RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 WNT16Q9UBV4 365 aa11.18□□□□□ -0.62
SMAD4-205ENST00000588745 VTI1BQ9UEU0 232 aa11.18□□□□□ -0.62
SMAD4-205ENST00000588745 EIF2B4Q9UI10 523 aaKnown RBP11.18□□□□□ -0.62
SMAD4-205ENST00000588745 FBXL21Q9UKT6 434 aa11.18□□□□□ -0.62
SMAD4-205ENST00000588745 TNPO3Q9Y5L0 923 aaKnown RBP11.18□□□□□ -0.62
SMAD4-205ENST00000588745 NUMA1Q14980 2115 aa11.18□□□□□ -0.62
SMAD4-205ENST00000588745 C17orf113A0A1B0GUU1 675 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 KANSL1LA0AUZ9 987 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 PABPN1LA6NDY0 278 aaKnown RBP11.17□□□□□ -0.62
SMAD4-205ENST00000588745 LRRC72A6NJI9 287 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 TMEM233B4DJY2 109 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 GPR89AB7ZAQ6 455 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 GFYI3L273 518 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 UBFD1O14562 309 aaKnown RBP11.17□□□□□ -0.62
SMAD4-205ENST00000588745 HGSO14964 777 aaPredicted RBP11.17□□□□□ -0.62
SMAD4-205ENST00000588745 CHUKO15111 745 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 GRID2O43424 1007 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 GPR89BP0CG08 455 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 MYCLP1P12525 358 aaPredicted RBP11.17□□□□□ -0.62
SMAD4-205ENST00000588745 TSPAN8P19075 237 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 SERPINB3P29508 390 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 MAT2AP31153 395 aaKnown RBP11.17□□□□□ -0.62
SMAD4-205ENST00000588745 ACSL1P33121 698 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 MAPK9P45984 424 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 PREPP48147 710 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 IDH3AP50213 366 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 CDH13P55290 713 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 STARD6P59095 220 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 TUBB3Q13509 450 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 UBXN2BQ14CS0 331 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 FBXO48Q5FWF7 155 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 CDKL4Q5MAI5 379 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 VWA5B1Q5TIE3 1220 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 SULT1C3Q6IMI6 304 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 CRTC3Q6UUV7 619 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 EPGNQ6UW88 154 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 MTDHQ86UE4 582 aaKnown RBP11.17□□□□□ -0.62
SMAD4-205ENST00000588745 ALYREFQ86V81 257 aaKnown RBP11.17□□□□□ -0.62
SMAD4-205ENST00000588745 RASGRP3Q8IV61 690 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 OXR1Q8N573 874 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 LILRA3Q8N6C8 439 aaPredicted RBP11.17□□□□□ -0.62
SMAD4-205ENST00000588745 HM13Q8TCT9 377 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 MAPK15Q8TD08 544 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 TRPC4APQ8TEL6 797 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 AGAP11Q8TF27 550 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 FOXJ1Q92949 421 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 RHBDF1Q96CC6 855 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 FAR2Q96K12 515 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 TMEM79Q9BSE2 394 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 LGR4Q9BXB1 951 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 PARVBQ9HBI1 364 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 SGK2Q9HBY8 427 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 SEMA4BQ9NPR2 832 aaPredicted RBP11.17□□□□□ -0.62
SMAD4-205ENST00000588745 ITM2CQ9NQX7 267 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 WWOXQ9NZC7 414 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 GULP1Q9UBP9 304 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 ZFP69BQ9UJL9 534 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 PDE10AQ9Y233 779 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 APOBEC2Q9Y235 224 aaKnown RBP11.17□□□□□ -0.62
SMAD4-205ENST00000588745 TMEM98Q9Y2Y6 226 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 ASB1Q9Y576 335 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 OR1A2Q9Y585 309 aa11.17□□□□□ -0.62
SMAD4-205ENST00000588745 MGAT4DA6NG13 374 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 C19orf67A6NJJ6 358 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 E2F3O00716 465 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 TAPBPO15533 448 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 DIAPH2O60879 1101 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 PSIP1O75475 530 aaKnown RBP11.16□□□□□ -0.62
SMAD4-205ENST00000588745 UBOX5O94941 541 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 MATN4O95460 622 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 MLYCDO95822 493 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 GUCA1CO95843 209 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 IGLV3-19P01714 112 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 ANXA5P08758 320 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 HIST1H2AGP0C0S8 130 aaPredicted RBP11.16□□□□□ -0.62
SMAD4-205ENST00000588745 HIST1H2ADP20671 130 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 RPIAP49247 311 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 CCR3P51677 355 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 AP1S2P56377 157 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 ARHGAP8P85298 464 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 FZD5Q13467 585 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 GAS6Q14393 721 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 PDCD2Q16342 344 aaPredicted RBP11.16□□□□□ -0.62
SMAD4-205ENST00000588745 PLA2G4EQ3MJ16 856 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 SLC9B1Q4ZJI4 515 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 LACTB2Q53H82 288 aaPredicted RBP11.16□□□□□ -0.62
SMAD4-205ENST00000588745 SPDYAQ5MJ70 313 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 ANO7Q6IWH7 933 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 METTL2BQ6P1Q9 378 aaKnown RBP11.16□□□□□ -0.62
SMAD4-205ENST00000588745 XKR5Q6UX68 686 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 MBOAT1Q6ZNC8 495 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 C11orf96Q7Z7L8 435 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 LRRTM4Q86VH4 590 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 PGBD3Q8N328 593 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 TCAIMQ8N3R3 496 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 TSTD1Q8NFU3 115 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 OR56A4Q8NGH8 313 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 OR2L2Q8NH16 312 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 ESAMQ96AP7 390 aa11.16□□□□□ -0.62
SMAD4-205ENST00000588745 HIST1H2AHQ96KK5 128 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms