7ZAQ6 455 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 UBFD1O14562 309 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 CHUKO15111 745 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 POP7O75817 140 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 MLYCDO95822 493 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 FGF4P08620 206 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 GPR89BP0CG08 455 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 TARSP26639 723 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 SERPINB3P29508 390 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 RPIAP49247 311 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 CCR3P51677 355 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 PLOD1Q02809 727 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 ZP2Q05996 745 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 GALNTL6Q49A17 601 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 LACTB2Q53H82 288 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 METTL2BQ6P1Q9 378 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 RASGRP3Q8IV61 690 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 OR2T34Q8NGX1 318 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 HMGB4Q8WW32 186 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 NELL2Q99435 816 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 EGFL8Q99944 293 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 EBF4Q9BQW3 602 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 LGR4Q9BXB1 951 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 BTBD1Q9H0C5 482 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 CXorf56Q9H5V9 222 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 SGK2Q9HBY8 427 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 PCTPQ9UKL6 214 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 FBXL21Q9UKT6 434 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 PDE10AQ9Y233 779 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 TRAF6Q9Y4K3 522 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 DNMT3AQ9Y6K1 912 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 LRRC72A6NJI9 287 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 HGSO14964 777 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 CCDC22O60826 627 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 MATN4O95460 622 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 GUCA1CO95843 209 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 ANXA5P08758 320 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 HIST1H2AGP0C0S8 130 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 HIST1H2ADP20671 130 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 CYP2A7P20853 494 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 PBLDP30039 288 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 LCP2Q13094 533 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 SPDYAQ5MJ70 313 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 TRIM69Q86WT6 500 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 ZNF547Q8IVP9 402 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 CFAP206Q8IYR0 622 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 SLC22A15Q8IZD6 547 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 FLCNQ8NFG4 579 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 MCOLN3Q8TDD5 553 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 HIST1H2AHQ96KK5 128 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 NSUN5Q96P11 429 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 HIST1H2AJQ99878 128 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 H2AFJQ9BTM1 129 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 MYLK2Q9H1R3 596 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 PRDM6Q9NQX0 595 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 USP36Q9P275 1121 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 ZFP69BQ9UJL9 534 aa17.29■□□□□ 0.36
SHKBP1-224ENST00000600718 PIKFYVEQ9Y2I7 2098 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 KRBA1A5PL33 1030 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 PABPN1LA6NDY0 278 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 MGAT4DA6NG13 374 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 TRPC5OSA6NMA1 111 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 E2F3O00716 465 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 DIAPH2O60879 1101 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 TSPAN8P19075 237 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 SH3BP2P78314 561 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 ACTN3Q08043 901 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 TTC23LQ6PF05 361 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 CLYBLQ8N0X4 340 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 PGBD3Q8N328 593 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 OR56A4Q8NGH8 313 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 OR2L2Q8NH16 312 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 TRPC4APQ8TEL6 797 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 UBTD2Q8WUN7 234 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 RHBDF1Q96CC6 855 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 ERP27Q96DN0 273 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 HGH1Q9BTY7 390 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 LTB4R2Q9NPC1 389 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 FAM8A1Q9UBU6 413 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 KANSL1LA0AUZ9 987 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 TAPBPO15533 448 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 UBOX5O94941 541 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 IGLV3-19P01714 112 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 MYCLP1P12525 358 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 MAT2AP31153 395 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 ACSL1P33121 698 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 AP1S2P56377 157 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 PPP2CBP62714 309 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 PPP2CAP67775 309 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms