RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 RPIAP49247 311 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 SERPINB8P50452 374 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 RAB10P61026 200 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 BIRC2Q13490 618 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 KIR2DS5Q14953 304 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 ACSBG2Q5FVE4 666 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 STPG1Q5TH74 334 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 LRRC8EQ6NSJ5 796 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 IYDQ6PHW0 289 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 PAQR3Q6TCH7 311 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 XKR5Q6UX68 686 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 DBX2Q6ZNG2 339 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 RAPH1Q70E73 1250 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 PDZD3Q86UT5 571 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 TDRPQ86YL5 185 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 TRIM48Q8IWZ4 208 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 CPNE9Q8IYJ1 553 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 KIAA2013Q8IYS2 634 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 SLC22A15Q8IZD6 547 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 RIBC1Q8N443 379 aaPredicted RBP13.33□□□□□ -0.28
VMP1-210ENST00000589823 ARL10Q8N8L6 244 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 GIMAP7Q8NHV1 300 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 EPS8L3Q8TE67 593 aaKnown RBP13.33□□□□□ -0.28
VMP1-210ENST00000589823 C12orf66Q96MD2 445 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 STN1Q9H668 368 aaKnown RBP13.33□□□□□ -0.28
VMP1-210ENST00000589823 GPAMQ9HCL2 828 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 EVA1BQ9NVM1 165 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 NCKIPSDQ9NZQ3 722 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 TBK1Q9UHD2 729 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 CDYLQ9Y232 598 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 PIKFYVEQ9Y2I7 2098 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 TRBV23OR9-2A0A075B6M9 112 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 A6NCN8 305 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 TRIM49D1C9J1S8 452 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 EIF3FO00303 357 aaPredicted RBP13.32□□□□□ -0.28
VMP1-210ENST00000589823 TRIM38O00635 465 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 CDH16O75309 829 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 EML2O95834 649 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 CD59P13987 128 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 BRAFP15056 766 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 TYK2P29597 1187 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 HOXD11P31277 338 aaPredicted RBP13.32□□□□□ -0.28
VMP1-210ENST00000589823 LIMK1P53667 647 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 IL2P60568 153 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 TIAL1Q01085 375 aaKnown RBP eCLIP13.32□□□□□ -0.28
VMP1-210ENST00000589823 DNAJC3Q13217 504 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 KRT33BQ14525 404 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 GBX1Q14549 363 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 CLCA4Q14CN2 919 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 RASA2Q15283 850 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 TAF1BQ53T94 588 aaPredicted RBP13.32□□□□□ -0.28
VMP1-210ENST00000589823 CAPRIN2Q6IMN6 1127 aaKnown RBP13.32□□□□□ -0.28
VMP1-210ENST00000589823 OGFOD3Q6PK18 319 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 SLC9B2Q86UD5 537 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 VRK3Q8IV63 474 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 CEP97Q8IW35 865 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 NAXDQ8IW45 347 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 NAGSQ8N159 534 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 MYO1HQ8N1T3 1032 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 NKAPQ8N5F7 415 aaKnown RBP13.32□□□□□ -0.28
VMP1-210ENST00000589823 AVL9Q8NBF6 648 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 MAPK15Q8TD08 544 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 RHBDD1Q8TEB9 315 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 CXorf40BQ96DE9 158 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 RMDN2Q96LZ7 410 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 FOPNLQ96NB1 174 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 OR52A5Q9H2C5 316 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 IMP3Q9NV31 184 aaKnown RBP13.32□□□□□ -0.28
VMP1-210ENST00000589823 TSR3Q9UJK0 312 aaKnown RBP13.32□□□□□ -0.28
VMP1-210ENST00000589823 TLK1Q9UKI8 766 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 WDR37Q9Y2I8 494 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 HEBP2Q9Y5Z4 205 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 FRYLO94915 3013 aa13.32□□□□□ -0.28
VMP1-210ENST00000589823 ZFHX2Q9C0A1 2572 aaPredicted RBP13.31□□□□□ -0.28
VMP1-210ENST00000589823 HMX2A2RU54 273 aa13.31□□□□□ -0.28
VMP1-210ENST00000589823 OR52A4PA6NMU1 304 aa13.31□□□□□ -0.28
VMP1-210ENST00000589823 PHGDHO43175 533 aaKnown RBP13.31□□□□□ -0.28
VMP1-210ENST00000589823 SIGLEC6O43699 453 aa13.31□□□□□ -0.28
VMP1-210ENST00000589823 SH3BP5O60239 455 aa13.31□□□□□ -0.28
VMP1-210ENST00000589823 NOBOXO60393 691 aa13.31□□□□□ -0.28
VMP1-210ENST00000589823 LDOC1O95751 146 aaPredicted RBP13.31□□□□□ -0.28
VMP1-210ENST00000589823 VIPP01282 170 aa13.31□□□□□ -0.28
VMP1-210ENST00000589823 RPN2P04844 631 aa13.31□□□□□ -0.28
VMP1-210ENST00000589823 MPC1LP0DKB6 136 aa13.31□□□□□ -0.28
VMP1-210ENST00000589823 MTHFD1P11586 935 aaKnown RBP13.31□□□□□ -0.28
VMP1-210ENST00000589823 ZNF37AP17032 561 aaPredicted RBP13.31□□□□□ -0.28
VMP1-210ENST00000589823 NDUFS1P28331 727 aa13.31□□□□□ -0.28
VMP1-210ENST00000589823 MAPK9P45984 424 aa13.31□□□□□ -0.28
VMP1-210ENST00000589823 PGGT1BP53609 377 aa13.31□□□□□ -0.28
VMP1-210ENST00000589823 DAB2P98082 770 aa13.31□□□□□ -0.28
VMP1-210ENST00000589823 ABRQ12979 859 aa13.31□□□□□ -0.28
VMP1-210ENST00000589823 ZNF460Q14592 562 aa13.31□□□□□ -0.28
VMP1-210ENST00000589823 CASP8Q14790 479 aa13.31□□□□□ -0.28
VMP1-210ENST00000589823 NR0B2Q15466 257 aa13.31□□□□□ -0.28
VMP1-210ENST00000589823 ZKSCAN8Q15776 578 aaPredicted RBP13.31□□□□□ -0.28
VMP1-210ENST00000589823 RPE65Q16518 533 aa13.31□□□□□ -0.28
VMP1-210ENST00000589823 KRT71Q3SY84 523 aa13.31□□□□□ -0.28
VMP1-210ENST00000589823 C14orf28Q4W4Y0 310 aa13.31□□□□□ -0.28
VMP1-210ENST00000589823 FBXO38Q6PIJ6 1188 aa13.31□□□□□ -0.28
VMP1-210ENST00000589823 LRIG3Q6UXM1 1119 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 1255.5 ms